RNA–Protein interactions for RNA: ENST00000426511.5

SEMA3F-205, Transcript of semaphorin 3F, humanhuman

TSL 5

Gene SEMA3F, Length 757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-205ENST00000426511 C16orf71Q8IYS4 520 aaPredicted RBP28.57■■■□□ 2.16
SEMA3F-205ENST00000426511 RRAGCQ9HB90 399 aa28.57■■■□□ 2.16
SEMA3F-205ENST00000426511 HYPKQ9NX55 129 aa28.56■■■□□ 2.16
SEMA3F-205ENST00000426511 ZC3H4Q9UPT8 1303 aaKnown RBP28.56■■■□□ 2.16
SEMA3F-205ENST00000426511 SALL2Q9Y467 1007 aaPredicted RBP28.56■■■□□ 2.16
SEMA3F-205ENST00000426511 TCIRG1Q13488 830 aa28.55■■■□□ 2.16
SEMA3F-205ENST00000426511 CRY2Q49AN0 593 aa28.55■■■□□ 2.16
SEMA3F-205ENST00000426511 C8orf58Q8NAV2 365 aa28.55■■■□□ 2.16
SEMA3F-205ENST00000426511 C7orf43Q8WVR3 580 aa28.55■■■□□ 2.16
SEMA3F-205ENST00000426511 ANKRD36CQ5JPF3 1778 aa28.55■■■□□ 2.16
SEMA3F-205ENST00000426511 LTBP3Q9NS15 1303 aa28.54■■■□□ 2.16
SEMA3F-205ENST00000426511 ANKRD13DQ6ZTN6 518 aa28.54■■■□□ 2.16
SEMA3F-205ENST00000426511 NLRP10Q86W26 655 aa28.54■■■□□ 2.16
SEMA3F-205ENST00000426511 TSR2Q969E8 191 aaKnown RBP28.54■■■□□ 2.16
SEMA3F-205ENST00000426511 C3orf67Q6ZVT6 689 aa28.53■■■□□ 2.16
SEMA3F-205ENST00000426511 WWC1Q8IX03 1113 aa28.53■■■□□ 2.16
SEMA3F-205ENST00000426511 PLBD2Q8NHP8 589 aa28.53■■■□□ 2.16
SEMA3F-205ENST00000426511 NLRP3Q96P20 1036 aa28.53■■■□□ 2.16
SEMA3F-205ENST00000426511 TRMT112Q9UI30 125 aaKnown RBP28.53■■■□□ 2.16
SEMA3F-205ENST00000426511 RIC1Q4ADV7 1423 aa28.52■■■□□ 2.16
SEMA3F-205ENST00000426511 TCERG1O14776 1098 aaKnown RBP28.52■■■□□ 2.16
SEMA3F-205ENST00000426511 TOMM70O94826 608 aa28.52■■■□□ 2.16
SEMA3F-205ENST00000426511 RBM17Q96I25 401 aaKnown RBP28.52■■■□□ 2.16
SEMA3F-205ENST00000426511 GLTPD2A6NH11 291 aa28.51■■■□□ 2.15
SEMA3F-205ENST00000426511 FAM9BQ8IZU0 186 aa28.51■■■□□ 2.15
SEMA3F-205ENST00000426511 ATP5J2-PTCD1G3V325 749 aa28.5■■■□□ 2.15
SEMA3F-205ENST00000426511 HCLS1P14317 486 aaPredicted RBP28.5■■■□□ 2.15
SEMA3F-205ENST00000426511 CCDC27Q2M243 656 aa28.5■■■□□ 2.15
SEMA3F-205ENST00000426511 SYNE4Q8N205 404 aa28.5■■■□□ 2.15
SEMA3F-205ENST00000426511 FKBP4Q02790 459 aaKnown RBP eCLIP28.49■■■□□ 2.15
SEMA3F-205ENST00000426511 GOLGA2Q08379 1002 aa28.49■■■□□ 2.15
SEMA3F-205ENST00000426511 DPY19L2Q6NUT2 758 aa28.49■■■□□ 2.15
SEMA3F-205ENST00000426511 RTKN2Q8IZC4 609 aa28.49■■■□□ 2.15
SEMA3F-205ENST00000426511 PHAXQ9H814 394 aaKnown RBP28.49■■■□□ 2.15
SEMA3F-205ENST00000426511 ZNF277Q9NRM2 450 aaPredicted RBP28.49■■■□□ 2.15
SEMA3F-205ENST00000426511 HOXA10P31260 410 aaPredicted RBP28.48■■■□□ 2.15
SEMA3F-205ENST00000426511 RIC3Q7Z5B4 369 aa28.48■■■□□ 2.15
SEMA3F-205ENST00000426511 TSPYL6Q8N831 410 aa28.48■■■□□ 2.15
SEMA3F-205ENST00000426511 RNF123Q5XPI4 1314 aa28.47■■■□□ 2.15
SEMA3F-205ENST00000426511 SH3TC1Q8TE82 1336 aa28.47■■■□□ 2.15
SEMA3F-205ENST00000426511 DICER1Q9UPY3 1922 aaKnown RBP28.46■■■□□ 2.15
SEMA3F-205ENST00000426511 PPEF1O14829 653 aaPredicted RBP28.46■■■□□ 2.15
SEMA3F-205ENST00000426511 HSPA6P17066 643 aa28.46■■■□□ 2.15
SEMA3F-205ENST00000426511 SLC10A5Q5PT55 438 aa28.46■■■□□ 2.15
SEMA3F-205ENST00000426511 CCDC30Q5VVM6 783 aa28.46■■■□□ 2.15
SEMA3F-205ENST00000426511 CRAMP1Q96RY5 1269 aa28.46■■■□□ 2.15
SEMA3F-205ENST00000426511 RTL5Q5HYW3 569 aaPredicted RBP28.44■■■□□ 2.14
SEMA3F-205ENST00000426511 SLC51AQ86UW1 340 aa28.44■■■□□ 2.14
SEMA3F-205ENST00000426511 VEGFAP15692 232 aaPredicted RBP28.43■■■□□ 2.14
SEMA3F-205ENST00000426511 RBM46Q8TBY0 533 aaKnown RBP28.43■■■□□ 2.14
SEMA3F-205ENST00000426511 ISCA1Q9BUE6 129 aa28.43■■■□□ 2.14
SEMA3F-205ENST00000426511 CHMP4AQ9BY43 222 aa28.43■■■□□ 2.14
SEMA3F-205ENST00000426511 FAM89AQ96GI7 184 aa28.42■■■□□ 2.14
SEMA3F-205ENST00000426511 TMX4Q9H1E5 349 aaPredicted RBP28.42■■■□□ 2.14
SEMA3F-205ENST00000426511 ABCC4O15439 1325 aa28.42■■■□□ 2.14
SEMA3F-205ENST00000426511 IL16Q14005 1332 aa28.42■■■□□ 2.14
SEMA3F-205ENST00000426511 DDNO94850 711 aaPredicted RBP28.41■■■□□ 2.14
SEMA3F-205ENST00000426511 TWISTNBQ3B726 338 aaPredicted RBP28.41■■■□□ 2.14
SEMA3F-205ENST00000426511 CC2D2BQ6DHV5 1058 aa28.41■■■□□ 2.14
SEMA3F-205ENST00000426511 MYD88Q99836 296 aa28.41■■■□□ 2.14
SEMA3F-205ENST00000426511 IARSP41252 1262 aaKnown RBP28.4■■■□□ 2.14
SEMA3F-205ENST00000426511 STK31Q9BXU1 1019 aa28.4■■■□□ 2.14
SEMA3F-205ENST00000426511 LAMB2P55268 1798 aa28.39■■■□□ 2.14
SEMA3F-205ENST00000426511 DDX58O95786 925 aaKnown RBP28.39■■■□□ 2.14
SEMA3F-205ENST00000426511 DDX46Q7L014 1031 aaKnown RBP28.39■■■□□ 2.14
SEMA3F-205ENST00000426511 PSMD1Q99460 953 aa28.38■■■□□ 2.13
SEMA3F-205ENST00000426511 FANCIQ9NVI1 1328 aa28.38■■■□□ 2.13
SEMA3F-205ENST00000426511 NCBP3Q53F19 620 aaKnown RBP28.37■■■□□ 2.13
SEMA3F-205ENST00000426511 WDR63Q8IWG1 891 aa28.36■■■□□ 2.13
SEMA3F-205ENST00000426511 SNED1Q8TER0 1413 aa28.35■■■□□ 2.13
SEMA3F-205ENST00000426511 WDR90Q96KV7 1748 aa28.35■■■□□ 2.13
SEMA3F-205ENST00000426511 FSTL1Q12841 308 aa28.35■■■□□ 2.13
SEMA3F-205ENST00000426511 SMC1BQ8NDV3 1235 aa28.35■■■□□ 2.13
SEMA3F-205ENST00000426511 JDP2Q8WYK2 163 aa28.35■■■□□ 2.13
SEMA3F-205ENST00000426511 ATP6V0A2Q9Y487 856 aa28.35■■■□□ 2.13
SEMA3F-205ENST00000426511 ZNF541Q9H0D2 1346 aa28.35■■■□□ 2.13
SEMA3F-205ENST00000426511 POTECB2RU33 542 aa28.34■■■□□ 2.13
SEMA3F-205ENST00000426511 IRS4O14654 1257 aaPredicted RBP28.34■■■□□ 2.13
SEMA3F-205ENST00000426511 TRIM28Q13263 835 aaKnown RBP28.34■■■□□ 2.13
SEMA3F-205ENST00000426511 GRIPAP1Q4V328 841 aa28.34■■■□□ 2.13
SEMA3F-205ENST00000426511 MAP3K2Q9Y2U5 619 aa28.34■■■□□ 2.13
SEMA3F-205ENST00000426511 DDX60Q8IY21 1712 aaKnown RBP28.34■■■□□ 2.13
SEMA3F-205ENST00000426511 BBOX1O75936 387 aa28.33■■■□□ 2.13
SEMA3F-205ENST00000426511 GRAPQ13588 217 aa28.33■■■□□ 2.13
SEMA3F-205ENST00000426511 LARGE2Q8N3Y3 721 aa28.33■■■□□ 2.13
SEMA3F-205ENST00000426511 GRAPLQ8TC17 118 aaPredicted RBP28.33■■■□□ 2.13
SEMA3F-205ENST00000426511 APLP1P51693 650 aa28.32■■■□□ 2.12
SEMA3F-205ENST00000426511 JARID2Q92833 1246 aaPredicted RBP28.32■■■□□ 2.12
SEMA3F-205ENST00000426511 METTL22Q9BUU2 404 aaPredicted RBP28.32■■■□□ 2.12
SEMA3F-205ENST00000426511 CEP350Q5VT06 3117 aa28.32■■■□□ 2.12
SEMA3F-205ENST00000426511 PI4KAP2A4QPH2 592 aa28.31■■■□□ 2.12
SEMA3F-205ENST00000426511 SLC4A2P04920 1241 aa28.31■■■□□ 2.12
SEMA3F-205ENST00000426511 PI4KAP1Q8N8J0 262 aa28.31■■■□□ 2.12
SEMA3F-205ENST00000426511 ZBTB38Q8NAP3 1195 aaPredicted RBP28.31■■■□□ 2.12
SEMA3F-205ENST00000426511 CWC25Q9NXE8 425 aaPredicted RBP28.31■■■□□ 2.12
SEMA3F-205ENST00000426511 EXOSC9Q06265 439 aaKnown RBP28.3■■■□□ 2.12
SEMA3F-205ENST00000426511 DPP8Q6V1X1 898 aaPredicted RBP28.3■■■□□ 2.12
SEMA3F-205ENST00000426511 KSR2Q6VAB6 950 aa28.3■■■□□ 2.12
SEMA3F-205ENST00000426511 G2E3Q7L622 706 aa28.3■■■□□ 2.12
SEMA3F-205ENST00000426511 CCDC191Q8NCU4 936 aa28.3■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms