RNA–Protein interactions for RNA: ENST00000424846.3

TPM3P9-201, Transcript of tropomyosin 3 pseudogene 9, humanhuman

TSL 1 (best) BASIC

Gene TPM3P9, Length 2,920 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3P9-201ENST00000424846 MYRIPQ8NFW9 859 aa16.96■□□□□ 0.3
TPM3P9-201ENST00000424846 KCNB2Q92953 911 aa16.96■□□□□ 0.3
TPM3P9-201ENST00000424846 BOLA2Q9H3K6 86 aa16.96■□□□□ 0.3
TPM3P9-201ENST00000424846 KIF13AQ9H1H9 1805 aa16.96■□□□□ 0.3
TPM3P9-201ENST00000424846 HSP90AB4PQ58FF6 505 aa16.95■□□□□ 0.3
TPM3P9-201ENST00000424846 BICC1Q9H694 974 aaKnown RBP16.95■□□□□ 0.3
TPM3P9-201ENST00000424846 KCNJ4P48050 445 aa16.95■□□□□ 0.3
TPM3P9-201ENST00000424846 TFIP11Q9UBB9 837 aaKnown RBP16.95■□□□□ 0.3
TPM3P9-201ENST00000424846 NDUFB9Q9Y6M9 179 aa16.95■□□□□ 0.3
TPM3P9-201ENST00000424846 SLC27A2O14975 620 aa16.94■□□□□ 0.3
TPM3P9-201ENST00000424846 STK3Q13188 491 aa16.94■□□□□ 0.3
TPM3P9-201ENST00000424846 ZNF589Q86UQ0 364 aaPredicted RBP16.94■□□□□ 0.3
TPM3P9-201ENST00000424846 RUFY2Q8WXA3 655 aa16.94■□□□□ 0.3
TPM3P9-201ENST00000424846 LARP1BQ659C4 914 aaKnown RBP16.94■□□□□ 0.3
TPM3P9-201ENST00000424846 DBF4Q9UBU7 674 aaPredicted RBP16.94■□□□□ 0.3
TPM3P9-201ENST00000424846 GIGYF1O75420 1035 aaPredicted RBP16.93■□□□□ 0.3
TPM3P9-201ENST00000424846 CKAP2LQ8IYA6 745 aa16.93■□□□□ 0.3
TPM3P9-201ENST00000424846 MAP4K1Q92918 833 aa16.93■□□□□ 0.3
TPM3P9-201ENST00000424846 EVI5LQ96CN4 794 aa16.93■□□□□ 0.3
TPM3P9-201ENST00000424846 TM6SF1Q9BZW5 370 aa16.93■□□□□ 0.3
TPM3P9-201ENST00000424846 ATP6V1DQ9Y5K8 247 aa16.93■□□□□ 0.3
TPM3P9-201ENST00000424846 ARHGAP23Q9P227 1491 aa16.93■□□□□ 0.3
TPM3P9-201ENST00000424846 LETM1O95202 739 aaPredicted RBP16.93■□□□□ 0.3
TPM3P9-201ENST00000424846 HOXB7P09629 217 aa16.93■□□□□ 0.3
TPM3P9-201ENST00000424846 KSR2Q6VAB6 950 aa16.93■□□□□ 0.3
TPM3P9-201ENST00000424846 LUZP1Q86V48 1076 aa16.93■□□□□ 0.3
TPM3P9-201ENST00000424846 PHF8Q9UPP1 1060 aa16.93■□□□□ 0.3
TPM3P9-201ENST00000424846 RNMTO43148 476 aaKnown RBP16.92■□□□□ 0.3
TPM3P9-201ENST00000424846 SH2B1Q9NRF2 756 aaPredicted RBP16.92■□□□□ 0.3
TPM3P9-201ENST00000424846 SLIT1O75093 1534 aa16.92■□□□□ 0.3
TPM3P9-201ENST00000424846 NPHP4O75161 1426 aaPredicted RBP16.92■□□□□ 0.3
TPM3P9-201ENST00000424846 LARP1Q6PKG0 1096 aaKnown RBP16.92■□□□□ 0.3
TPM3P9-201ENST00000424846 ZSCAN31Q96LW9 406 aaPredicted RBP16.92■□□□□ 0.3
TPM3P9-201ENST00000424846 PRDM10Q9NQV6 1147 aa16.92■□□□□ 0.3
TPM3P9-201ENST00000424846 SPTLC3Q9NUV7 552 aa16.92■□□□□ 0.3
TPM3P9-201ENST00000424846 ZKSCAN1P17029 563 aaPredicted RBP16.91■□□□□ 0.3
TPM3P9-201ENST00000424846 TOB2Q14106 344 aaPredicted RBP16.91■□□□□ 0.3
TPM3P9-201ENST00000424846 AKAP4Q5JQC9 854 aa16.91■□□□□ 0.3
TPM3P9-201ENST00000424846 EPHA10Q5JZY3 1008 aa16.91■□□□□ 0.3
TPM3P9-201ENST00000424846 KIAA1524Q8TCG1 905 aa16.91■□□□□ 0.3
TPM3P9-201ENST00000424846 MRVI1Q9Y6F6 885 aa16.91■□□□□ 0.3
TPM3P9-201ENST00000424846 ANKARQ7Z5J8 1434 aa16.91■□□□□ 0.3
TPM3P9-201ENST00000424846 MAP7D2Q96T17 732 aa16.9■□□□□ 0.3
TPM3P9-201ENST00000424846 NFAT5O94916 1531 aa16.9■□□□□ 0.3
TPM3P9-201ENST00000424846 GRM8O00222 908 aa16.9■□□□□ 0.3
TPM3P9-201ENST00000424846 JAK2O60674 1132 aa16.9■□□□□ 0.3
TPM3P9-201ENST00000424846 COL15A1P39059 1388 aa16.9■□□□□ 0.3
TPM3P9-201ENST00000424846 IGKV5-2P06315 115 aa16.9■□□□□ 0.3
TPM3P9-201ENST00000424846 FSD1Q9BTV5 496 aa16.9■□□□□ 0.3
TPM3P9-201ENST00000424846 DACT1Q9NYF0 836 aa16.9■□□□□ 0.3
TPM3P9-201ENST00000424846 ALDH1L1O75891 902 aa16.89■□□□□ 0.29
TPM3P9-201ENST00000424846 PTGS1P23219 599 aa16.89■□□□□ 0.29
TPM3P9-201ENST00000424846 PIP4K2AP48426 406 aaPredicted RBP16.89■□□□□ 0.29
TPM3P9-201ENST00000424846 SLC39A6Q13433 755 aa16.89■□□□□ 0.29
TPM3P9-201ENST00000424846 DDX11Q96FC9 970 aa16.89■□□□□ 0.29
TPM3P9-201ENST00000424846 GPATCH3Q96I76 525 aa16.89■□□□□ 0.29
TPM3P9-201ENST00000424846 TYRO3Q06418 890 aa16.89■□□□□ 0.29
TPM3P9-201ENST00000424846 CCDC192P0DO97 292 aa16.88■□□□□ 0.29
TPM3P9-201ENST00000424846 KRT85P78386 507 aa16.88■□□□□ 0.29
TPM3P9-201ENST00000424846 PDIA6Q15084 440 aa16.88■□□□□ 0.29
TPM3P9-201ENST00000424846 NRBP1Q9UHY1 535 aa16.88■□□□□ 0.29
TPM3P9-201ENST00000424846 LRMPQ12912 555 aa16.88■□□□□ 0.29
TPM3P9-201ENST00000424846 G3BP1Q13283 466 aaKnown RBP eCLIP16.88■□□□□ 0.29
TPM3P9-201ENST00000424846 BLOC1S2Q6QNY1 142 aa16.88■□□□□ 0.29
TPM3P9-201ENST00000424846 NUP62CLQ9H1M0 184 aa16.88■□□□□ 0.29
TPM3P9-201ENST00000424846 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.87■□□□□ 0.29
TPM3P9-201ENST00000424846 RPS6KB1P23443 525 aa16.87■□□□□ 0.29
TPM3P9-201ENST00000424846 CCDC129Q6ZRS4 1044 aa16.87■□□□□ 0.29
TPM3P9-201ENST00000424846 USP54Q70EL1 1684 aa16.87■□□□□ 0.29
TPM3P9-201ENST00000424846 MYL6BP14649 208 aa16.87■□□□□ 0.29
TPM3P9-201ENST00000424846 PLEKHO1Q53GL0 409 aaPredicted RBP16.87■□□□□ 0.29
TPM3P9-201ENST00000424846 ESCO1Q5FWF5 840 aa16.87■□□□□ 0.29
TPM3P9-201ENST00000424846 ERC1Q8IUD2 1116 aa16.87■□□□□ 0.29
TPM3P9-201ENST00000424846 LINS1Q8NG48 757 aa16.87■□□□□ 0.29
TPM3P9-201ENST00000424846 PRIMPOLQ96LW4 560 aa16.87■□□□□ 0.29
TPM3P9-201ENST00000424846 SEC62Q99442 399 aaKnown RBP16.87■□□□□ 0.29
TPM3P9-201ENST00000424846 LMO7Q8WWI1 1683 aa16.87■□□□□ 0.29
TPM3P9-201ENST00000424846 MAP3K11Q16584 847 aa16.86■□□□□ 0.29
TPM3P9-201ENST00000424846 ANO6Q4KMQ2 910 aa16.86■□□□□ 0.29
TPM3P9-201ENST00000424846 THEMISQ8N1K5 641 aaPredicted RBP16.86■□□□□ 0.29
TPM3P9-201ENST00000424846 PGBD1Q96JS3 809 aa16.86■□□□□ 0.29
TPM3P9-201ENST00000424846 LRRC2Q9BYS8 371 aa16.86■□□□□ 0.29
TPM3P9-201ENST00000424846 AXIN2Q9Y2T1 843 aa16.86■□□□□ 0.29
TPM3P9-201ENST00000424846 MED23Q9ULK4 1368 aa16.86■□□□□ 0.29
TPM3P9-201ENST00000424846 NR1I2O75469 434 aa16.86■□□□□ 0.29
TPM3P9-201ENST00000424846 HMGN5P82970 282 aaKnown RBP16.86■□□□□ 0.29
TPM3P9-201ENST00000424846 PSME1Q06323 249 aa16.86■□□□□ 0.29
TPM3P9-201ENST00000424846 SLFNL1Q499Z3 407 aa16.86■□□□□ 0.29
TPM3P9-201ENST00000424846 BCL2L12Q9HB09 334 aa16.86■□□□□ 0.29
TPM3P9-201ENST00000424846 CBX8Q9HC52 389 aa16.86■□□□□ 0.29
TPM3P9-201ENST00000424846 HEG1Q9ULI3 1381 aa16.86■□□□□ 0.29
TPM3P9-201ENST00000424846 C1orf141Q5JVX7 400 aa16.86■□□□□ 0.29
TPM3P9-201ENST00000424846 FAM200AQ8TCP9 573 aa16.86■□□□□ 0.29
TPM3P9-201ENST00000424846 LEO1Q8WVC0 666 aaPredicted RBP16.86■□□□□ 0.29
TPM3P9-201ENST00000424846 PRDM4Q9UKN5 801 aa16.86■□□□□ 0.29
TPM3P9-201ENST00000424846 RIOK3O14730 519 aaKnown RBP16.85■□□□□ 0.29
TPM3P9-201ENST00000424846 PPFIA3O75145 1194 aa16.85■□□□□ 0.29
TPM3P9-201ENST00000424846 GTF2F1P35269 517 aaKnown RBP eCLIP16.85■□□□□ 0.29
TPM3P9-201ENST00000424846 FOSBP53539 338 aa16.85■□□□□ 0.29
TPM3P9-201ENST00000424846 SPATA32Q96LK8 384 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms