RNA–Protein interactions for RNA: ENST00000427415.1

SDHAP1-204, Transcript of succinate dehydrogenase complex flavoprotein subunit A pseudogene 1, humanhuman

TSL 4 BASIC

Gene SDHAP1, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHAP1-204ENST00000427415 MAP3K2Q9Y2U5 619 aa28.9■■■□□ 2.22
SDHAP1-204ENST00000427415 ABCC12Q96J65 1359 aa28.89■■■□□ 2.22
SDHAP1-204ENST00000427415 NUTM1Q86Y26 1132 aa28.89■■■□□ 2.22
SDHAP1-204ENST00000427415 MYD88Q99836 296 aa28.89■■■□□ 2.22
SDHAP1-204ENST00000427415 METTL22Q9BUU2 404 aaPredicted RBP28.89■■■□□ 2.22
SDHAP1-204ENST00000427415 PIM2Q9P1W9 311 aa28.89■■■□□ 2.22
SDHAP1-204ENST00000427415 TNRC6CQ9HCJ0 1690 aaKnown RBP28.89■■■□□ 2.21
SDHAP1-204ENST00000427415 ATP5J2-PTCD1G3V325 749 aa28.88■■■□□ 2.21
SDHAP1-204ENST00000427415 NEXNQ0ZGT2 675 aa28.88■■■□□ 2.21
SDHAP1-204ENST00000427415 TRIM28Q13263 835 aaKnown RBP28.88■■■□□ 2.21
SDHAP1-204ENST00000427415 ERFEQ4G0M1 354 aa28.88■■■□□ 2.21
SDHAP1-204ENST00000427415 WWC3Q9ULE0 1092 aa28.88■■■□□ 2.21
SDHAP1-204ENST00000427415 KCNA3P22001 575 aa28.87■■■□□ 2.21
SDHAP1-204ENST00000427415 ALDH1L2Q3SY69 923 aa28.87■■■□□ 2.21
SDHAP1-204ENST00000427415 TRMT112Q9UI30 125 aaKnown RBP28.87■■■□□ 2.21
SDHAP1-204ENST00000427415 CACNA1SQ13698 1873 aa28.87■■■□□ 2.21
SDHAP1-204ENST00000427415 SH3TC1Q8TE82 1336 aa28.86■■■□□ 2.21
SDHAP1-204ENST00000427415 CHD4Q14839 1912 aa28.85■■■□□ 2.21
SDHAP1-204ENST00000427415 GRIN3BO60391 1043 aa28.85■■■□□ 2.21
SDHAP1-204ENST00000427415 YBX3P16989 372 aaKnown RBP eCLIP28.85■■■□□ 2.21
SDHAP1-204ENST00000427415 LAMB2P55268 1798 aa28.85■■■□□ 2.21
SDHAP1-204ENST00000427415 DALRD3Q5D0E6 543 aaKnown RBP28.84■■■□□ 2.21
SDHAP1-204ENST00000427415 CCDC191Q8NCU4 936 aa28.84■■■□□ 2.21
SDHAP1-204ENST00000427415 DNAAF4Q8WXU2 420 aa28.84■■■□□ 2.21
SDHAP1-204ENST00000427415 SSH1Q8WYL5 1049 aa28.84■■■□□ 2.21
SDHAP1-204ENST00000427415 BCS1LQ9Y276 419 aa28.84■■■□□ 2.21
SDHAP1-204ENST00000427415 GOLGB1Q14789 3259 aaKnown RBP28.83■■■□□ 2.21
SDHAP1-204ENST00000427415 MRPL50Q8N5N7 158 aaKnown RBP28.83■■■□□ 2.21
SDHAP1-204ENST00000427415 KLRG2A4D1S0 409 aaPredicted RBP28.82■■■□□ 2.2
SDHAP1-204ENST00000427415 SRGNP10124 158 aa28.82■■■□□ 2.2
SDHAP1-204ENST00000427415 STYK1Q6J9G0 422 aa28.82■■■□□ 2.2
SDHAP1-204ENST00000427415 ZNF622Q969S3 477 aaKnown RBP eCLIP28.82■■■□□ 2.2
SDHAP1-204ENST00000427415 MASTLQ96GX5 879 aa28.82■■■□□ 2.2
SDHAP1-204ENST00000427415 SMC4Q9NTJ3 1288 aa28.82■■■□□ 2.2
SDHAP1-204ENST00000427415 CWC25Q9NXE8 425 aaPredicted RBP28.82■■■□□ 2.2
SDHAP1-204ENST00000427415 DDX60Q8IY21 1712 aaKnown RBP28.82■■■□□ 2.2
SDHAP1-204ENST00000427415 BCL2L13Q9BXK5 485 aa28.81■■■□□ 2.2
SDHAP1-204ENST00000427415 NPR1P16066 1061 aa28.8■■■□□ 2.2
SDHAP1-204ENST00000427415 SLC10A5Q5PT55 438 aa28.8■■■□□ 2.2
SDHAP1-204ENST00000427415 TTLL6Q8N841 843 aa28.8■■■□□ 2.2
SDHAP1-204ENST00000427415 PTPRCP08575 1304 aa28.79■■■□□ 2.2
SDHAP1-204ENST00000427415 CNKSR1Q969H4 720 aa28.79■■■□□ 2.2
SDHAP1-204ENST00000427415 NLRP3Q96P20 1036 aa28.79■■■□□ 2.2
SDHAP1-204ENST00000427415 IGKV5-2P06315 115 aa28.78■■■□□ 2.2
SDHAP1-204ENST00000427415 CRY2Q49AN0 593 aa28.78■■■□□ 2.2
SDHAP1-204ENST00000427415 ZBTB38Q8NAP3 1195 aaPredicted RBP28.78■■■□□ 2.2
SDHAP1-204ENST00000427415 FAM89AQ96GI7 184 aa28.78■■■□□ 2.2
SDHAP1-204ENST00000427415 HSP90B1P14625 803 aaKnown RBP28.77■■■□□ 2.2
SDHAP1-204ENST00000427415 LINS1Q8NG48 757 aa28.77■■■□□ 2.2
SDHAP1-204ENST00000427415 RPGRQ92834 1020 aaKnown RBP28.77■■■□□ 2.2
SDHAP1-204ENST00000427415 SLX4Q8IY92 1834 aa28.77■■■□□ 2.2
SDHAP1-204ENST00000427415 NEURL1BA8MQ27 555 aa28.76■■■□□ 2.19
SDHAP1-204ENST00000427415 F6X3S4 739 aa28.76■■■□□ 2.19
SDHAP1-204ENST00000427415 PCCAP05165 728 aaPredicted RBP28.76■■■□□ 2.19
SDHAP1-204ENST00000427415 MYH3P11055 1940 aa28.75■■■□□ 2.19
SDHAP1-204ENST00000427415 HCLS1P14317 486 aaPredicted RBP28.75■■■□□ 2.19
SDHAP1-204ENST00000427415 RARSP54136 660 aaKnown RBP28.75■■■□□ 2.19
SDHAP1-204ENST00000427415 CWF19L2Q2TBE0 894 aaKnown RBP28.75■■■□□ 2.19
SDHAP1-204ENST00000427415 SYNE4Q8N205 404 aa28.75■■■□□ 2.19
SDHAP1-204ENST00000427415 RTL5Q5HYW3 569 aaPredicted RBP28.74■■■□□ 2.19
SDHAP1-204ENST00000427415 UTRNP46939 3433 aa28.73■■■□□ 2.19
SDHAP1-204ENST00000427415 IRS4O14654 1257 aaPredicted RBP28.73■■■□□ 2.19
SDHAP1-204ENST00000427415 BRPF1P55201 1214 aaPredicted RBP28.73■■■□□ 2.19
SDHAP1-204ENST00000427415 KIF16BQ96L93 1317 aa28.72■■■□□ 2.19
SDHAP1-204ENST00000427415 ALDH1B1P30837 517 aa28.72■■■□□ 2.19
SDHAP1-204ENST00000427415 PRPF40BQ6NWY9 871 aaKnown RBP28.72■■■□□ 2.19
SDHAP1-204ENST00000427415 C3orf67Q6ZVT6 689 aa28.72■■■□□ 2.19
SDHAP1-204ENST00000427415 RBM17Q96I25 401 aaKnown RBP28.72■■■□□ 2.19
SDHAP1-204ENST00000427415 BEND3Q5T5X7 828 aa28.71■■■□□ 2.19
SDHAP1-204ENST00000427415 SLC4A10Q6U841 1118 aa28.71■■■□□ 2.19
SDHAP1-204ENST00000427415 CDHR2Q9BYE9 1310 aa28.7■■■□□ 2.19
SDHAP1-204ENST00000427415 HOXA10P31260 410 aaPredicted RBP28.7■■■□□ 2.18
SDHAP1-204ENST00000427415 GCKRQ14397 625 aa28.7■■■□□ 2.18
SDHAP1-204ENST00000427415 ARHGAP27Q6ZUM4 889 aa28.68■■■□□ 2.18
SDHAP1-204ENST00000427415 CRAMP1Q96RY5 1269 aa28.68■■■□□ 2.18
SDHAP1-204ENST00000427415 SRCIN1Q9C0H9 1055 aa28.68■■■□□ 2.18
SDHAP1-204ENST00000427415 ALDH1L1O75891 902 aa28.67■■■□□ 2.18
SDHAP1-204ENST00000427415 SOGA3Q5TF21 947 aa28.67■■■□□ 2.18
SDHAP1-204ENST00000427415 NOB1Q9ULX3 412 aaKnown RBP28.67■■■□□ 2.18
SDHAP1-204ENST00000427415 FER1L6Q2WGJ9 1857 aa28.67■■■□□ 2.18
SDHAP1-204ENST00000427415 H7C1W4 665 aa28.66■■■□□ 2.18
SDHAP1-204ENST00000427415 PDE8AO60658 829 aa28.66■■■□□ 2.18
SDHAP1-204ENST00000427415 UBE3BQ7Z3V4 1068 aa28.66■■■□□ 2.18
SDHAP1-204ENST00000427415 API5Q9BZZ5 524 aaKnown RBP28.66■■■□□ 2.18
SDHAP1-204ENST00000427415 C21orf2O43822 256 aa28.65■■■□□ 2.18
SDHAP1-204ENST00000427415 SF3B3Q15393 1217 aaKnown RBP28.65■■■□□ 2.18
SDHAP1-204ENST00000427415 DDX46Q7L014 1031 aaKnown RBP28.65■■■□□ 2.18
SDHAP1-204ENST00000427415 JARID2Q92833 1246 aaPredicted RBP28.65■■■□□ 2.18
SDHAP1-204ENST00000427415 ZNF219Q9P2Y4 722 aaPredicted RBP28.65■■■□□ 2.18
SDHAP1-204ENST00000427415 TAF1P21675 1872 aa28.65■■■□□ 2.18
SDHAP1-204ENST00000427415 ABCC4O15439 1325 aa28.64■■■□□ 2.17
SDHAP1-204ENST00000427415 SBF1O95248 1867 aa28.63■■■□□ 2.17
SDHAP1-204ENST00000427415 IPO8O15397 1037 aaKnown RBP28.63■■■□□ 2.17
SDHAP1-204ENST00000427415 ARHGAP45Q92619 1136 aa28.62■■■□□ 2.17
SDHAP1-204ENST00000427415 CCDC88AQ3V6T2 1871 aa28.61■■■□□ 2.17
SDHAP1-204ENST00000427415 BCAR3O75815 825 aa28.61■■■□□ 2.17
SDHAP1-204ENST00000427415 CCDC152Q4G0S7 254 aa28.61■■■□□ 2.17
SDHAP1-204ENST00000427415 CCDC93Q567U6 631 aa28.61■■■□□ 2.17
SDHAP1-204ENST00000427415 C7orf43Q8WVR3 580 aa28.61■■■□□ 2.17
SDHAP1-204ENST00000427415 C9orf78Q9NZ63 289 aaPredicted RBP28.61■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 67.1 ms