RNA–Protein interactions for RNA: ENST00000427187.6

VNN3-208, Transcript of vanin 3, humanhuman

TSL 1 (best) BASIC

Gene VNN3, Length 1,214 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VNN3-208ENST00000427187 JDP2Q8WYK2 163 aa11.6□□□□□ -0.55
VNN3-208ENST00000427187 RTF1Q92541 710 aaKnown RBP11.6□□□□□ -0.55
VNN3-208ENST00000427187 LAMB4A4D0S4 1761 aa11.59□□□□□ -0.55
VNN3-208ENST00000427187 NUP98P52948 1817 aa11.59□□□□□ -0.55
VNN3-208ENST00000427187 U2AF1L5P0DN76 240 aaPredicted RBP11.59□□□□□ -0.55
VNN3-208ENST00000427187 GPTP24298 496 aa11.59□□□□□ -0.55
VNN3-208ENST00000427187 LMOD1P29536 600 aaPredicted RBP11.59□□□□□ -0.55
VNN3-208ENST00000427187 SCNN1DP51172 638 aa11.59□□□□□ -0.55
VNN3-208ENST00000427187 EIF6P56537 245 aaKnown RBP11.59□□□□□ -0.55
VNN3-208ENST00000427187 U2AF1Q01081 240 aaKnown RBP eCLIP11.59□□□□□ -0.55
VNN3-208ENST00000427187 MAP2K1Q02750 393 aaPredicted RBP11.59□□□□□ -0.55
VNN3-208ENST00000427187 CAPNS2Q96L46 248 aa11.59□□□□□ -0.55
VNN3-208ENST00000427187 PSMD1Q99460 953 aa11.59□□□□□ -0.55
VNN3-208ENST00000427187 THSD7BQ9C0I4 1608 aa11.59□□□□□ -0.55
VNN3-208ENST00000427187 TRPM7Q96QT4 1865 aa11.58□□□□□ -0.56
VNN3-208ENST00000427187 CCDC85CA6NKD9 419 aa11.58□□□□□ -0.56
VNN3-208ENST00000427187 CRY2Q49AN0 593 aa11.58□□□□□ -0.56
VNN3-208ENST00000427187 LARGE2Q8N3Y3 721 aa11.58□□□□□ -0.56
VNN3-208ENST00000427187 NPC1L1Q9UHC9 1359 aa11.57□□□□□ -0.56
VNN3-208ENST00000427187 AOC2O75106 756 aa11.57□□□□□ -0.56
VNN3-208ENST00000427187 MYL6BP14649 208 aa11.57□□□□□ -0.56
VNN3-208ENST00000427187 CST9Q5W186 159 aa11.57□□□□□ -0.56
VNN3-208ENST00000427187 TTLL7Q6ZT98 887 aa11.57□□□□□ -0.56
VNN3-208ENST00000427187 C3orf67Q6ZVT6 689 aa11.57□□□□□ -0.56
VNN3-208ENST00000427187 RPGRQ92834 1020 aaKnown RBP11.57□□□□□ -0.56
VNN3-208ENST00000427187 CFAP53Q96M91 514 aa11.57□□□□□ -0.56
VNN3-208ENST00000427187 ZBTB3Q9H5J0 574 aa11.57□□□□□ -0.56
VNN3-208ENST00000427187 UBN2Q6ZU65 1347 aa11.57□□□□□ -0.56
VNN3-208ENST00000427187 PPEF1O14829 653 aaPredicted RBP11.56□□□□□ -0.56
VNN3-208ENST00000427187 SLC34A2O95436 690 aa11.56□□□□□ -0.56
VNN3-208ENST00000427187 AOC3Q16853 763 aa11.56□□□□□ -0.56
VNN3-208ENST00000427187 SUSD4Q5VX71 490 aa11.56□□□□□ -0.56
VNN3-208ENST00000427187 GPR101Q96P66 508 aaPredicted RBP11.56□□□□□ -0.56
VNN3-208ENST00000427187 RRP7AQ9Y3A4 280 aaKnown RBP11.56□□□□□ -0.56
VNN3-208ENST00000427187 DLG5Q8TDM6 1919 aa11.55□□□□□ -0.56
VNN3-208ENST00000427187 KDM3BQ7LBC6 1761 aa11.55□□□□□ -0.56
VNN3-208ENST00000427187 TAF7Q15545 349 aaPredicted RBP11.55□□□□□ -0.56
VNN3-208ENST00000427187 BEGAINQ9BUH8 593 aa11.55□□□□□ -0.56
VNN3-208ENST00000427187 NYXQ9GZU5 481 aa11.55□□□□□ -0.56
VNN3-208ENST00000427187 NUDCQ9Y266 331 aa11.55□□□□□ -0.56
VNN3-208ENST00000427187 MAP3K15Q6ZN16 1313 aa11.55□□□□□ -0.56
VNN3-208ENST00000427187 CASP8AP2Q9UKL3 1982 aa11.54□□□□□ -0.56
VNN3-208ENST00000427187 RGL2O15211 777 aa11.54□□□□□ -0.56
VNN3-208ENST00000427187 PPIP5K2O43314 1243 aa11.54□□□□□ -0.56
VNN3-208ENST00000427187 PPP2R1AP30153 589 aa11.54□□□□□ -0.56
VNN3-208ENST00000427187 ECE1P42892 770 aa11.54□□□□□ -0.56
VNN3-208ENST00000427187 KIF6Q6ZMV9 814 aa11.54□□□□□ -0.56
VNN3-208ENST00000427187 NIM1KQ8IY84 436 aa11.54□□□□□ -0.56
VNN3-208ENST00000427187 RBM17Q96I25 401 aaKnown RBP11.54□□□□□ -0.56
VNN3-208ENST00000427187 CFAP44Q96MT7 982 aa11.54□□□□□ -0.56
VNN3-208ENST00000427187 THUMPD2Q9BTF0 503 aaKnown RBP11.54□□□□□ -0.56
VNN3-208ENST00000427187 TLL2Q9Y6L7 1015 aa11.54□□□□□ -0.56
VNN3-208ENST00000427187 RIC1Q4ADV7 1423 aa11.53□□□□□ -0.56
VNN3-208ENST00000427187 CELF2O95319 508 aaKnown RBP11.53□□□□□ -0.56
VNN3-208ENST00000427187 NTSR2O95665 410 aa11.53□□□□□ -0.56
VNN3-208ENST00000427187 HOXA10P31260 410 aaPredicted RBP11.53□□□□□ -0.56
VNN3-208ENST00000427187 MLLT1Q03111 559 aaPredicted RBP11.53□□□□□ -0.56
VNN3-208ENST00000427187 CC2D2BQ6DHV5 1058 aa11.53□□□□□ -0.56
VNN3-208ENST00000427187 USP50Q70EL3 339 aaPredicted RBP11.53□□□□□ -0.56
VNN3-208ENST00000427187 GLIS2Q9BZE0 524 aaPredicted RBP11.53□□□□□ -0.56
VNN3-208ENST00000427187 ZNF408Q9H9D4 720 aa11.53□□□□□ -0.56
VNN3-208ENST00000427187 ERVV-1B6SEH8 477 aa11.52□□□□□ -0.57
VNN3-208ENST00000427187 CRAMP1Q96RY5 1269 aa11.52□□□□□ -0.57
VNN3-208ENST00000427187 ADARB2Q9NS39 739 aaKnown RBP11.52□□□□□ -0.57
VNN3-208ENST00000427187 GPRC5DQ9NZD1 345 aa11.52□□□□□ -0.57
VNN3-208ENST00000427187 SHTN1A0MZ66 631 aa11.51□□□□□ -0.57
VNN3-208ENST00000427187 HTATSF1O43719 755 aaKnown RBP11.51□□□□□ -0.57
VNN3-208ENST00000427187 GMPSP49915 693 aaPredicted RBP11.51□□□□□ -0.57
VNN3-208ENST00000427187 EIF4A1P60842 406 aaKnown RBP11.51□□□□□ -0.57
VNN3-208ENST00000427187 CXCL9Q07325 125 aa11.51□□□□□ -0.57
VNN3-208ENST00000427187 DLK2Q6UY11 383 aa11.51□□□□□ -0.57
VNN3-208ENST00000427187 SAPCD2Q86UD0 394 aa11.51□□□□□ -0.57
VNN3-208ENST00000427187 ZNF34Q8IZ26 560 aa11.51□□□□□ -0.57
VNN3-208ENST00000427187 ZNF428Q96B54 188 aa11.51□□□□□ -0.57
VNN3-208ENST00000427187 IBTKQ9P2D0 1353 aaPredicted RBP11.51□□□□□ -0.57
VNN3-208ENST00000427187 LAMB2P55268 1798 aa11.5□□□□□ -0.57
VNN3-208ENST00000427187 RAD17O75943 681 aa11.5□□□□□ -0.57
VNN3-208ENST00000427187 TRPM4Q8TD43 1214 aa11.5□□□□□ -0.57
VNN3-208ENST00000427187 ZIC5Q96T25 663 aa11.5□□□□□ -0.57
VNN3-208ENST00000427187 MCOLN1Q9GZU1 580 aa11.5□□□□□ -0.57
VNN3-208ENST00000427187 ABCC4O15439 1325 aa11.5□□□□□ -0.57
VNN3-208ENST00000427187 TAF1P21675 1872 aa11.5□□□□□ -0.57
VNN3-208ENST00000427187 ANXA1P04083 346 aa11.49□□□□□ -0.57
VNN3-208ENST00000427187 MAP2K2P36507 400 aa11.49□□□□□ -0.57
VNN3-208ENST00000427187 HIRAP54198 1017 aaPredicted RBP11.49□□□□□ -0.57
VNN3-208ENST00000427187 CIAPIN1Q6FI81 312 aa11.49□□□□□ -0.57
VNN3-208ENST00000427187 GIGYF2Q6Y7W6 1299 aaKnown RBP11.49□□□□□ -0.57
VNN3-208ENST00000427187 NLRP3Q96P20 1036 aa11.49□□□□□ -0.57
VNN3-208ENST00000427187 ZNRF3Q9ULT6 936 aa11.49□□□□□ -0.57
VNN3-208ENST00000427187 ATP6V0A2Q9Y487 856 aa11.49□□□□□ -0.57
VNN3-208ENST00000427187 RGS19P49795 217 aa11.48□□□□□ -0.57
VNN3-208ENST00000427187 DGKZQ13574 1117 aa11.48□□□□□ -0.57
VNN3-208ENST00000427187 PROSER3Q2NL68 480 aa11.48□□□□□ -0.57
VNN3-208ENST00000427187 GRIPAP1Q4V328 841 aa11.48□□□□□ -0.57
VNN3-208ENST00000427187 DPP8Q6V1X1 898 aaPredicted RBP11.48□□□□□ -0.57
VNN3-208ENST00000427187 PPP1R42Q7Z4L9 355 aa11.48□□□□□ -0.57
VNN3-208ENST00000427187 BCL2L13Q9BXK5 485 aa11.48□□□□□ -0.57
VNN3-208ENST00000427187 TMX4Q9H1E5 349 aaPredicted RBP11.48□□□□□ -0.57
VNN3-208ENST00000427187 HCLS1P14317 486 aaPredicted RBP11.47□□□□□ -0.57
VNN3-208ENST00000427187 EIF2S2P20042 333 aaKnown RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms