RNA–Protein interactions for RNA: ENST00000426878.2

LMCD1-204, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-204ENST00000426878 TRIM28Q13263 835 aaKnown RBP22.17■■□□□ 1.14
LMCD1-204ENST00000426878 SLC10A5Q5PT55 438 aa22.17■■□□□ 1.14
LMCD1-204ENST00000426878 MIER1Q8N108 512 aa22.17■■□□□ 1.14
LMCD1-204ENST00000426878 ISCA1Q9BUE6 129 aa22.17■■□□□ 1.14
LMCD1-204ENST00000426878 STK31Q9BXU1 1019 aa22.17■■□□□ 1.14
LMCD1-204ENST00000426878 ARFGEF2Q9Y6D5 1785 aa22.15■■□□□ 1.14
LMCD1-204ENST00000426878 RIC3Q7Z5B4 369 aa22.15■■□□□ 1.14
LMCD1-204ENST00000426878 ZNF784Q8NCA9 323 aaPredicted RBP22.15■■□□□ 1.14
LMCD1-204ENST00000426878 ADCY9O60503 1353 aa22.15■■□□□ 1.14
LMCD1-204ENST00000426878 CACNA1FO60840 1977 aa22.15■■□□□ 1.14
LMCD1-204ENST00000426878 DDX58O95786 925 aaKnown RBP22.14■■□□□ 1.14
LMCD1-204ENST00000426878 TNRC6CQ9HCJ0 1690 aaKnown RBP22.14■■□□□ 1.14
LMCD1-204ENST00000426878 SLC4A2P04920 1241 aa22.14■■□□□ 1.13
LMCD1-204ENST00000426878 ALDH1B1P30837 517 aa22.14■■□□□ 1.13
LMCD1-204ENST00000426878 PRPF40BQ6NWY9 871 aaKnown RBP22.14■■□□□ 1.13
LMCD1-204ENST00000426878 SLX4Q8IY92 1834 aa22.13■■□□□ 1.13
LMCD1-204ENST00000426878 E9PSI1 815 aa22.13■■□□□ 1.13
LMCD1-204ENST00000426878 HOXA10P31260 410 aaPredicted RBP22.13■■□□□ 1.13
LMCD1-204ENST00000426878 TRMT112Q9UI30 125 aaKnown RBP22.13■■□□□ 1.13
LMCD1-204ENST00000426878 C7orf43Q8WVR3 580 aa22.12■■□□□ 1.13
LMCD1-204ENST00000426878 NLRP3Q96P20 1036 aa22.12■■□□□ 1.13
LMCD1-204ENST00000426878 SH3TC1Q8TE82 1336 aa22.11■■□□□ 1.13
LMCD1-204ENST00000426878 ATP5J2-PTCD1G3V325 749 aa22.11■■□□□ 1.13
LMCD1-204ENST00000426878 TCERG1O14776 1098 aaKnown RBP22.11■■□□□ 1.13
LMCD1-204ENST00000426878 SOGA3Q5TF21 947 aa22.11■■□□□ 1.13
LMCD1-204ENST00000426878 KSR2Q6VAB6 950 aa22.11■■□□□ 1.13
LMCD1-204ENST00000426878 METTL22Q9BUU2 404 aaPredicted RBP22.11■■□□□ 1.13
LMCD1-204ENST00000426878 C21orf2O43822 256 aa22.1■■□□□ 1.13
LMCD1-204ENST00000426878 SLFN5Q08AF3 891 aa22.1■■□□□ 1.13
LMCD1-204ENST00000426878 SBF1O95248 1867 aa22.09■■□□□ 1.13
LMCD1-204ENST00000426878 PI4KAP2A4QPH2 592 aa22.09■■□□□ 1.13
LMCD1-204ENST00000426878 G2E3Q7L622 706 aa22.09■■□□□ 1.13
LMCD1-204ENST00000426878 PI4KAP1Q8N8J0 262 aa22.09■■□□□ 1.13
LMCD1-204ENST00000426878 NFKBIEO00221 500 aa22.08■■□□□ 1.13
LMCD1-204ENST00000426878 FLIIQ13045 1269 aa22.08■■□□□ 1.13
LMCD1-204ENST00000426878 C9orf131Q5VYM1 1079 aa22.08■■□□□ 1.13
LMCD1-204ENST00000426878 C3orf67Q6ZVT6 689 aa22.08■■□□□ 1.13
LMCD1-204ENST00000426878 SYNE4Q8N205 404 aa22.08■■□□□ 1.13
LMCD1-204ENST00000426878 CCDC191Q8NCU4 936 aa22.08■■□□□ 1.13
LMCD1-204ENST00000426878 RPGRQ92834 1020 aaKnown RBP22.08■■□□□ 1.13
LMCD1-204ENST00000426878 CRAMP1Q96RY5 1269 aa22.08■■□□□ 1.13
LMCD1-204ENST00000426878 MAP3K2Q9Y2U5 619 aa22.08■■□□□ 1.13
LMCD1-204ENST00000426878 CACNA1SQ13698 1873 aa22.07■■□□□ 1.12
LMCD1-204ENST00000426878 FER1L6Q2WGJ9 1857 aa22.07■■□□□ 1.12
LMCD1-204ENST00000426878 MYD88Q99836 296 aa22.07■■□□□ 1.12
LMCD1-204ENST00000426878 LTBP3Q9NS15 1303 aa22.07■■□□□ 1.12
LMCD1-204ENST00000426878 HCLS1P14317 486 aaPredicted RBP22.06■■□□□ 1.12
LMCD1-204ENST00000426878 LMNB1P20700 586 aa22.06■■□□□ 1.12
LMCD1-204ENST00000426878 TRMT2AQ8IZ69 625 aaKnown RBP22.06■■□□□ 1.12
LMCD1-204ENST00000426878 FAM89AQ96GI7 184 aa22.06■■□□□ 1.12
LMCD1-204ENST00000426878 RBM17Q96I25 401 aaKnown RBP22.06■■□□□ 1.12
LMCD1-204ENST00000426878 RASSF7Q02833 373 aa22.06■■□□□ 1.12
LMCD1-204ENST00000426878 ZBTB38Q8NAP3 1195 aaPredicted RBP22.06■■□□□ 1.12
LMCD1-204ENST00000426878 ZNF219Q9P2Y4 722 aaPredicted RBP22.06■■□□□ 1.12
LMCD1-204ENST00000426878 CWC25Q9NXE8 425 aaPredicted RBP22.05■■□□□ 1.12
LMCD1-204ENST00000426878 PRELPP51888 382 aa22.04■■□□□ 1.12
LMCD1-204ENST00000426878 NEXNQ0ZGT2 675 aa22.04■■□□□ 1.12
LMCD1-204ENST00000426878 CCDC93Q567U6 631 aa22.04■■□□□ 1.12
LMCD1-204ENST00000426878 RNF181Q9P0P0 153 aa22.04■■□□□ 1.12
LMCD1-204ENST00000426878 ZC3H4Q9UPT8 1303 aaKnown RBP22.03■■□□□ 1.12
LMCD1-204ENST00000426878 LAMB2P55268 1798 aa22.03■■□□□ 1.12
LMCD1-204ENST00000426878 DDX60Q8IY21 1712 aaKnown RBP22.03■■□□□ 1.12
LMCD1-204ENST00000426878 PCCAP05165 728 aaPredicted RBP22.03■■□□□ 1.12
LMCD1-204ENST00000426878 IGKV5-2P06315 115 aa22.03■■□□□ 1.12
LMCD1-204ENST00000426878 HSP90B1P14625 803 aaKnown RBP22.03■■□□□ 1.12
LMCD1-204ENST00000426878 FKBP5Q13451 457 aaPredicted RBP22.03■■□□□ 1.12
LMCD1-204ENST00000426878 CC2D2BQ6DHV5 1058 aa22.03■■□□□ 1.12
LMCD1-204ENST00000426878 CDCA7LQ96GN5 454 aa22.03■■□□□ 1.12
LMCD1-204ENST00000426878 TAOK3Q9H2K8 898 aa22.03■■□□□ 1.12
LMCD1-204ENST00000426878 SF3B3Q15393 1217 aaKnown RBP22.02■■□□□ 1.12
LMCD1-204ENST00000426878 RTKN2Q8IZC4 609 aa22.02■■□□□ 1.12
LMCD1-204ENST00000426878 ZNF428Q96B54 188 aa22.02■■□□□ 1.12
LMCD1-204ENST00000426878 IRS4O14654 1257 aaPredicted RBP22.01■■□□□ 1.11
LMCD1-204ENST00000426878 GRIPAP1Q4V328 841 aa22.01■■□□□ 1.11
LMCD1-204ENST00000426878 DNAAF4Q8WXU2 420 aa22■■□□□ 1.11
LMCD1-204ENST00000426878 SNED1Q8TER0 1413 aa22■■□□□ 1.11
LMCD1-204ENST00000426878 ABCC4O15439 1325 aa22■■□□□ 1.11
LMCD1-204ENST00000426878 CCDC88AQ3V6T2 1871 aa21.99■■□□□ 1.11
LMCD1-204ENST00000426878 NEURL1BA8MQ27 555 aa21.99■■□□□ 1.11
LMCD1-204ENST00000426878 BBOX1O75936 387 aa21.99■■□□□ 1.11
LMCD1-204ENST00000426878 DDX46Q7L014 1031 aaKnown RBP21.99■■□□□ 1.11
LMCD1-204ENST00000426878 PPEF1O14829 653 aaPredicted RBP21.98■■□□□ 1.11
LMCD1-204ENST00000426878 FKBP4Q02790 459 aaKnown RBP eCLIP21.98■■□□□ 1.11
LMCD1-204ENST00000426878 RTL5Q5HYW3 569 aaPredicted RBP21.98■■□□□ 1.11
LMCD1-204ENST00000426878 OLFM4Q6UX06 510 aa21.98■■□□□ 1.11
LMCD1-204ENST00000426878 LINS1Q8NG48 757 aa21.98■■□□□ 1.11
LMCD1-204ENST00000426878 GPBP1L1Q9HC44 474 aaPredicted RBP21.98■■□□□ 1.11
LMCD1-204ENST00000426878 CDHR2Q9BYE9 1310 aa21.98■■□□□ 1.11
LMCD1-204ENST00000426878 CT47B1P0C2W7 299 aaPredicted RBP21.97■■□□□ 1.11
LMCD1-204ENST00000426878 CWF19L2Q2TBE0 894 aaKnown RBP21.97■■□□□ 1.11
LMCD1-204ENST00000426878 DICER1Q9UPY3 1922 aaKnown RBP21.97■■□□□ 1.11
LMCD1-204ENST00000426878 GRAPQ13588 217 aa21.97■■□□□ 1.11
LMCD1-204ENST00000426878 GRAPLQ8TC17 118 aaPredicted RBP21.97■■□□□ 1.11
LMCD1-204ENST00000426878 PSMD1Q99460 953 aa21.97■■□□□ 1.11
LMCD1-204ENST00000426878 ATP6V0A2Q9Y487 856 aa21.97■■□□□ 1.11
LMCD1-204ENST00000426878 TMC4Q7Z404 712 aa21.96■■□□□ 1.11
LMCD1-204ENST00000426878 MRPL50Q8N5N7 158 aaKnown RBP21.96■■□□□ 1.11
LMCD1-204ENST00000426878 H7C1W4 665 aa21.95■■□□□ 1.1
LMCD1-204ENST00000426878 PDE8AO60658 829 aa21.95■■□□□ 1.1
LMCD1-204ENST00000426878 GCKRQ14397 625 aa21.95■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms