RNA–Protein interactions for RNA: ENST00000424254.6

FBXO28-202, Transcript of F-box protein 28, humanhuman

TSL 1 (best) BASIC

Gene FBXO28, Length 1,334 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FBXO28-202ENST00000424254 C3orf67Q6ZVT6 689 aa25.42■■□□□ 1.66
FBXO28-202ENST00000424254 PHAXQ9H814 394 aaKnown RBP25.42■■□□□ 1.66
FBXO28-202ENST00000424254 SLX4Q8IY92 1834 aa25.41■■□□□ 1.66
FBXO28-202ENST00000424254 SOGA3Q5TF21 947 aa25.39■■□□□ 1.66
FBXO28-202ENST00000424254 CCDC30Q5VVM6 783 aa25.39■■□□□ 1.66
FBXO28-202ENST00000424254 OLFM4Q6UX06 510 aa25.39■■□□□ 1.66
FBXO28-202ENST00000424254 WDR63Q8IWG1 891 aa25.39■■□□□ 1.66
FBXO28-202ENST00000424254 ZNF428Q96B54 188 aa25.39■■□□□ 1.66
FBXO28-202ENST00000424254 FANCIQ9NVI1 1328 aa25.39■■□□□ 1.66
FBXO28-202ENST00000424254 KIF3CO14782 793 aa25.38■■□□□ 1.65
FBXO28-202ENST00000424254 ALDH1B1P30837 517 aa25.38■■□□□ 1.65
FBXO28-202ENST00000424254 HOXA10P31260 410 aaPredicted RBP25.38■■□□□ 1.65
FBXO28-202ENST00000424254 SLC10A5Q5PT55 438 aa25.38■■□□□ 1.65
FBXO28-202ENST00000424254 SYNE4Q8N205 404 aa25.38■■□□□ 1.65
FBXO28-202ENST00000424254 RPGRQ92834 1020 aaKnown RBP25.38■■□□□ 1.65
FBXO28-202ENST00000424254 ISCA1Q9BUE6 129 aa25.38■■□□□ 1.65
FBXO28-202ENST00000424254 TAOK3Q9H2K8 898 aa25.38■■□□□ 1.65
FBXO28-202ENST00000424254 RNF123Q5XPI4 1314 aa25.38■■□□□ 1.65
FBXO28-202ENST00000424254 LTBP3Q9NS15 1303 aa25.38■■□□□ 1.65
FBXO28-202ENST00000424254 ATP5J2-PTCD1G3V325 749 aa25.37■■□□□ 1.65
FBXO28-202ENST00000424254 TWISTNBQ3B726 338 aaPredicted RBP25.37■■□□□ 1.65
FBXO28-202ENST00000424254 TRMT112Q9UI30 125 aaKnown RBP25.37■■□□□ 1.65
FBXO28-202ENST00000424254 GOLGA2Q08379 1002 aa25.37■■□□□ 1.65
FBXO28-202ENST00000424254 CCDC93Q567U6 631 aa25.37■■□□□ 1.65
FBXO28-202ENST00000424254 NLRP3Q96P20 1036 aa25.37■■□□□ 1.65
FBXO28-202ENST00000424254 NMRK2Q9NPI5 230 aa25.37■■□□□ 1.65
FBXO28-202ENST00000424254 TCERG1O14776 1098 aaKnown RBP25.36■■□□□ 1.65
FBXO28-202ENST00000424254 HCLS1P14317 486 aaPredicted RBP25.36■■□□□ 1.65
FBXO28-202ENST00000424254 RIC3Q7Z5B4 369 aa25.36■■□□□ 1.65
FBXO28-202ENST00000424254 CHMP4AQ9BY43 222 aa25.36■■□□□ 1.65
FBXO28-202ENST00000424254 SPINK5Q9NQ38 1064 aaPredicted RBP25.36■■□□□ 1.65
FBXO28-202ENST00000424254 SH3TC1Q8TE82 1336 aa25.35■■□□□ 1.65
FBXO28-202ENST00000424254 ZC3H4Q9UPT8 1303 aaKnown RBP25.35■■□□□ 1.65
FBXO28-202ENST00000424254 ARFGEF2Q9Y6D5 1785 aa25.35■■□□□ 1.65
FBXO28-202ENST00000424254 RBM17Q96I25 401 aaKnown RBP25.34■■□□□ 1.65
FBXO28-202ENST00000424254 CRAMP1Q96RY5 1269 aa25.34■■□□□ 1.65
FBXO28-202ENST00000424254 SBF1O95248 1867 aa25.33■■□□□ 1.65
FBXO28-202ENST00000424254 SLC51AQ86UW1 340 aa25.33■■□□□ 1.64
FBXO28-202ENST00000424254 ANKRD36CQ5JPF3 1778 aa25.33■■□□□ 1.64
FBXO28-202ENST00000424254 TRIM28Q13263 835 aaKnown RBP25.32■■□□□ 1.64
FBXO28-202ENST00000424254 KDM2BQ8NHM5 1336 aa25.32■■□□□ 1.64
FBXO28-202ENST00000424254 FER1L6Q2WGJ9 1857 aa25.31■■□□□ 1.64
FBXO28-202ENST00000424254 FKBP4Q02790 459 aaKnown RBP eCLIP25.31■■□□□ 1.64
FBXO28-202ENST00000424254 RTKN2Q8IZC4 609 aa25.31■■□□□ 1.64
FBXO28-202ENST00000424254 FAM89AQ96GI7 184 aa25.31■■□□□ 1.64
FBXO28-202ENST00000424254 STK31Q9BXU1 1019 aa25.31■■□□□ 1.64
FBXO28-202ENST00000424254 SNED1Q8TER0 1413 aa25.3■■□□□ 1.64
FBXO28-202ENST00000424254 EXOSC9Q06265 439 aaKnown RBP25.3■■□□□ 1.64
FBXO28-202ENST00000424254 MYD88Q99836 296 aa25.3■■□□□ 1.64
FBXO28-202ENST00000424254 CACNA1SQ13698 1873 aa25.3■■□□□ 1.64
FBXO28-202ENST00000424254 GLTPD2A6NH11 291 aa25.29■■□□□ 1.64
FBXO28-202ENST00000424254 PPEF1O14829 653 aaPredicted RBP25.29■■□□□ 1.64
FBXO28-202ENST00000424254 DDX58O95786 925 aaKnown RBP25.29■■□□□ 1.64
FBXO28-202ENST00000424254 ZNF277Q9NRM2 450 aaPredicted RBP25.29■■□□□ 1.64
FBXO28-202ENST00000424254 ABCC4O15439 1325 aa25.29■■□□□ 1.64
FBXO28-202ENST00000424254 ZNF521Q96K83 1311 aa25.29■■□□□ 1.64
FBXO28-202ENST00000424254 VAMP4O75379 141 aa25.28■■□□□ 1.64
FBXO28-202ENST00000424254 RTL5Q5HYW3 569 aaPredicted RBP25.28■■□□□ 1.64
FBXO28-202ENST00000424254 G2E3Q7L622 706 aa25.28■■□□□ 1.64
FBXO28-202ENST00000424254 METTL22Q9BUU2 404 aaPredicted RBP25.28■■□□□ 1.64
FBXO28-202ENST00000424254 SLC4A2P04920 1241 aa25.27■■□□□ 1.64
FBXO28-202ENST00000424254 RRAGCQ9HB90 399 aa25.27■■□□□ 1.64
FBXO28-202ENST00000424254 MAP3K2Q9Y2U5 619 aa25.27■■□□□ 1.64
FBXO28-202ENST00000424254 PI4KAP2A4QPH2 592 aa25.26■■□□□ 1.63
FBXO28-202ENST00000424254 CC2D2BQ6DHV5 1058 aa25.26■■□□□ 1.63
FBXO28-202ENST00000424254 KSR2Q6VAB6 950 aa25.26■■□□□ 1.63
FBXO28-202ENST00000424254 PI4KAP1Q8N8J0 262 aa25.26■■□□□ 1.63
FBXO28-202ENST00000424254 MYH16Q9H6N6 1097 aa25.26■■□□□ 1.63
FBXO28-202ENST00000424254 PSMD1Q99460 953 aa25.25■■□□□ 1.63
FBXO28-202ENST00000424254 TIAM2Q8IVF5 1701 aa25.25■■□□□ 1.63
FBXO28-202ENST00000424254 CCER2I3L3R5 266 aa25.24■■□□□ 1.63
FBXO28-202ENST00000424254 IRS4O14654 1257 aaPredicted RBP25.24■■□□□ 1.63
FBXO28-202ENST00000424254 ZBTB38Q8NAP3 1195 aaPredicted RBP25.24■■□□□ 1.63
FBXO28-202ENST00000424254 CCDC191Q8NCU4 936 aa25.24■■□□□ 1.63
FBXO28-202ENST00000424254 TOMM70O94826 608 aa25.23■■□□□ 1.63
FBXO28-202ENST00000424254 DDX46Q7L014 1031 aaKnown RBP25.23■■□□□ 1.63
FBXO28-202ENST00000424254 ATP6V0A2Q9Y487 856 aa25.23■■□□□ 1.63
FBXO28-202ENST00000424254 IARSP41252 1262 aaKnown RBP25.22■■□□□ 1.63
FBXO28-202ENST00000424254 FLIIQ13045 1269 aa25.22■■□□□ 1.63
FBXO28-202ENST00000424254 GRAPQ13588 217 aa25.22■■□□□ 1.63
FBXO28-202ENST00000424254 SF3B3Q15393 1217 aaKnown RBP25.22■■□□□ 1.63
FBXO28-202ENST00000424254 DPY19L2Q6NUT2 758 aa25.22■■□□□ 1.63
FBXO28-202ENST00000424254 GRAPLQ8TC17 118 aaPredicted RBP25.22■■□□□ 1.63
FBXO28-202ENST00000424254 CWC25Q9NXE8 425 aaPredicted RBP25.22■■□□□ 1.63
FBXO28-202ENST00000424254 BBOX1O75936 387 aa25.21■■□□□ 1.63
FBXO28-202ENST00000424254 IGKV5-2P06315 115 aa25.21■■□□□ 1.63
FBXO28-202ENST00000424254 JARID2Q92833 1246 aaPredicted RBP25.21■■□□□ 1.63
FBXO28-202ENST00000424254 PCCAP05165 728 aaPredicted RBP25.2■■□□□ 1.62
FBXO28-202ENST00000424254 GRIPAP1Q4V328 841 aa25.2■■□□□ 1.62
FBXO28-202ENST00000424254 POTECB2RU33 542 aa25.19■■□□□ 1.62
FBXO28-202ENST00000424254 DDNO94850 711 aaPredicted RBP25.19■■□□□ 1.62
FBXO28-202ENST00000424254 SP8Q8IXZ3 490 aa25.18■■□□□ 1.62
FBXO28-202ENST00000424254 C16orf71Q8IYS4 520 aaPredicted RBP25.18■■□□□ 1.62
FBXO28-202ENST00000424254 LAMB2P55268 1798 aa25.18■■□□□ 1.62
FBXO28-202ENST00000424254 DDX60Q8IY21 1712 aaKnown RBP25.18■■□□□ 1.62
FBXO28-202ENST00000424254 ZNF541Q9H0D2 1346 aa25.18■■□□□ 1.62
FBXO28-202ENST00000424254 VEGFAP15692 232 aaPredicted RBP25.17■■□□□ 1.62
FBXO28-202ENST00000424254 NEXNQ0ZGT2 675 aa25.17■■□□□ 1.62
FBXO28-202ENST00000424254 FKBP5Q13451 457 aaPredicted RBP25.17■■□□□ 1.62
FBXO28-202ENST00000424254 CWF19L2Q2TBE0 894 aaKnown RBP25.17■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 174 ms