RNA–Protein interactions for RNA: ENST00000425436.7

SHOX2-202, Transcript of short stature homeobox 2, humanhuman

TSL 5 BASIC

Gene SHOX2, Length 1,513 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-202ENST00000425436 ISCA1Q9BUE6 129 aa19.71■□□□□ 0.75
SHOX2-202ENST00000425436 KIF16BQ96L93 1317 aa19.7■□□□□ 0.74
SHOX2-202ENST00000425436 SLC4A10Q6U841 1118 aa19.7■□□□□ 0.74
SHOX2-202ENST00000425436 NLRP10Q86W26 655 aa19.7■□□□□ 0.74
SHOX2-202ENST00000425436 PTPRCP08575 1304 aa19.69■□□□□ 0.74
SHOX2-202ENST00000425436 NPHP1O15259 732 aa19.69■□□□□ 0.74
SHOX2-202ENST00000425436 IGKV5-2P06315 115 aa19.68■□□□□ 0.74
SHOX2-202ENST00000425436 NEXNQ0ZGT2 675 aa19.68■□□□□ 0.74
SHOX2-202ENST00000425436 CWF19L2Q2TBE0 894 aaKnown RBP19.68■□□□□ 0.74
SHOX2-202ENST00000425436 PRR5LQ6MZQ0 368 aa19.68■□□□□ 0.74
SHOX2-202ENST00000425436 TPTE2Q6XPS3 522 aa19.68■□□□□ 0.74
SHOX2-202ENST00000425436 NUTM1Q86Y26 1132 aa19.68■□□□□ 0.74
SHOX2-202ENST00000425436 LRP5O75197 1615 aa19.67■□□□□ 0.74
SHOX2-202ENST00000425436 GTF2E1P29083 439 aaPredicted RBP19.67■□□□□ 0.74
SHOX2-202ENST00000425436 PARP10Q53GL7 1025 aa19.67■□□□□ 0.74
SHOX2-202ENST00000425436 RTL5Q5HYW3 569 aaPredicted RBP19.67■□□□□ 0.74
SHOX2-202ENST00000425436 DZIP1LQ8IYY4 767 aaKnown RBP19.67■□□□□ 0.74
SHOX2-202ENST00000425436 CNBD1Q8NA66 436 aa19.67■□□□□ 0.74
SHOX2-202ENST00000425436 FHDC1Q9C0D6 1143 aaPredicted RBP19.67■□□□□ 0.74
SHOX2-202ENST00000425436 RBM19Q9Y4C8 960 aaKnown RBP19.67■□□□□ 0.74
SHOX2-202ENST00000425436 ERFEQ4G0M1 354 aa19.66■□□□□ 0.74
SHOX2-202ENST00000425436 PPP1R42Q7Z4L9 355 aa19.66■□□□□ 0.74
SHOX2-202ENST00000425436 FTSJ3Q8IY81 847 aaKnown RBP19.66■□□□□ 0.74
SHOX2-202ENST00000425436 SYNE4Q8N205 404 aa19.66■□□□□ 0.74
SHOX2-202ENST00000425436 JARID2Q92833 1246 aaPredicted RBP19.66■□□□□ 0.74
SHOX2-202ENST00000425436 CLUAP1Q96AJ1 413 aa19.66■□□□□ 0.74
SHOX2-202ENST00000425436 UTP14AQ9BVJ6 771 aaKnown RBP19.66■□□□□ 0.74
SHOX2-202ENST00000425436 TNNQ9UQP3 1299 aa19.66■□□□□ 0.74
SHOX2-202ENST00000425436 KDM2BQ8NHM5 1336 aa19.66■□□□□ 0.74
SHOX2-202ENST00000425436 NRXN2Q9P2S2 1712 aa19.66■□□□□ 0.74
SHOX2-202ENST00000425436 NTSR2O95665 410 aa19.66■□□□□ 0.74
SHOX2-202ENST00000425436 TRIM28Q13263 835 aaKnown RBP19.66■□□□□ 0.74
SHOX2-202ENST00000425436 BEND3Q5T5X7 828 aa19.66■□□□□ 0.74
SHOX2-202ENST00000425436 PANK1Q8TE04 598 aa19.66■□□□□ 0.74
SHOX2-202ENST00000425436 ARHGAP45Q92619 1136 aa19.66■□□□□ 0.74
SHOX2-202ENST00000425436 TRMT112Q9UI30 125 aaKnown RBP19.66■□□□□ 0.74
SHOX2-202ENST00000425436 NEURL1BA8MQ27 555 aa19.65■□□□□ 0.74
SHOX2-202ENST00000425436 ATF7IPQ6VMQ6 1270 aa19.65■□□□□ 0.74
SHOX2-202ENST00000425436 FAM89AQ96GI7 184 aa19.65■□□□□ 0.74
SHOX2-202ENST00000425436 NYXQ9GZU5 481 aa19.65■□□□□ 0.74
SHOX2-202ENST00000425436 CHMP4BQ9H444 224 aaKnown RBP19.65■□□□□ 0.74
SHOX2-202ENST00000425436 CWC25Q9NXE8 425 aaPredicted RBP19.65■□□□□ 0.74
SHOX2-202ENST00000425436 COG6Q9Y2V7 657 aa19.65■□□□□ 0.74
SHOX2-202ENST00000425436 CCDC191Q8NCU4 936 aa19.64■□□□□ 0.73
SHOX2-202ENST00000425436 LINS1Q8NG48 757 aa19.64■□□□□ 0.73
SHOX2-202ENST00000425436 API5Q9BZZ5 524 aaKnown RBP19.64■□□□□ 0.73
SHOX2-202ENST00000425436 ST5P78524 1137 aa19.63■□□□□ 0.73
SHOX2-202ENST00000425436 MVPQ14764 893 aaKnown RBP19.63■□□□□ 0.73
SHOX2-202ENST00000425436 TRIM27P14373 513 aa19.62■□□□□ 0.73
SHOX2-202ENST00000425436 NLGN2Q8NFZ4 835 aa19.62■□□□□ 0.73
SHOX2-202ENST00000425436 SYT17Q9BSW7 474 aa19.62■□□□□ 0.73
SHOX2-202ENST00000425436 CD2APQ9Y5K6 639 aa19.62■□□□□ 0.73
SHOX2-202ENST00000425436 GCKRQ14397 625 aa19.61■□□□□ 0.73
SHOX2-202ENST00000425436 C10orf71Q711Q0 1435 aa19.61■□□□□ 0.73
SHOX2-202ENST00000425436 SRCIN1Q9C0H9 1055 aa19.61■□□□□ 0.73
SHOX2-202ENST00000425436 DDX19BQ9UMR2 479 aa19.61■□□□□ 0.73
SHOX2-202ENST00000425436 ANKRD31Q8N7Z5 1873 aa19.61■□□□□ 0.73
SHOX2-202ENST00000425436 ABCC12Q96J65 1359 aa19.61■□□□□ 0.73
SHOX2-202ENST00000425436 SH3TC1Q8TE82 1336 aa19.61■□□□□ 0.73
SHOX2-202ENST00000425436 A0A0G2JLW4 131 aa19.61■□□□□ 0.73
SHOX2-202ENST00000425436 HCLS1P14317 486 aaPredicted RBP19.61■□□□□ 0.73
SHOX2-202ENST00000425436 BRIP1Q9BX63 1249 aa19.61■□□□□ 0.73
SHOX2-202ENST00000425436 CHRNA5P30532 468 aa19.6■□□□□ 0.73
SHOX2-202ENST00000425436 ZBTB38Q8NAP3 1195 aaPredicted RBP19.6■□□□□ 0.73
SHOX2-202ENST00000425436 KIF13BQ9NQT8 1826 aa19.6■□□□□ 0.73
SHOX2-202ENST00000425436 GOLGB1Q14789 3259 aaKnown RBP19.59■□□□□ 0.73
SHOX2-202ENST00000425436 IBTKQ9P2D0 1353 aaPredicted RBP19.59■□□□□ 0.73
SHOX2-202ENST00000425436 N4BP2Q86UW6 1770 aaPredicted RBP19.59■□□□□ 0.73
SHOX2-202ENST00000425436 WWC3Q9ULE0 1092 aa19.59■□□□□ 0.73
SHOX2-202ENST00000425436 ALDH1L1O75891 902 aa19.58■□□□□ 0.73
SHOX2-202ENST00000425436 PCCAP05165 728 aaPredicted RBP19.58■□□□□ 0.73
SHOX2-202ENST00000425436 RLBP1P12271 317 aa19.58■□□□□ 0.73
SHOX2-202ENST00000425436 DPEP1P16444 411 aa19.58■□□□□ 0.73
SHOX2-202ENST00000425436 SLC10A5Q5PT55 438 aa19.58■□□□□ 0.73
SHOX2-202ENST00000425436 C3orf67Q6ZVT6 689 aa19.58■□□□□ 0.73
SHOX2-202ENST00000425436 UBE3BQ7Z3V4 1068 aa19.58■□□□□ 0.73
SHOX2-202ENST00000425436 H7C1W4 665 aa19.57■□□□□ 0.72
SHOX2-202ENST00000425436 IRS4O14654 1257 aaPredicted RBP19.57■□□□□ 0.72
SHOX2-202ENST00000425436 PDE6BP35913 854 aa19.57■□□□□ 0.72
SHOX2-202ENST00000425436 C2CD5Q86YS7 1000 aa19.57■□□□□ 0.72
SHOX2-202ENST00000425436 RWDD1Q9H446 243 aaPredicted RBP19.57■□□□□ 0.72
SHOX2-202ENST00000425436 C9orf78Q9NZ63 289 aaPredicted RBP19.57■□□□□ 0.72
SHOX2-202ENST00000425436 ABCC4O15439 1325 aa19.57■□□□□ 0.72
SHOX2-202ENST00000425436 CCT4P50991 539 aaKnown RBP19.56■□□□□ 0.72
SHOX2-202ENST00000425436 TGFB2P61812 414 aa19.56■□□□□ 0.72
SHOX2-202ENST00000425436 TNRC6CQ9HCJ0 1690 aaKnown RBP19.56■□□□□ 0.72
SHOX2-202ENST00000425436 H0YIN7 160 aa19.56■□□□□ 0.72
SHOX2-202ENST00000425436 KCNA3P22001 575 aa19.56■□□□□ 0.72
SHOX2-202ENST00000425436 TMEM57Q8N5G2 664 aa19.56■□□□□ 0.72
SHOX2-202ENST00000425436 NLRP3Q96P20 1036 aa19.56■□□□□ 0.72
SHOX2-202ENST00000425436 GRM8O00222 908 aa19.55■□□□□ 0.72
SHOX2-202ENST00000425436 NBPF7P0C2Y1 421 aaPredicted RBP19.55■□□□□ 0.72
SHOX2-202ENST00000425436 CASP7P55210 303 aa19.55■□□□□ 0.72
SHOX2-202ENST00000425436 INTS3Q68E01 1043 aaKnown RBP19.55■□□□□ 0.72
SHOX2-202ENST00000425436 DDX60Q8IY21 1712 aaKnown RBP19.55■□□□□ 0.72
SHOX2-202ENST00000425436 KIAA1551Q9HCM1 1747 aa19.55■□□□□ 0.72
SHOX2-202ENST00000425436 PXDNLA1KZ92 1463 aa19.54■□□□□ 0.72
SHOX2-202ENST00000425436 ZNF622Q969S3 477 aaKnown RBP eCLIP19.54■□□□□ 0.72
SHOX2-202ENST00000425436 USP44Q9H0E7 712 aa19.54■□□□□ 0.72
SHOX2-202ENST00000425436 KLRG2A4D1S0 409 aaPredicted RBP19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms