RNA–Protein interactions for RNA: ENST00000427494.6

APOBEC3D-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 3D, humanhuman

TSL 1 (best) BASIC

Gene APOBEC3D, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC3D-202ENST00000427494 SSFA2P28290 1259 aa16.97■□□□□ 0.31
APOBEC3D-202ENST00000427494 PTPN12Q05209 780 aaKnown RBP16.97■□□□□ 0.31
APOBEC3D-202ENST00000427494 RUFY2Q8WXA3 655 aa16.97■□□□□ 0.31
APOBEC3D-202ENST00000427494 PIGBQ92521 554 aa16.97■□□□□ 0.31
APOBEC3D-202ENST00000427494 WNK3Q9BYP7 1800 aa16.97■□□□□ 0.31
APOBEC3D-202ENST00000427494 MCM2P49736 904 aa16.97■□□□□ 0.31
APOBEC3D-202ENST00000427494 ASAP1Q9ULH1 1129 aa16.97■□□□□ 0.31
APOBEC3D-202ENST00000427494 LMBR1LQ6UX01 489 aa16.96■□□□□ 0.31
APOBEC3D-202ENST00000427494 CWC22Q9HCG8 908 aaKnown RBP16.96■□□□□ 0.31
APOBEC3D-202ENST00000427494 CHMP3Q9Y3E7 222 aa16.96■□□□□ 0.31
APOBEC3D-202ENST00000427494 FOXO4P98177 505 aa16.95■□□□□ 0.3
APOBEC3D-202ENST00000427494 TFCP2Q12800 502 aa16.95■□□□□ 0.3
APOBEC3D-202ENST00000427494 TRAK2O60296 914 aa16.95■□□□□ 0.3
APOBEC3D-202ENST00000427494 DNAJC10Q8IXB1 793 aa16.95■□□□□ 0.3
APOBEC3D-202ENST00000427494 ZGPATQ8N5A5 531 aaKnown RBP16.95■□□□□ 0.3
APOBEC3D-202ENST00000427494 CCDC191Q8NCU4 936 aa16.95■□□□□ 0.3
APOBEC3D-202ENST00000427494 TMX3Q96JJ7 454 aa16.95■□□□□ 0.3
APOBEC3D-202ENST00000427494 TEX13AQ9BXU3 409 aaPredicted RBP16.95■□□□□ 0.3
APOBEC3D-202ENST00000427494 BOLA2Q9H3K6 86 aa16.95■□□□□ 0.3
APOBEC3D-202ENST00000427494 ATG3Q9NT62 314 aa16.95■□□□□ 0.3
APOBEC3D-202ENST00000427494 ZNF330Q9Y3S2 320 aaPredicted RBP16.95■□□□□ 0.3
APOBEC3D-202ENST00000427494 NUCB2P80303 420 aa16.94■□□□□ 0.3
APOBEC3D-202ENST00000427494 VSIG10Q8N0Z9 540 aa16.94■□□□□ 0.3
APOBEC3D-202ENST00000427494 UPF3BQ9BZI7 483 aaKnown RBP16.94■□□□□ 0.3
APOBEC3D-202ENST00000427494 LRP6O75581 1613 aa16.94■□□□□ 0.3
APOBEC3D-202ENST00000427494 HIP1O00291 1037 aa16.93■□□□□ 0.3
APOBEC3D-202ENST00000427494 TNNI3KQ59H18 835 aa16.93■□□□□ 0.3
APOBEC3D-202ENST00000427494 FPGT-TNNI3KV9GXZ4 949 aa16.93■□□□□ 0.3
APOBEC3D-202ENST00000427494 NOL8Q76FK4 1167 aaKnown RBP16.93■□□□□ 0.3
APOBEC3D-202ENST00000427494 SNX14Q9Y5W7 946 aa16.93■□□□□ 0.3
APOBEC3D-202ENST00000427494 TNKS1BP1Q9C0C2 1729 aaKnown RBP16.92■□□□□ 0.3
APOBEC3D-202ENST00000427494 FSD1Q9BTV5 496 aa16.92■□□□□ 0.3
APOBEC3D-202ENST00000427494 PHLPP1O60346 1717 aa16.92■□□□□ 0.3
APOBEC3D-202ENST00000427494 EXOC5O00471 708 aa16.91■□□□□ 0.3
APOBEC3D-202ENST00000427494 STARD3NLO95772 234 aa16.91■□□□□ 0.3
APOBEC3D-202ENST00000427494 NMIQ13287 307 aaPredicted RBP16.91■□□□□ 0.3
APOBEC3D-202ENST00000427494 KIF6Q6ZMV9 814 aa16.91■□□□□ 0.3
APOBEC3D-202ENST00000427494 DBNLQ9UJU6 430 aaKnown RBP16.91■□□□□ 0.3
APOBEC3D-202ENST00000427494 LTBP4Q8N2S1 1624 aa16.91■□□□□ 0.3
APOBEC3D-202ENST00000427494 BCL9O00512 1426 aa16.91■□□□□ 0.3
APOBEC3D-202ENST00000427494 PTMSP20962 102 aa16.91■□□□□ 0.3
APOBEC3D-202ENST00000427494 PTH1RQ03431 593 aa16.91■□□□□ 0.3
APOBEC3D-202ENST00000427494 ISCA1Q9BUE6 129 aa16.91■□□□□ 0.3
APOBEC3D-202ENST00000427494 CYP2E1P05181 493 aaPredicted RBP16.9■□□□□ 0.3
APOBEC3D-202ENST00000427494 TCIRG1Q13488 830 aa16.9■□□□□ 0.3
APOBEC3D-202ENST00000427494 CLEC17AQ6ZS10 378 aa16.9■□□□□ 0.3
APOBEC3D-202ENST00000427494 RASEFQ8IZ41 740 aa16.9■□□□□ 0.3
APOBEC3D-202ENST00000427494 IL27Q8NEV9 243 aa16.9■□□□□ 0.3
APOBEC3D-202ENST00000427494 FAM227BQ96M60 508 aa16.9■□□□□ 0.3
APOBEC3D-202ENST00000427494 GZF1Q9H116 711 aaPredicted RBP16.9■□□□□ 0.3
APOBEC3D-202ENST00000427494 KAT6BQ8WYB5 2073 aa16.9■□□□□ 0.3
APOBEC3D-202ENST00000427494 DOT1LQ8TEK3 1739 aa16.9■□□□□ 0.3
APOBEC3D-202ENST00000427494 ATP5JP18859 108 aa16.89■□□□□ 0.3
APOBEC3D-202ENST00000427494 CUL4AQ13619 759 aa16.89■□□□□ 0.3
APOBEC3D-202ENST00000427494 PKP1Q13835 747 aa16.89■□□□□ 0.3
APOBEC3D-202ENST00000427494 NRAPQ86VF7 1730 aa16.89■□□□□ 0.29
APOBEC3D-202ENST00000427494 CCDC171Q6TFL3 1326 aa16.89■□□□□ 0.29
APOBEC3D-202ENST00000427494 GOLGA6L22H0YM25 854 aa16.89■□□□□ 0.29
APOBEC3D-202ENST00000427494 BAG4O95429 457 aaKnown RBP16.89■□□□□ 0.29
APOBEC3D-202ENST00000427494 SYTL4Q96C24 671 aaPredicted RBP16.89■□□□□ 0.29
APOBEC3D-202ENST00000427494 DBNDD2Q9BQY9 259 aa16.89■□□□□ 0.29
APOBEC3D-202ENST00000427494 ADAMTS2O95450 1211 aa16.88■□□□□ 0.29
APOBEC3D-202ENST00000427494 ARXQ96QS3 562 aa16.88■□□□□ 0.29
APOBEC3D-202ENST00000427494 A0A0D9SFI3 127 aa16.88■□□□□ 0.29
APOBEC3D-202ENST00000427494 PRPF40BQ6NWY9 871 aaKnown RBP16.88■□□□□ 0.29
APOBEC3D-202ENST00000427494 ATG9AQ7Z3C6 839 aa16.88■□□□□ 0.29
APOBEC3D-202ENST00000427494 EDC3Q96F86 508 aaKnown RBP16.87■□□□□ 0.29
APOBEC3D-202ENST00000427494 INTS4Q96HW7 963 aaKnown RBP16.87■□□□□ 0.29
APOBEC3D-202ENST00000427494 MAP3K15Q6ZN16 1313 aa16.87■□□□□ 0.29
APOBEC3D-202ENST00000427494 IL15P40933 162 aaPredicted RBP16.86■□□□□ 0.29
APOBEC3D-202ENST00000427494 SKOR2Q2VWA4 1001 aaPredicted RBP16.86■□□□□ 0.29
APOBEC3D-202ENST00000427494 ZNF594Q96JF6 807 aaPredicted RBP16.86■□□□□ 0.29
APOBEC3D-202ENST00000427494 TTC14Q96N46 770 aa16.86■□□□□ 0.29
APOBEC3D-202ENST00000427494 SLC4A9Q96Q91 983 aa16.86■□□□□ 0.29
APOBEC3D-202ENST00000427494 CYP19A1P11511 503 aaPredicted RBP16.86■□□□□ 0.29
APOBEC3D-202ENST00000427494 CASTP20810 708 aaKnown RBP16.86■□□□□ 0.29
APOBEC3D-202ENST00000427494 KCNJ4P48050 445 aa16.86■□□□□ 0.29
APOBEC3D-202ENST00000427494 TRIM28Q13263 835 aaKnown RBP16.86■□□□□ 0.29
APOBEC3D-202ENST00000427494 DNAJC2Q99543 621 aaKnown RBP16.86■□□□□ 0.29
APOBEC3D-202ENST00000427494 SNRKQ9NRH2 765 aa16.86■□□□□ 0.29
APOBEC3D-202ENST00000427494 RBM8AQ9Y5S9 174 aaKnown RBP16.86■□□□□ 0.29
APOBEC3D-202ENST00000427494 ANKRD36CQ5JPF3 1778 aa16.85■□□□□ 0.29
APOBEC3D-202ENST00000427494 MED23Q9ULK4 1368 aa16.85■□□□□ 0.29
APOBEC3D-202ENST00000427494 EYA2O00167 538 aa16.85■□□□□ 0.29
APOBEC3D-202ENST00000427494 KCNB2Q92953 911 aa16.85■□□□□ 0.29
APOBEC3D-202ENST00000427494 NEUROD6Q96NK8 337 aa16.85■□□□□ 0.29
APOBEC3D-202ENST00000427494 ZDHHC9Q9Y397 364 aa16.85■□□□□ 0.29
APOBEC3D-202ENST00000427494 CCDC9Q9Y3X0 531 aaKnown RBP16.85■□□□□ 0.29
APOBEC3D-202ENST00000427494 ZNF609O15014 1411 aa16.84■□□□□ 0.29
APOBEC3D-202ENST00000427494 PCCAP05165 728 aaPredicted RBP16.84■□□□□ 0.29
APOBEC3D-202ENST00000427494 PRIM1P49642 420 aaKnown RBP16.84■□□□□ 0.29
APOBEC3D-202ENST00000427494 NECTIN1Q15223 517 aa16.84■□□□□ 0.29
APOBEC3D-202ENST00000427494 LRRC24Q50LG9 513 aa16.84■□□□□ 0.29
APOBEC3D-202ENST00000427494 MCTP1Q6DN14 999 aa16.84■□□□□ 0.29
APOBEC3D-202ENST00000427494 GIGYF2Q6Y7W6 1299 aaKnown RBP16.84■□□□□ 0.29
APOBEC3D-202ENST00000427494 MAP4K1Q92918 833 aa16.84■□□□□ 0.29
APOBEC3D-202ENST00000427494 JAKMIP1Q96N16 626 aaKnown RBP16.84■□□□□ 0.29
APOBEC3D-202ENST00000427494 HAUS7Q99871 368 aa16.84■□□□□ 0.29
APOBEC3D-202ENST00000427494 CDCA7Q9BWT1 371 aaPredicted RBP16.84■□□□□ 0.29
APOBEC3D-202ENST00000427494 GPR108Q9NPR9 543 aa16.84■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms