RNA–Protein interactions for RNA: ENST00000427566.2

CLK3P2-201, Transcript of CDC like kinase 3 pseudogene 2, humanhuman

BASIC

Gene CLK3P2, Length 1,453 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3P2-201ENST00000427566 SLC4A2P04920 1241 aa20.13■□□□□ 0.81
CLK3P2-201ENST00000427566 ANKRD13DQ6ZTN6 518 aa20.13■□□□□ 0.81
CLK3P2-201ENST00000427566 ZBED9Q6R2W3 1325 aa20.13■□□□□ 0.81
CLK3P2-201ENST00000427566 PARP10Q53GL7 1025 aa20.12■□□□□ 0.81
CLK3P2-201ENST00000427566 STK31Q9BXU1 1019 aa20.12■□□□□ 0.81
CLK3P2-201ENST00000427566 ABCC12Q96J65 1359 aa20.12■□□□□ 0.81
CLK3P2-201ENST00000427566 SRGNP10124 158 aa20.11■□□□□ 0.81
CLK3P2-201ENST00000427566 PLBD2Q8NHP8 589 aa20.11■□□□□ 0.81
CLK3P2-201ENST00000427566 MASTLQ96GX5 879 aa20.11■□□□□ 0.81
CLK3P2-201ENST00000427566 CHMP4AQ9BY43 222 aa20.11■□□□□ 0.81
CLK3P2-201ENST00000427566 TCIRG1Q13488 830 aa20.11■□□□□ 0.81
CLK3P2-201ENST00000427566 STYK1Q6J9G0 422 aa20.11■□□□□ 0.81
CLK3P2-201ENST00000427566 RIC3Q7Z5B4 369 aa20.11■□□□□ 0.81
CLK3P2-201ENST00000427566 CNKSR1Q969H4 720 aa20.11■□□□□ 0.81
CLK3P2-201ENST00000427566 CACNA1FO60840 1977 aa20.11■□□□□ 0.81
CLK3P2-201ENST00000427566 LAMB2P55268 1798 aa20.1■□□□□ 0.81
CLK3P2-201ENST00000427566 C21orf2O43822 256 aa20.1■□□□□ 0.81
CLK3P2-201ENST00000427566 NTSR2O95665 410 aa20.1■□□□□ 0.81
CLK3P2-201ENST00000427566 UTP14AQ9BVJ6 771 aaKnown RBP20.1■□□□□ 0.81
CLK3P2-201ENST00000427566 NPR1P16066 1061 aa20.09■□□□□ 0.81
CLK3P2-201ENST00000427566 ZNF526Q8TF50 670 aaPredicted RBP20.09■□□□□ 0.81
CLK3P2-201ENST00000427566 IBTKQ9P2D0 1353 aaPredicted RBP20.09■□□□□ 0.81
CLK3P2-201ENST00000427566 ATP5J2-PTCD1G3V325 749 aa20.08■□□□□ 0.81
CLK3P2-201ENST00000427566 RASSF7Q02833 373 aa20.08■□□□□ 0.81
CLK3P2-201ENST00000427566 NLRP10Q86W26 655 aa20.08■□□□□ 0.81
CLK3P2-201ENST00000427566 FER1L6Q2WGJ9 1857 aa20.08■□□□□ 0.8
CLK3P2-201ENST00000427566 FLIIQ13045 1269 aa20.07■□□□□ 0.8
CLK3P2-201ENST00000427566 PRPF40BQ6NWY9 871 aaKnown RBP20.07■□□□□ 0.8
CLK3P2-201ENST00000427566 BCL2L13Q9BXK5 485 aa20.07■□□□□ 0.8
CLK3P2-201ENST00000427566 TRMT112Q9UI30 125 aaKnown RBP20.07■□□□□ 0.8
CLK3P2-201ENST00000427566 C9orf131Q5VYM1 1079 aa20.06■□□□□ 0.8
CLK3P2-201ENST00000427566 SSH1Q8WYL5 1049 aa20.06■□□□□ 0.8
CLK3P2-201ENST00000427566 RPGRQ92834 1020 aaKnown RBP20.06■□□□□ 0.8
CLK3P2-201ENST00000427566 RNF181Q9P0P0 153 aa20.06■□□□□ 0.8
CLK3P2-201ENST00000427566 ADCY9O60503 1353 aa20.06■□□□□ 0.8
CLK3P2-201ENST00000427566 PI4KAP2A4QPH2 592 aa20.05■□□□□ 0.8
CLK3P2-201ENST00000427566 DDX58O95786 925 aaKnown RBP20.05■□□□□ 0.8
CLK3P2-201ENST00000427566 PI4KAP1Q8N8J0 262 aa20.05■□□□□ 0.8
CLK3P2-201ENST00000427566 KLRG2A4D1S0 409 aaPredicted RBP20.05■□□□□ 0.8
CLK3P2-201ENST00000427566 MRPL50Q8N5N7 158 aaKnown RBP20.05■□□□□ 0.8
CLK3P2-201ENST00000427566 NLRP3Q96P20 1036 aa20.05■□□□□ 0.8
CLK3P2-201ENST00000427566 MYD88Q99836 296 aa20.05■□□□□ 0.8
CLK3P2-201ENST00000427566 MAP3K2Q9Y2U5 619 aa20.05■□□□□ 0.8
CLK3P2-201ENST00000427566 DDX60Q8IY21 1712 aaKnown RBP20.04■□□□□ 0.8
CLK3P2-201ENST00000427566 ALDH1B1P30837 517 aa20.04■□□□□ 0.8
CLK3P2-201ENST00000427566 RTL5Q5HYW3 569 aaPredicted RBP20.04■□□□□ 0.8
CLK3P2-201ENST00000427566 KSR2Q6VAB6 950 aa20.04■□□□□ 0.8
CLK3P2-201ENST00000427566 SYNE4Q8N205 404 aa20.04■□□□□ 0.8
CLK3P2-201ENST00000427566 TIAM2Q8IVF5 1701 aa20.04■□□□□ 0.8
CLK3P2-201ENST00000427566 DICER1Q9UPY3 1922 aaKnown RBP20.03■□□□□ 0.8
CLK3P2-201ENST00000427566 TAF1P21675 1872 aa20.03■□□□□ 0.8
CLK3P2-201ENST00000427566 SH3TC1Q8TE82 1336 aa20.03■□□□□ 0.8
CLK3P2-201ENST00000427566 HCLS1P14317 486 aaPredicted RBP20.03■□□□□ 0.8
CLK3P2-201ENST00000427566 FKBP5Q13451 457 aaPredicted RBP20.03■□□□□ 0.8
CLK3P2-201ENST00000427566 ISCA1Q9BUE6 129 aa20.03■□□□□ 0.8
CLK3P2-201ENST00000427566 RIC1Q4ADV7 1423 aa20.02■□□□□ 0.8
CLK3P2-201ENST00000427566 C3orf67Q6ZVT6 689 aa20.02■□□□□ 0.8
CLK3P2-201ENST00000427566 METTL22Q9BUU2 404 aaPredicted RBP20.02■□□□□ 0.8
CLK3P2-201ENST00000427566 GPBP1L1Q9HC44 474 aaPredicted RBP20.02■□□□□ 0.8
CLK3P2-201ENST00000427566 RNF123Q5XPI4 1314 aa20.01■□□□□ 0.79
CLK3P2-201ENST00000427566 F6X3S4 739 aa20.01■□□□□ 0.79
CLK3P2-201ENST00000427566 CRY2Q49AN0 593 aa20.01■□□□□ 0.79
CLK3P2-201ENST00000427566 FAM89AQ96GI7 184 aa20.01■□□□□ 0.79
CLK3P2-201ENST00000427566 RBM17Q96I25 401 aaKnown RBP20.01■□□□□ 0.79
CLK3P2-201ENST00000427566 NFKBIEO00221 500 aa20■□□□□ 0.79
CLK3P2-201ENST00000427566 CT47B1P0C2W7 299 aaPredicted RBP20■□□□□ 0.79
CLK3P2-201ENST00000427566 SLC10A5Q5PT55 438 aa20■□□□□ 0.79
CLK3P2-201ENST00000427566 SOGA3Q5TF21 947 aa20■□□□□ 0.79
CLK3P2-201ENST00000427566 IGKV5-2P06315 115 aa19.99■□□□□ 0.79
CLK3P2-201ENST00000427566 LMNB1P20700 586 aa19.99■□□□□ 0.79
CLK3P2-201ENST00000427566 RARSP54136 660 aaKnown RBP19.99■□□□□ 0.79
CLK3P2-201ENST00000427566 ALDH1L2Q3SY69 923 aa19.99■□□□□ 0.79
CLK3P2-201ENST00000427566 CCDC93Q567U6 631 aa19.99■□□□□ 0.79
CLK3P2-201ENST00000427566 OLFM4Q6UX06 510 aa19.99■□□□□ 0.79
CLK3P2-201ENST00000427566 GTF3C3Q9Y5Q9 886 aa19.99■□□□□ 0.79
CLK3P2-201ENST00000427566 CWF19L2Q2TBE0 894 aaKnown RBP19.99■□□□□ 0.79
CLK3P2-201ENST00000427566 TAOK3Q9H2K8 898 aa19.99■□□□□ 0.79
CLK3P2-201ENST00000427566 SMC4Q9NTJ3 1288 aa19.99■□□□□ 0.79
CLK3P2-201ENST00000427566 PRELPP51888 382 aa19.98■□□□□ 0.79
CLK3P2-201ENST00000427566 NEXNQ0ZGT2 675 aa19.98■□□□□ 0.79
CLK3P2-201ENST00000427566 TRIM28Q13263 835 aaKnown RBP19.98■□□□□ 0.79
CLK3P2-201ENST00000427566 DNAAF4Q8WXU2 420 aa19.98■□□□□ 0.79
CLK3P2-201ENST00000427566 HOXA10P31260 410 aaPredicted RBP19.97■□□□□ 0.79
CLK3P2-201ENST00000427566 JARID2Q92833 1246 aaPredicted RBP19.97■□□□□ 0.79
CLK3P2-201ENST00000427566 CWC25Q9NXE8 425 aaPredicted RBP19.97■□□□□ 0.79
CLK3P2-201ENST00000427566 BCAR3O75815 825 aa19.96■□□□□ 0.79
CLK3P2-201ENST00000427566 C7orf43Q8WVR3 580 aa19.96■□□□□ 0.79
CLK3P2-201ENST00000427566 CRAMP1Q96RY5 1269 aa19.96■□□□□ 0.79
CLK3P2-201ENST00000427566 MYH3P11055 1940 aa19.96■□□□□ 0.79
CLK3P2-201ENST00000427566 IRS4O14654 1257 aaPredicted RBP19.95■□□□□ 0.78
CLK3P2-201ENST00000427566 PPEF1O14829 653 aaPredicted RBP19.95■□□□□ 0.78
CLK3P2-201ENST00000427566 DDX46Q7L014 1031 aaKnown RBP19.95■□□□□ 0.78
CLK3P2-201ENST00000427566 CCDC191Q8NCU4 936 aa19.95■□□□□ 0.78
CLK3P2-201ENST00000427566 ABCC4O15439 1325 aa19.95■□□□□ 0.78
CLK3P2-201ENST00000427566 NEURL1BA8MQ27 555 aa19.94■□□□□ 0.78
CLK3P2-201ENST00000427566 ZBTB38Q8NAP3 1195 aaPredicted RBP19.94■□□□□ 0.78
CLK3P2-201ENST00000427566 TMX4Q9H1E5 349 aaPredicted RBP19.94■□□□□ 0.78
CLK3P2-201ENST00000427566 NOB1Q9ULX3 412 aaKnown RBP19.94■□□□□ 0.78
CLK3P2-201ENST00000427566 BEND3Q5T5X7 828 aa19.93■□□□□ 0.78
CLK3P2-201ENST00000427566 RTKN2Q8IZC4 609 aa19.93■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms