RNA–Protein interactions for RNA: ENST00000424833.5

SCN2A-204, Transcript of sodium voltage-gated channel alpha subunit 2, humanhuman

TSL 1 (best)

Gene SCN2A, Length 1,807 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN2A-204ENST00000424833 HDAC5Q9UQL6 1122 aa10.1□□□□□ -0.79
SCN2A-204ENST00000424833 LTBP4Q8N2S1 1624 aa10.1□□□□□ -0.79
SCN2A-204ENST00000424833 GLRX3O76003 335 aaKnown RBP10.1□□□□□ -0.79
SCN2A-204ENST00000424833 AACSQ86V21 672 aa10.1□□□□□ -0.79
SCN2A-204ENST00000424833 SIL1Q9H173 461 aa10.1□□□□□ -0.79
SCN2A-204ENST00000424833 EVA1CP58658 441 aa10.09□□□□□ -0.79
SCN2A-204ENST00000424833 LSG1Q9H089 658 aaKnown RBP10.09□□□□□ -0.79
SCN2A-204ENST00000424833 RAD50Q92878 1312 aa10.08□□□□□ -0.8
SCN2A-204ENST00000424833 SSFA2P28290 1259 aa10.08□□□□□ -0.8
SCN2A-204ENST00000424833 HSPA4P34932 840 aa10.08□□□□□ -0.8
SCN2A-204ENST00000424833 ANAPC15P60006 121 aa10.08□□□□□ -0.8
SCN2A-204ENST00000424833 FOXO4P98177 505 aa10.08□□□□□ -0.8
SCN2A-204ENST00000424833 PTPN12Q05209 780 aaKnown RBP10.08□□□□□ -0.8
SCN2A-204ENST00000424833 CNTROBQ8N137 903 aa10.08□□□□□ -0.8
SCN2A-204ENST00000424833 ZGPATQ8N5A5 531 aaKnown RBP10.08□□□□□ -0.8
SCN2A-204ENST00000424833 COPRSQ9NQ92 184 aa10.08□□□□□ -0.8
SCN2A-204ENST00000424833 LRP6O75581 1613 aa10.08□□□□□ -0.8
SCN2A-204ENST00000424833 A0A087WZG4 1122 aa10.07□□□□□ -0.8
SCN2A-204ENST00000424833 H7C1W4 665 aa10.07□□□□□ -0.8
SCN2A-204ENST00000424833 EPB41L2O43491 1005 aaKnown RBP10.07□□□□□ -0.8
SCN2A-204ENST00000424833 ST18O60284 1047 aa10.07□□□□□ -0.8
SCN2A-204ENST00000424833 CYP2E1P05181 493 aaPredicted RBP10.07□□□□□ -0.8
SCN2A-204ENST00000424833 IFIT2P09913 472 aaKnown RBP10.07□□□□□ -0.8
SCN2A-204ENST00000424833 NEK4P51957 841 aa10.07□□□□□ -0.8
SCN2A-204ENST00000424833 PKP1Q13835 747 aa10.07□□□□□ -0.8
SCN2A-204ENST00000424833 PIGBQ92521 554 aa10.07□□□□□ -0.8
SCN2A-204ENST00000424833 CCDC8Q9H0W5 538 aaPredicted RBP10.07□□□□□ -0.8
SCN2A-204ENST00000424833 ASAP1Q9ULH1 1129 aa10.07□□□□□ -0.8
SCN2A-204ENST00000424833 NRAPQ86VF7 1730 aa10.07□□□□□ -0.8
SCN2A-204ENST00000424833 IGSF3O75054 1194 aa10.07□□□□□ -0.8
SCN2A-204ENST00000424833 HSP90AA1P07900 732 aaKnown RBP10.07□□□□□ -0.8
SCN2A-204ENST00000424833 G3BP1Q13283 466 aaKnown RBP eCLIP10.07□□□□□ -0.8
SCN2A-204ENST00000424833 CWC27Q6UX04 472 aaKnown RBP10.07□□□□□ -0.8
SCN2A-204ENST00000424833 CLEC17AQ6ZS10 378 aa10.07□□□□□ -0.8
SCN2A-204ENST00000424833 ATG3Q9NT62 314 aa10.07□□□□□ -0.8
SCN2A-204ENST00000424833 TMX3Q96JJ7 454 aa10.06□□□□□ -0.8
SCN2A-204ENST00000424833 UPF3BQ9BZI7 483 aaKnown RBP10.06□□□□□ -0.8
SCN2A-204ENST00000424833 ZBTB3Q9H5J0 574 aa10.06□□□□□ -0.8
SCN2A-204ENST00000424833 TMOD3Q9NYL9 352 aa10.06□□□□□ -0.8
SCN2A-204ENST00000424833 DBNLQ9UJU6 430 aaKnown RBP10.06□□□□□ -0.8
SCN2A-204ENST00000424833 BCL9O00512 1426 aa10.06□□□□□ -0.8
SCN2A-204ENST00000424833 DOT1LQ8TEK3 1739 aa10.05□□□□□ -0.8
SCN2A-204ENST00000424833 TFCP2Q12800 502 aa10.05□□□□□ -0.8
SCN2A-204ENST00000424833 DNAJC10Q8IXB1 793 aa10.05□□□□□ -0.8
SCN2A-204ENST00000424833 RASEFQ8IZ41 740 aa10.05□□□□□ -0.8
SCN2A-204ENST00000424833 GPATCH3Q96I76 525 aa10.05□□□□□ -0.8
SCN2A-204ENST00000424833 SLC4A9Q96Q91 983 aa10.05□□□□□ -0.8
SCN2A-204ENST00000424833 SNX14Q9Y5W7 946 aa10.05□□□□□ -0.8
SCN2A-204ENST00000424833 TRAK2O60296 914 aa10.05□□□□□ -0.8
SCN2A-204ENST00000424833 MCCP23508 829 aa10.05□□□□□ -0.8
SCN2A-204ENST00000424833 PTH1RQ03431 593 aa10.05□□□□□ -0.8
SCN2A-204ENST00000424833 CUL4AQ13619 759 aa10.05□□□□□ -0.8
SCN2A-204ENST00000424833 LMBR1LQ6UX01 489 aa10.05□□□□□ -0.8
SCN2A-204ENST00000424833 EVI5LQ96CN4 794 aa10.05□□□□□ -0.8
SCN2A-204ENST00000424833 CWC25Q9NXE8 425 aaPredicted RBP10.05□□□□□ -0.8
SCN2A-204ENST00000424833 ZDHHC9Q9Y397 364 aa10.05□□□□□ -0.8
SCN2A-204ENST00000424833 DCAF8L1A6NGE4 600 aa10.04□□□□□ -0.8
SCN2A-204ENST00000424833 DDX11L8A8MPP1 907 aa10.04□□□□□ -0.8
SCN2A-204ENST00000424833 TNNI3KQ59H18 835 aa10.04□□□□□ -0.8
SCN2A-204ENST00000424833 ATG9AQ7Z3C6 839 aa10.04□□□□□ -0.8
SCN2A-204ENST00000424833 FAM227BQ96M60 508 aa10.04□□□□□ -0.8
SCN2A-204ENST00000424833 TTC14Q96N46 770 aa10.04□□□□□ -0.8
SCN2A-204ENST00000424833 ISCA1Q9BUE6 129 aa10.04□□□□□ -0.8
SCN2A-204ENST00000424833 SNRKQ9NRH2 765 aa10.04□□□□□ -0.8
SCN2A-204ENST00000424833 FPGT-TNNI3KV9GXZ4 949 aa10.04□□□□□ -0.8
SCN2A-204ENST00000424833 A0A0D9SFI3 127 aa10.03□□□□□ -0.8
SCN2A-204ENST00000424833 NMIQ13287 307 aaPredicted RBP10.03□□□□□ -0.8
SCN2A-204ENST00000424833 EDC3Q96F86 508 aaKnown RBP10.03□□□□□ -0.8
SCN2A-204ENST00000424833 BOLA2Q9H3K6 86 aa10.03□□□□□ -0.8
SCN2A-204ENST00000424833 DIAPH3Q9NSV4 1193 aa10.03□□□□□ -0.8
SCN2A-204ENST00000424833 JCADQ9P266 1359 aa10.03□□□□□ -0.8
SCN2A-204ENST00000424833 MED23Q9ULK4 1368 aa10.03□□□□□ -0.8
SCN2A-204ENST00000424833 PHLPP1O60346 1717 aa10.03□□□□□ -0.8
SCN2A-204ENST00000424833 COL9A3Q14050 684 aaPredicted RBP10.03□□□□□ -0.8
SCN2A-204ENST00000424833 CCDC191Q8NCU4 936 aa10.03□□□□□ -0.8
SCN2A-204ENST00000424833 KCNB2Q92953 911 aa10.03□□□□□ -0.8
SCN2A-204ENST00000424833 NDUFB9Q9Y6M9 179 aa10.03□□□□□ -0.8
SCN2A-204ENST00000424833 ANKRD36CQ5JPF3 1778 aa10.02□□□□□ -0.81
SCN2A-204ENST00000424833 BAG4O95429 457 aaKnown RBP10.02□□□□□ -0.81
SCN2A-204ENST00000424833 CHGBP05060 677 aa10.02□□□□□ -0.81
SCN2A-204ENST00000424833 ATP5JP18859 108 aa10.02□□□□□ -0.81
SCN2A-204ENST00000424833 NOL8Q76FK4 1167 aaKnown RBP10.02□□□□□ -0.81
SCN2A-204ENST00000424833 GBP4Q96PP9 640 aa10.02□□□□□ -0.81
SCN2A-204ENST00000424833 DBNDD2Q9BQY9 259 aa10.02□□□□□ -0.81
SCN2A-204ENST00000424833 GZF1Q9H116 711 aaPredicted RBP10.02□□□□□ -0.81
SCN2A-204ENST00000424833 CWC22Q9HCG8 908 aaKnown RBP10.02□□□□□ -0.81
SCN2A-204ENST00000424833 CCDC171Q6TFL3 1326 aa10.02□□□□□ -0.81
SCN2A-204ENST00000424833 ZNF609O15014 1411 aa10.01□□□□□ -0.81
SCN2A-204ENST00000424833 SLIT2O94813 1529 aa10.01□□□□□ -0.81
SCN2A-204ENST00000424833 FSD2A1L4K1 749 aa10.01□□□□□ -0.81
SCN2A-204ENST00000424833 HSP90B1P14625 803 aaKnown RBP10.01□□□□□ -0.81
SCN2A-204ENST00000424833 MCM2P49736 904 aa10.01□□□□□ -0.81
SCN2A-204ENST00000424833 TCIRG1Q13488 830 aa10.01□□□□□ -0.81
SCN2A-204ENST00000424833 NECTIN1Q15223 517 aa10.01□□□□□ -0.81
SCN2A-204ENST00000424833 ADCK5Q3MIX3 580 aa10.01□□□□□ -0.81
SCN2A-204ENST00000424833 CHAMP1Q96JM3 812 aa10.01□□□□□ -0.81
SCN2A-204ENST00000424833 HMGB1P09429 215 aaKnown RBP10□□□□□ -0.81
SCN2A-204ENST00000424833 CYP19A1P11511 503 aaPredicted RBP10□□□□□ -0.81
SCN2A-204ENST00000424833 CPA1P15085 419 aa10□□□□□ -0.81
SCN2A-204ENST00000424833 NUCB2P80303 420 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms