RNA–Protein interactions for RNA: ENST00000427417.1

COMMD1-202, Transcript of copper metabolism domain containing 1, humanhuman

TSL 5

Gene COMMD1, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-202ENST00000427417 DBF4Q9UBU7 674 aaPredicted RBP13.22□□□□□ -0.29
COMMD1-202ENST00000427417 RNF123Q5XPI4 1314 aa13.21□□□□□ -0.29
COMMD1-202ENST00000427417 AIMP1Q12904 312 aaKnown RBP13.21□□□□□ -0.29
COMMD1-202ENST00000427417 CRY2Q49AN0 593 aa13.21□□□□□ -0.29
COMMD1-202ENST00000427417 RTKN2Q8IZC4 609 aa13.21□□□□□ -0.29
COMMD1-202ENST00000427417 RBM46Q8TBY0 533 aaKnown RBP13.21□□□□□ -0.29
COMMD1-202ENST00000427417 XAGE3Q8WTP9 111 aa13.21□□□□□ -0.29
COMMD1-202ENST00000427417 C7orf43Q8WVR3 580 aa13.21□□□□□ -0.29
COMMD1-202ENST00000427417 UTP14AQ9BVJ6 771 aaKnown RBP13.21□□□□□ -0.29
COMMD1-202ENST00000427417 CHMP4AQ9BY43 222 aa13.21□□□□□ -0.29
COMMD1-202ENST00000427417 MBIPQ9NS73 344 aa13.21□□□□□ -0.29
COMMD1-202ENST00000427417 CHPF2Q9P2E5 772 aa13.21□□□□□ -0.29
COMMD1-202ENST00000427417 NTSR2O95665 410 aa13.2□□□□□ -0.3
COMMD1-202ENST00000427417 ZNF853P0CG23 659 aa13.2□□□□□ -0.3
COMMD1-202ENST00000427417 DUSP27Q5VZP5 1158 aa13.2□□□□□ -0.3
COMMD1-202ENST00000427417 NLRP3Q96P20 1036 aa13.2□□□□□ -0.3
COMMD1-202ENST00000427417 VEGFAP15692 232 aaPredicted RBP13.19□□□□□ -0.3
COMMD1-202ENST00000427417 HOXA10P31260 410 aaPredicted RBP13.19□□□□□ -0.3
COMMD1-202ENST00000427417 FKBP4Q02790 459 aaKnown RBP eCLIP13.19□□□□□ -0.3
COMMD1-202ENST00000427417 TCIRG1Q13488 830 aa13.19□□□□□ -0.3
COMMD1-202ENST00000427417 GRIPAP1Q4V328 841 aa13.19□□□□□ -0.3
COMMD1-202ENST00000427417 CC2D2BQ6DHV5 1058 aa13.19□□□□□ -0.3
COMMD1-202ENST00000427417 C3orf67Q6ZVT6 689 aa13.19□□□□□ -0.3
COMMD1-202ENST00000427417 ZNF428Q96B54 188 aa13.19□□□□□ -0.3
COMMD1-202ENST00000427417 RBM17Q96I25 401 aaKnown RBP13.19□□□□□ -0.3
COMMD1-202ENST00000427417 HYPKQ9NX55 129 aa13.19□□□□□ -0.3
COMMD1-202ENST00000427417 WDR90Q96KV7 1748 aa13.19□□□□□ -0.3
COMMD1-202ENST00000427417 POTECB2RU33 542 aa13.18□□□□□ -0.3
COMMD1-202ENST00000427417 APLP1P51693 650 aa13.18□□□□□ -0.3
COMMD1-202ENST00000427417 FSTL1Q12841 308 aa13.18□□□□□ -0.3
COMMD1-202ENST00000427417 SLC10A5Q5PT55 438 aa13.18□□□□□ -0.3
COMMD1-202ENST00000427417 ANKRD13DQ6ZTN6 518 aa13.18□□□□□ -0.3
COMMD1-202ENST00000427417 PLBD2Q8NHP8 589 aa13.18□□□□□ -0.3
COMMD1-202ENST00000427417 TMX4Q9H1E5 349 aaPredicted RBP13.18□□□□□ -0.3
COMMD1-202ENST00000427417 MRS2Q9HD23 443 aa13.18□□□□□ -0.3
COMMD1-202ENST00000427417 ZNF277Q9NRM2 450 aaPredicted RBP13.18□□□□□ -0.3
COMMD1-202ENST00000427417 DDNO94850 711 aaPredicted RBP13.17□□□□□ -0.3
COMMD1-202ENST00000427417 CCDC27Q2M243 656 aa13.17□□□□□ -0.3
COMMD1-202ENST00000427417 CCDC184Q52MB2 194 aa13.17□□□□□ -0.3
COMMD1-202ENST00000427417 NLRP10Q86W26 655 aa13.17□□□□□ -0.3
COMMD1-202ENST00000427417 CRAMP1Q96RY5 1269 aa13.17□□□□□ -0.3
COMMD1-202ENST00000427417 SH3TC1Q8TE82 1336 aa13.16□□□□□ -0.3
COMMD1-202ENST00000427417 TCERG1O14776 1098 aaKnown RBP13.16□□□□□ -0.3
COMMD1-202ENST00000427417 NCBP3Q53F19 620 aaKnown RBP13.16□□□□□ -0.3
COMMD1-202ENST00000427417 SMC1BQ8NDV3 1235 aa13.16□□□□□ -0.3
COMMD1-202ENST00000427417 TRMT112Q9UI30 125 aaKnown RBP13.16□□□□□ -0.3
COMMD1-202ENST00000427417 ANKRD36CQ5JPF3 1778 aa13.16□□□□□ -0.3
COMMD1-202ENST00000427417 PPEF1O14829 653 aaPredicted RBP13.15□□□□□ -0.3
COMMD1-202ENST00000427417 POTEIP0CG38 1075 aa13.15□□□□□ -0.3
COMMD1-202ENST00000427417 POTEJP0CG39 1038 aa13.15□□□□□ -0.3
COMMD1-202ENST00000427417 GOLGA2Q08379 1002 aa13.15□□□□□ -0.3
COMMD1-202ENST00000427417 SYNE4Q8N205 404 aa13.15□□□□□ -0.3
COMMD1-202ENST00000427417 PSMD1Q99460 953 aa13.15□□□□□ -0.3
COMMD1-202ENST00000427417 ZNF541Q9H0D2 1346 aa13.14□□□□□ -0.31
COMMD1-202ENST00000427417 SNED1Q8TER0 1413 aa13.14□□□□□ -0.31
COMMD1-202ENST00000427417 ELL2O00472 640 aaPredicted RBP13.14□□□□□ -0.31
COMMD1-202ENST00000427417 IARSP41252 1262 aaKnown RBP13.14□□□□□ -0.31
COMMD1-202ENST00000427417 CCDC30Q5VVM6 783 aa13.14□□□□□ -0.31
COMMD1-202ENST00000427417 RIC3Q7Z5B4 369 aa13.14□□□□□ -0.31
COMMD1-202ENST00000427417 DNAJC5GQ8N7S2 189 aa13.14□□□□□ -0.31
COMMD1-202ENST00000427417 LAMB2P55268 1798 aa13.14□□□□□ -0.31
COMMD1-202ENST00000427417 COL4A5P29400 1685 aa13.13□□□□□ -0.31
COMMD1-202ENST00000427417 IQCA1LA6NCM1 817 aa13.13□□□□□ -0.31
COMMD1-202ENST00000427417 WWC1Q8IX03 1113 aa13.13□□□□□ -0.31
COMMD1-202ENST00000427417 JDP2Q8WYK2 163 aa13.13□□□□□ -0.31
COMMD1-202ENST00000427417 ISCA1Q9BUE6 129 aa13.13□□□□□ -0.31
COMMD1-202ENST00000427417 IL16Q14005 1332 aa13.13□□□□□ -0.31
COMMD1-202ENST00000427417 BBOX1O75936 387 aa13.12□□□□□ -0.31
COMMD1-202ENST00000427417 DDX58O95786 925 aaKnown RBP13.12□□□□□ -0.31
COMMD1-202ENST00000427417 HCLS1P14317 486 aaPredicted RBP13.12□□□□□ -0.31
COMMD1-202ENST00000427417 HSP90B1P14625 803 aaKnown RBP13.12□□□□□ -0.31
COMMD1-202ENST00000427417 TRIM28Q13263 835 aaKnown RBP13.12□□□□□ -0.31
COMMD1-202ENST00000427417 DDX46Q7L014 1031 aaKnown RBP13.12□□□□□ -0.31
COMMD1-202ENST00000427417 C8orf58Q8NAV2 365 aa13.12□□□□□ -0.31
COMMD1-202ENST00000427417 ABCC4O15439 1325 aa13.12□□□□□ -0.31
COMMD1-202ENST00000427417 TAF1P21675 1872 aa13.11□□□□□ -0.31
COMMD1-202ENST00000427417 ATP5J2-PTCD1G3V325 749 aa13.11□□□□□ -0.31
COMMD1-202ENST00000427417 L3MBTL3Q96JM7 780 aaPredicted RBP13.11□□□□□ -0.31
COMMD1-202ENST00000427417 STK31Q9BXU1 1019 aa13.11□□□□□ -0.31
COMMD1-202ENST00000427417 VPS33BQ9H267 617 aa13.11□□□□□ -0.31
COMMD1-202ENST00000427417 ATP6V0A2Q9Y487 856 aa13.11□□□□□ -0.31
COMMD1-202ENST00000427417 FZD9O00144 591 aa13.1□□□□□ -0.31
COMMD1-202ENST00000427417 GRAPQ13588 217 aa13.1□□□□□ -0.31
COMMD1-202ENST00000427417 TMC4Q7Z404 712 aa13.1□□□□□ -0.31
COMMD1-202ENST00000427417 SUPT20HQ8NEM7 779 aa13.1□□□□□ -0.31
COMMD1-202ENST00000427417 GRAPLQ8TC17 118 aaPredicted RBP13.1□□□□□ -0.31
COMMD1-202ENST00000427417 TSR2Q969E8 191 aaKnown RBP13.1□□□□□ -0.31
COMMD1-202ENST00000427417 PHAXQ9H814 394 aaKnown RBP13.1□□□□□ -0.31
COMMD1-202ENST00000427417 EIF6P56537 245 aaKnown RBP13.09□□□□□ -0.31
COMMD1-202ENST00000427417 TWISTNBQ3B726 338 aaPredicted RBP13.09□□□□□ -0.31
COMMD1-202ENST00000427417 WDR63Q8IWG1 891 aa13.09□□□□□ -0.31
COMMD1-202ENST00000427417 SP8Q8IXZ3 490 aa13.09□□□□□ -0.31
COMMD1-202ENST00000427417 GPC2Q8N158 579 aa13.09□□□□□ -0.31
COMMD1-202ENST00000427417 LARGE2Q8N3Y3 721 aa13.09□□□□□ -0.31
COMMD1-202ENST00000427417 TSPYL6Q8N831 410 aa13.09□□□□□ -0.31
COMMD1-202ENST00000427417 KLRG1Q96E93 195 aa13.09□□□□□ -0.31
COMMD1-202ENST00000427417 FAM89AQ96GI7 184 aa13.09□□□□□ -0.31
COMMD1-202ENST00000427417 DDX60Q8IY21 1712 aaKnown RBP13.08□□□□□ -0.32
COMMD1-202ENST00000427417 SF3B3Q15393 1217 aaKnown RBP13.08□□□□□ -0.32
COMMD1-202ENST00000427417 RTL5Q5HYW3 569 aaPredicted RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms