RNA–Protein interactions for RNA: ENST00000424721.5

VPS8-205, Transcript of VPS8, CORVET complex subunit, humanhuman

TSL 3

Gene VPS8, Length 653 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS8-205ENST00000424721 DDX54Q8TDD1 881 aaKnown RBP7.43□□□□□ -1.22
VPS8-205ENST00000424721 SLC6A16Q9GZN6 736 aa7.43□□□□□ -1.22
VPS8-205ENST00000424721 PRDM9Q9NQV7 894 aa7.43□□□□□ -1.22
VPS8-205ENST00000424721 TONSLQ96HA7 1378 aa7.43□□□□□ -1.22
VPS8-205ENST00000424721 SBNO2Q9Y2G9 1366 aa7.43□□□□□ -1.22
VPS8-205ENST00000424721 PPP1R18Q6NYC8 613 aa7.42□□□□□ -1.22
VPS8-205ENST00000424721 NME9Q86XW9 330 aa7.42□□□□□ -1.22
VPS8-205ENST00000424721 ACSBG1Q96GR2 724 aa7.42□□□□□ -1.22
VPS8-205ENST00000424721 SLIT3O75094 1523 aa7.42□□□□□ -1.22
VPS8-205ENST00000424721 NRKQ7Z2Y5 1582 aa7.42□□□□□ -1.22
VPS8-205ENST00000424721 CRYBG1Q9Y4K1 1723 aa7.41□□□□□ -1.22
VPS8-205ENST00000424721 TMF1P82094 1093 aa7.41□□□□□ -1.22
VPS8-205ENST00000424721 MCM6Q14566 821 aa7.41□□□□□ -1.22
VPS8-205ENST00000424721 MSS51Q4VC12 460 aa7.41□□□□□ -1.22
VPS8-205ENST00000424721 ZCRB1Q8TBF4 217 aaKnown RBP7.41□□□□□ -1.22
VPS8-205ENST00000424721 SYT17Q9BSW7 474 aa7.41□□□□□ -1.22
VPS8-205ENST00000424721 TFCP2L1Q9NZI6 479 aa7.41□□□□□ -1.22
VPS8-205ENST00000424721 CGNL1Q0VF96 1302 aa7.41□□□□□ -1.22
VPS8-205ENST00000424721 TOPAZ1Q8N9V7 1692 aa7.41□□□□□ -1.22
VPS8-205ENST00000424721 LMO7Q8WWI1 1683 aa7.41□□□□□ -1.22
VPS8-205ENST00000424721 PPEF1O14829 653 aaPredicted RBP7.4□□□□□ -1.22
VPS8-205ENST00000424721 AP1G2O75843 785 aa7.4□□□□□ -1.22
VPS8-205ENST00000424721 GPR162Q16538 588 aa7.4□□□□□ -1.22
VPS8-205ENST00000424721 RTL5Q5HYW3 569 aaPredicted RBP7.4□□□□□ -1.22
VPS8-205ENST00000424721 PRR7Q8TB68 274 aa7.4□□□□□ -1.22
VPS8-205ENST00000424721 RAPGEF4Q8WZA2 1011 aa7.4□□□□□ -1.22
VPS8-205ENST00000424721 TSC1Q92574 1164 aa7.4□□□□□ -1.22
VPS8-205ENST00000424721 SYTL4Q96C24 671 aaPredicted RBP7.4□□□□□ -1.22
VPS8-205ENST00000424721 LTV1Q96GA3 475 aaPredicted RBP7.4□□□□□ -1.22
VPS8-205ENST00000424721 EDC4Q6P2E9 1401 aaKnown RBP7.4□□□□□ -1.22
VPS8-205ENST00000424721 TRPM1Q7Z4N2 1603 aa7.4□□□□□ -1.22
VPS8-205ENST00000424721 PARP4Q9UKK3 1724 aaKnown RBP7.4□□□□□ -1.23
VPS8-205ENST00000424721 TNS1Q9HBL0 1735 aaKnown RBP7.39□□□□□ -1.23
VPS8-205ENST00000424721 ST20-MTHFSA0A0A6YYL1 179 aa7.39□□□□□ -1.23
VPS8-205ENST00000424721 CFAP99D6REC4 459 aa7.39□□□□□ -1.23
VPS8-205ENST00000424721 GGCXP38435 758 aa7.39□□□□□ -1.23
VPS8-205ENST00000424721 PTF1AQ7RTS3 328 aa7.39□□□□□ -1.23
VPS8-205ENST00000424721 FLAD1Q8NFF5 587 aa7.39□□□□□ -1.23
VPS8-205ENST00000424721 FHDC1Q9C0D6 1143 aaPredicted RBP7.39□□□□□ -1.23
VPS8-205ENST00000424721 EIF4ENIF1Q9NRA8 985 aaKnown RBP7.39□□□□□ -1.23
VPS8-205ENST00000424721 QRICH2Q9H0J4 1663 aa7.38□□□□□ -1.23
VPS8-205ENST00000424721 ABCC6O95255 1503 aa7.38□□□□□ -1.23
VPS8-205ENST00000424721 RNF223E7ERA6 249 aa7.38□□□□□ -1.23
VPS8-205ENST00000424721 GRIN3BO60391 1043 aa7.38□□□□□ -1.23
VPS8-205ENST00000424721 USP17L8P0C7I0 530 aa7.38□□□□□ -1.23
VPS8-205ENST00000424721 TATP17735 454 aaPredicted RBP7.38□□□□□ -1.23
VPS8-205ENST00000424721 DESI1Q6ICB0 168 aa7.38□□□□□ -1.23
VPS8-205ENST00000424721 JUNDP17535 347 aa7.37□□□□□ -1.23
VPS8-205ENST00000424721 HOXC9P31274 260 aa7.37□□□□□ -1.23
VPS8-205ENST00000424721 MMP16P51512 607 aa7.37□□□□□ -1.23
VPS8-205ENST00000424721 SMARCC1Q92922 1105 aaPredicted RBP7.37□□□□□ -1.23
VPS8-205ENST00000424721 PRM3Q9NNZ6 103 aa7.37□□□□□ -1.23
VPS8-205ENST00000424721 TNS2Q63HR2 1409 aa7.36□□□□□ -1.23
VPS8-205ENST00000424721 DXOO77932 396 aaKnown RBP7.36□□□□□ -1.23
VPS8-205ENST00000424721 PDGFDQ9GZP0 370 aaPredicted RBP7.36□□□□□ -1.23
VPS8-205ENST00000424721 CCNL1Q9UK58 526 aaPredicted RBP7.36□□□□□ -1.23
VPS8-205ENST00000424721 FCF1Q9Y324 198 aaKnown RBP7.36□□□□□ -1.23
VPS8-205ENST00000424721 SMG6Q86US8 1419 aaKnown RBP7.35□□□□□ -1.23
VPS8-205ENST00000424721 USP47Q96K76 1375 aa7.35□□□□□ -1.23
VPS8-205ENST00000424721 RREB1Q92766 1687 aa7.35□□□□□ -1.23
VPS8-205ENST00000424721 MAP3K19Q56UN5 1328 aa7.35□□□□□ -1.23
VPS8-205ENST00000424721 FYB1O15117 783 aa7.35□□□□□ -1.23
VPS8-205ENST00000424721 RAD21O60216 631 aa7.35□□□□□ -1.23
VPS8-205ENST00000424721 TRIM26Q12899 539 aaPredicted RBP7.35□□□□□ -1.23
VPS8-205ENST00000424721 ZNF784Q8NCA9 323 aaPredicted RBP7.35□□□□□ -1.23
VPS8-205ENST00000424721 TESK2Q96S53 571 aa7.35□□□□□ -1.23
VPS8-205ENST00000424721 PODXL2Q9NZ53 605 aa7.35□□□□□ -1.23
VPS8-205ENST00000424721 SPG7Q9UQ90 795 aa7.35□□□□□ -1.23
VPS8-205ENST00000424721 COL18A1P39060 1754 aa7.35□□□□□ -1.23
VPS8-205ENST00000424721 PIK3C2AO00443 1686 aa7.35□□□□□ -1.23
VPS8-205ENST00000424721 A0A1W2PP64 1363 aa7.34□□□□□ -1.23
VPS8-205ENST00000424721 ANKRD36BQ8N2N9 1353 aa7.34□□□□□ -1.23
VPS8-205ENST00000424721 RGPD3A6NKT7 1758 aaPredicted RBP7.34□□□□□ -1.23
VPS8-205ENST00000424721 RGPD4Q7Z3J3 1758 aa7.34□□□□□ -1.23
VPS8-205ENST00000424721 NBPF6Q5VWK0 638 aa7.34□□□□□ -1.23
VPS8-205ENST00000424721 CCDC24Q8N4L8 307 aa7.34□□□□□ -1.23
VPS8-205ENST00000424721 ANKLE1Q8NAG6 615 aa7.34□□□□□ -1.23
VPS8-205ENST00000424721 NBPF4Q96M43 638 aa7.34□□□□□ -1.23
VPS8-205ENST00000424721 LRRC4BQ9NT99 713 aa7.34□□□□□ -1.23
VPS8-205ENST00000424721 NUP188Q5SRE5 1749 aa7.34□□□□□ -1.23
VPS8-205ENST00000424721 KIF24Q5T7B8 1368 aa7.33□□□□□ -1.24
VPS8-205ENST00000424721 MAP3K5Q99683 1374 aa7.33□□□□□ -1.24
VPS8-205ENST00000424721 PCDH11XQ9BZA7 1347 aa7.33□□□□□ -1.24
VPS8-205ENST00000424721 PCDH11YQ9BZA8 1340 aa7.33□□□□□ -1.24
VPS8-205ENST00000424721 NFAT5O94916 1531 aa7.33□□□□□ -1.24
VPS8-205ENST00000424721 PEAK1Q9H792 1746 aa7.33□□□□□ -1.24
VPS8-205ENST00000424721 PTPRNQ16849 979 aa7.33□□□□□ -1.24
VPS8-205ENST00000424721 PLA2G2CQ5R387 149 aa7.33□□□□□ -1.24
VPS8-205ENST00000424721 MTMR14Q8NCE2 650 aa7.33□□□□□ -1.24
VPS8-205ENST00000424721 NUDT12Q9BQG2 462 aa7.33□□□□□ -1.24
VPS8-205ENST00000424721 GGNBP2Q9H3C7 697 aa7.33□□□□□ -1.24
VPS8-205ENST00000424721 CD2APQ9Y5K6 639 aa7.33□□□□□ -1.24
VPS8-205ENST00000424721 RTL1A6NKG5 1358 aa7.33□□□□□ -1.24
VPS8-205ENST00000424721 KAT6BQ8WYB5 2073 aa7.32□□□□□ -1.24
VPS8-205ENST00000424721 SBF2Q86WG5 1849 aa7.32□□□□□ -1.24
VPS8-205ENST00000424721 LRRC37A3O60309 1634 aa7.32□□□□□ -1.24
VPS8-205ENST00000424721 PPM1GO15355 546 aaPredicted RBP7.32□□□□□ -1.24
VPS8-205ENST00000424721 PER1O15534 1290 aaPredicted RBP7.32□□□□□ -1.24
VPS8-205ENST00000424721 CTDSPL2Q05D32 466 aa7.32□□□□□ -1.24
VPS8-205ENST00000424721 RRS1Q15050 365 aaKnown RBP7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms