RNA–Protein interactions for RNA: ENST00000424924.5

SHANK2-206, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 5

Gene SHANK2, Length 6,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-206ENST00000424924 TMEM110-MUSTN1A8MSY1 372 aa12.13□□□□□ -0.47
SHANK2-206ENST00000424924 STAC3Q96MF2 364 aa12.13□□□□□ -0.47
SHANK2-206ENST00000424924 SAP30BPQ9UHR5 308 aaKnown RBP12.13□□□□□ -0.47
SHANK2-206ENST00000424924 KIAA1107Q9UPP5 1409 aa12.13□□□□□ -0.47
SHANK2-206ENST00000424924 ATAD2Q6PL18 1390 aa12.13□□□□□ -0.47
SHANK2-206ENST00000424924 LMTK3Q96Q04 1460 aa12.13□□□□□ -0.47
SHANK2-206ENST00000424924 PCF11O94913 1555 aaKnown RBP12.13□□□□□ -0.47
SHANK2-206ENST00000424924 LRRC2Q9BYS8 371 aa12.13□□□□□ -0.47
SHANK2-206ENST00000424924 CNNM3Q8NE01 707 aa12.13□□□□□ -0.47
SHANK2-206ENST00000424924 CCDC148Q8NFR7 591 aa12.13□□□□□ -0.47
SHANK2-206ENST00000424924 CRNKL1Q9BZJ0 848 aaKnown RBP12.13□□□□□ -0.47
SHANK2-206ENST00000424924 EFCAB5A4FU69 1503 aa12.13□□□□□ -0.47
SHANK2-206ENST00000424924 CCDC196A0A1B0GTZ2 297 aa12.13□□□□□ -0.47
SHANK2-206ENST00000424924 SIRT1Q96EB6 747 aa12.13□□□□□ -0.47
SHANK2-206ENST00000424924 SMTNL1A8MU46 457 aa12.12□□□□□ -0.47
SHANK2-206ENST00000424924 HSP90AA4PQ58FG1 418 aa12.12□□□□□ -0.47
SHANK2-206ENST00000424924 CCDC174Q6PII3 467 aa12.12□□□□□ -0.47
SHANK2-206ENST00000424924 SLC4A4Q9Y6R1 1079 aa12.12□□□□□ -0.47
SHANK2-206ENST00000424924 LDHCP07864 332 aa12.12□□□□□ -0.47
SHANK2-206ENST00000424924 WDR63Q8IWG1 891 aa12.12□□□□□ -0.47
SHANK2-206ENST00000424924 GINS2Q9Y248 185 aa12.12□□□□□ -0.47
SHANK2-206ENST00000424924 ARHGEF11O15085 1522 aa12.12□□□□□ -0.47
SHANK2-206ENST00000424924 ATXN8OSP0DMR3 200 aa12.12□□□□□ -0.47
SHANK2-206ENST00000424924 IFFO1Q0D2I5 559 aa12.12□□□□□ -0.47
SHANK2-206ENST00000424924 LUZP1Q86V48 1076 aa12.12□□□□□ -0.47
SHANK2-206ENST00000424924 RNF41Q9H4P4 317 aaPredicted RBP12.12□□□□□ -0.47
SHANK2-206ENST00000424924 CWC15Q9P013 229 aaKnown RBP12.12□□□□□ -0.47
SHANK2-206ENST00000424924 RTCBQ9Y3I0 505 aaKnown RBP12.12□□□□□ -0.47
SHANK2-206ENST00000424924 SUPT6HQ7KZ85 1726 aaKnown RBP12.12□□□□□ -0.47
SHANK2-206ENST00000424924 GLRX3O76003 335 aaKnown RBP12.12□□□□□ -0.47
SHANK2-206ENST00000424924 NOD1Q9Y239 953 aa12.12□□□□□ -0.47
SHANK2-206ENST00000424924 RAB11FIP3O75154 756 aa12.11□□□□□ -0.47
SHANK2-206ENST00000424924 GPR162Q16538 588 aa12.11□□□□□ -0.47
SHANK2-206ENST00000424924 ZSCAN31Q96LW9 406 aaPredicted RBP12.11□□□□□ -0.47
SHANK2-206ENST00000424924 UIMC1Q96RL1 719 aa12.11□□□□□ -0.47
SHANK2-206ENST00000424924 LRRC59Q96AG4 307 aaKnown RBP12.11□□□□□ -0.47
SHANK2-206ENST00000424924 NLRP3Q96P20 1036 aa12.11□□□□□ -0.47
SHANK2-206ENST00000424924 TFIP11Q9UBB9 837 aaKnown RBP12.11□□□□□ -0.47
SHANK2-206ENST00000424924 RAB3GAP1Q15042 981 aa12.11□□□□□ -0.47
SHANK2-206ENST00000424924 SYCE3A1L190 88 aa12.11□□□□□ -0.47
SHANK2-206ENST00000424924 MRE11P49959 708 aa12.11□□□□□ -0.47
SHANK2-206ENST00000424924 ERICH4A6NGS2 130 aa12.11□□□□□ -0.47
SHANK2-206ENST00000424924 HARSP12081 509 aaKnown RBP12.11□□□□□ -0.47
SHANK2-206ENST00000424924 VPS36Q86VN1 386 aa12.11□□□□□ -0.47
SHANK2-206ENST00000424924 WASLO00401 505 aaPredicted RBP12.11□□□□□ -0.47
SHANK2-206ENST00000424924 MYCP01106 439 aaPredicted RBP12.11□□□□□ -0.47
SHANK2-206ENST00000424924 SPOUT1Q5T280 376 aaKnown RBP12.11□□□□□ -0.47
SHANK2-206ENST00000424924 MIGA1Q8NAN2 632 aa12.11□□□□□ -0.47
SHANK2-206ENST00000424924 TCP11L1Q9NUJ3 509 aa12.11□□□□□ -0.47
SHANK2-206ENST00000424924 MRVI1Q9Y6F6 885 aa12.11□□□□□ -0.47
SHANK2-206ENST00000424924 IFIT1BQ5T764 474 aaKnown RBP12.1□□□□□ -0.47
SHANK2-206ENST00000424924 MSL1Q68DK7 614 aa12.1□□□□□ -0.47
SHANK2-206ENST00000424924 FNBP4Q8N3X1 1017 aaPredicted RBP12.1□□□□□ -0.47
SHANK2-206ENST00000424924 ZC3H12CQ9C0D7 883 aaKnown RBP12.1□□□□□ -0.47
SHANK2-206ENST00000424924 USP16Q9Y5T5 823 aa12.1□□□□□ -0.47
SHANK2-206ENST00000424924 HFM1A2PYH4 1435 aa12.1□□□□□ -0.47
SHANK2-206ENST00000424924 GNPATO15228 680 aa12.1□□□□□ -0.47
SHANK2-206ENST00000424924 GSTO1P78417 241 aa12.1□□□□□ -0.47
SHANK2-206ENST00000424924 TBCAO75347 108 aaKnown RBP12.1□□□□□ -0.47
SHANK2-206ENST00000424924 CASQ1P31415 396 aa12.1□□□□□ -0.47
SHANK2-206ENST00000424924 SMARCC2Q8TAQ2 1214 aa12.1□□□□□ -0.47
SHANK2-206ENST00000424924 PI4KAP2A4QPH2 592 aa12.1□□□□□ -0.47
SHANK2-206ENST00000424924 KIF5BP33176 963 aa12.1□□□□□ -0.47
SHANK2-206ENST00000424924 IQCEQ6IPM2 695 aa12.1□□□□□ -0.47
SHANK2-206ENST00000424924 PI4KAP1Q8N8J0 262 aa12.1□□□□□ -0.47
SHANK2-206ENST00000424924 DBF4Q9UBU7 674 aaPredicted RBP12.1□□□□□ -0.47
SHANK2-206ENST00000424924 METAP2P50579 478 aaKnown RBP eCLIP12.09□□□□□ -0.47
SHANK2-206ENST00000424924 STAMBPO95630 424 aa12.09□□□□□ -0.47
SHANK2-206ENST00000424924 AFMP43652 599 aa12.09□□□□□ -0.47
SHANK2-206ENST00000424924 ZNF804AQ7Z570 1209 aa12.09□□□□□ -0.47
SHANK2-206ENST00000424924 CADPS2Q86UW7 1296 aa12.09□□□□□ -0.47
SHANK2-206ENST00000424924 INCENPQ9NQS7 918 aa12.09□□□□□ -0.47
SHANK2-206ENST00000424924 CETN1Q12798 172 aa12.09□□□□□ -0.47
SHANK2-206ENST00000424924 MAP3K11Q16584 847 aa12.09□□□□□ -0.47
SHANK2-206ENST00000424924 DZIP3Q86Y13 1208 aaKnown RBP12.09□□□□□ -0.47
SHANK2-206ENST00000424924 TRMT1Q9NXH9 659 aaKnown RBP12.09□□□□□ -0.47
SHANK2-206ENST00000424924 CHPF2Q9P2E5 772 aa12.09□□□□□ -0.47
SHANK2-206ENST00000424924 EIF6P56537 245 aaKnown RBP12.09□□□□□ -0.47
SHANK2-206ENST00000424924 GDPD2Q9HCC8 539 aa12.09□□□□□ -0.47
SHANK2-206ENST00000424924 ACEP12821 1306 aa12.09□□□□□ -0.47
SHANK2-206ENST00000424924 GOLGA6L7A0A1B0GV03 622 aa12.08□□□□□ -0.48
SHANK2-206ENST00000424924 STX6O43752 255 aa12.08□□□□□ -0.48
SHANK2-206ENST00000424924 CBX1P83916 185 aa12.08□□□□□ -0.48
SHANK2-206ENST00000424924 TTF1Q15361 905 aaPredicted RBP12.08□□□□□ -0.48
SHANK2-206ENST00000424924 APBB1IPQ7Z5R6 666 aaPredicted RBP12.08□□□□□ -0.48
SHANK2-206ENST00000424924 ARID5AQ03989 594 aa12.08□□□□□ -0.48
SHANK2-206ENST00000424924 PDE3AQ14432 1141 aa12.08□□□□□ -0.48
SHANK2-206ENST00000424924 NAA16Q6N069 864 aaPredicted RBP12.08□□□□□ -0.48
SHANK2-206ENST00000424924 CEP63Q96MT8 703 aa12.08□□□□□ -0.48
SHANK2-206ENST00000424924 FGFR1OPO95684 399 aaKnown RBP12.08□□□□□ -0.48
SHANK2-206ENST00000424924 NCBP1Q09161 790 aaKnown RBP12.08□□□□□ -0.48
SHANK2-206ENST00000424924 PLIN2Q99541 437 aa12.08□□□□□ -0.48
SHANK2-206ENST00000424924 SNRPA1P09661 255 aaKnown RBP12.07□□□□□ -0.48
SHANK2-206ENST00000424924 HLTFQ14527 1009 aaKnown RBP eCLIP12.07□□□□□ -0.483e-8■■■□□ 18.2
SHANK2-206ENST00000424924 XAGE3Q8WTP9 111 aa12.07□□□□□ -0.48
SHANK2-206ENST00000424924 FAM170AA1A519 330 aa12.07□□□□□ -0.48
SHANK2-206ENST00000424924 SORBS3O60504 671 aa12.07□□□□□ -0.48
SHANK2-206ENST00000424924 RBM25P49756 843 aaKnown RBP12.07□□□□□ -0.48
SHANK2-206ENST00000424924 CHST3Q7LGC8 479 aa12.07□□□□□ -0.48
SHANK2-206ENST00000424924 IARSP41252 1262 aaKnown RBP12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 90 ms