RNA–Protein interactions for RNA: ENST00000424089.5

POLR1A-204, Transcript of RNA polymerase I subunit A, humanhuman

TSL 3

Gene POLR1A, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR1A-204ENST00000424089 LNPKQ9C0E8 428 aa12.45□□□□□ -0.42
POLR1A-204ENST00000424089 C1orf115Q9H7X2 142 aa12.45□□□□□ -0.42
POLR1A-204ENST00000424089 HDAC5Q9UQL6 1122 aa12.45□□□□□ -0.42
POLR1A-204ENST00000424089 HEG1Q9ULI3 1381 aa12.44□□□□□ -0.42
POLR1A-204ENST00000424089 BECN1Q14457 450 aa12.44□□□□□ -0.42
POLR1A-204ENST00000424089 SLC4A10Q6U841 1118 aa12.44□□□□□ -0.42
POLR1A-204ENST00000424089 DCAF5Q96JK2 942 aa12.44□□□□□ -0.42
POLR1A-204ENST00000424089 TBC1D32Q96NH3 1257 aa12.44□□□□□ -0.42
POLR1A-204ENST00000424089 DBF4Q9UBU7 674 aaPredicted RBP12.44□□□□□ -0.42
POLR1A-204ENST00000424089 MEIS3Q99687 375 aa12.43□□□□□ -0.42
POLR1A-204ENST00000424089 PCDH10Q9P2E7 1040 aa12.43□□□□□ -0.42
POLR1A-204ENST00000424089 MYH14Q7Z406 1995 aaKnown RBP12.43□□□□□ -0.42
POLR1A-204ENST00000424089 ZC3H4Q9UPT8 1303 aaKnown RBP12.42□□□□□ -0.42
POLR1A-204ENST00000424089 KCNA3P22001 575 aa12.42□□□□□ -0.42
POLR1A-204ENST00000424089 CABP4P57796 275 aa12.42□□□□□ -0.42
POLR1A-204ENST00000424089 IBTKQ9P2D0 1353 aaPredicted RBP12.42□□□□□ -0.42
POLR1A-204ENST00000424089 ADAMTS7Q9UKP4 1686 aa12.42□□□□□ -0.42
POLR1A-204ENST00000424089 VIRMAQ69YN4 1812 aaKnown RBP12.41□□□□□ -0.42
POLR1A-204ENST00000424089 CACNA1FO60840 1977 aa12.41□□□□□ -0.42
POLR1A-204ENST00000424089 F6X3S4 739 aa12.41□□□□□ -0.42
POLR1A-204ENST00000424089 ATP8B2P98198 1209 aa12.41□□□□□ -0.42
POLR1A-204ENST00000424089 SLC4A9Q96Q91 983 aa12.41□□□□□ -0.42
POLR1A-204ENST00000424089 SRCIN1Q9C0H9 1055 aa12.41□□□□□ -0.42
POLR1A-204ENST00000424089 SLC52A2Q9HAB3 445 aa12.41□□□□□ -0.42
POLR1A-204ENST00000424089 HYPKQ9NX55 129 aa12.41□□□□□ -0.42
POLR1A-204ENST00000424089 KDM3BQ7LBC6 1761 aa12.41□□□□□ -0.42
POLR1A-204ENST00000424089 SEC24BO95487 1268 aa12.4□□□□□ -0.42
POLR1A-204ENST00000424089 USP42Q9H9J4 1324 aaKnown RBP12.39□□□□□ -0.43
POLR1A-204ENST00000424089 PTCD1O75127 700 aaKnown RBP12.39□□□□□ -0.43
POLR1A-204ENST00000424089 ALDH1L1O75891 902 aa12.39□□□□□ -0.43
POLR1A-204ENST00000424089 DDX58O95786 925 aaKnown RBP12.39□□□□□ -0.43
POLR1A-204ENST00000424089 UBTFL1P0CB47 393 aaPredicted RBP12.39□□□□□ -0.43
POLR1A-204ENST00000424089 VEGFAP15692 232 aaPredicted RBP12.39□□□□□ -0.43
POLR1A-204ENST00000424089 EIF2S2P20042 333 aaKnown RBP12.39□□□□□ -0.43
POLR1A-204ENST00000424089 CRKLP46109 303 aaKnown RBP12.39□□□□□ -0.43
POLR1A-204ENST00000424089 PLEKHM2Q8IWE5 1019 aa12.39□□□□□ -0.43
POLR1A-204ENST00000424089 DNAAF4Q8WXU2 420 aa12.39□□□□□ -0.43
POLR1A-204ENST00000424089 CCDC88AQ3V6T2 1871 aa12.38□□□□□ -0.43
POLR1A-204ENST00000424089 ZPR1O75312 459 aa12.38□□□□□ -0.43
POLR1A-204ENST00000424089 CHRNA5P30532 468 aa12.38□□□□□ -0.43
POLR1A-204ENST00000424089 ZNF790Q6PG37 636 aa12.38□□□□□ -0.43
POLR1A-204ENST00000424089 NECTIN2Q92692 538 aa12.38□□□□□ -0.43
POLR1A-204ENST00000424089 C22orf23Q9BZE7 217 aa12.38□□□□□ -0.43
POLR1A-204ENST00000424089 USP44Q9H0E7 712 aa12.38□□□□□ -0.43
POLR1A-204ENST00000424089 OSBPL3Q9H4L5 887 aa12.38□□□□□ -0.43
POLR1A-204ENST00000424089 PHAXQ9H814 394 aaKnown RBP12.38□□□□□ -0.43
POLR1A-204ENST00000424089 DDX21Q9NR30 783 aaKnown RBP eCLIP12.38□□□□□ -0.43
POLR1A-204ENST00000424089 CHPF2Q9P2E5 772 aa12.38□□□□□ -0.43
POLR1A-204ENST00000424089 SRP68Q9UHB9 627 aaKnown RBP12.38□□□□□ -0.43
POLR1A-204ENST00000424089 TIAM2Q8IVF5 1701 aa12.37□□□□□ -0.43
POLR1A-204ENST00000424089 GLTPD2A6NH11 291 aa12.37□□□□□ -0.43
POLR1A-204ENST00000424089 KCNQ3O43525 872 aa12.37□□□□□ -0.43
POLR1A-204ENST00000424089 RAB11FIP3O75154 756 aa12.37□□□□□ -0.43
POLR1A-204ENST00000424089 CDC45O75419 566 aa12.37□□□□□ -0.43
POLR1A-204ENST00000424089 LMNB1P20700 586 aa12.37□□□□□ -0.43
POLR1A-204ENST00000424089 RBM25P49756 843 aaKnown RBP12.37□□□□□ -0.43
POLR1A-204ENST00000424089 DDR1Q08345 913 aa12.37□□□□□ -0.43
POLR1A-204ENST00000424089 BEND3Q5T5X7 828 aa12.37□□□□□ -0.43
POLR1A-204ENST00000424089 TTC22Q5TAA0 569 aa12.37□□□□□ -0.43
POLR1A-204ENST00000424089 KSR2Q6VAB6 950 aa12.37□□□□□ -0.43
POLR1A-204ENST00000424089 TJP1Q07157 1748 aa12.37□□□□□ -0.43
POLR1A-204ENST00000424089 KDM6AO15550 1401 aaPredicted RBP12.37□□□□□ -0.43
POLR1A-204ENST00000424089 MRC1P22897 1456 aa12.36□□□□□ -0.43
POLR1A-204ENST00000424089 POLRMTO00411 1230 aaKnown RBP12.36□□□□□ -0.43
POLR1A-204ENST00000424089 RASSF7Q02833 373 aa12.36□□□□□ -0.43
POLR1A-204ENST00000424089 HSP90AB4PQ58FF6 505 aa12.36□□□□□ -0.43
POLR1A-204ENST00000424089 CASC1Q6TDU7 716 aa12.36□□□□□ -0.43
POLR1A-204ENST00000424089 SSH3Q8TE77 659 aa12.36□□□□□ -0.43
POLR1A-204ENST00000424089 AIDAQ96BJ3 306 aa12.36□□□□□ -0.43
POLR1A-204ENST00000424089 MKRN1Q9UHC7 482 aaKnown RBP12.36□□□□□ -0.43
POLR1A-204ENST00000424089 AFDNP55196 1824 aaKnown RBP12.36□□□□□ -0.43
POLR1A-204ENST00000424089 DLEC1Q9Y238 1755 aa12.35□□□□□ -0.43
POLR1A-204ENST00000424089 PI4KAP2A4QPH2 592 aa12.35□□□□□ -0.43
POLR1A-204ENST00000424089 FOXN1O15353 648 aa12.35□□□□□ -0.43
POLR1A-204ENST00000424089 SNRPA1P09661 255 aaKnown RBP12.35□□□□□ -0.43
POLR1A-204ENST00000424089 TTC5Q8N0Z6 440 aa12.35□□□□□ -0.43
POLR1A-204ENST00000424089 PI4KAP1Q8N8J0 262 aa12.35□□□□□ -0.43
POLR1A-204ENST00000424089 LRRCC1Q9C099 1032 aa12.35□□□□□ -0.43
POLR1A-204ENST00000424089 PRDM10Q9NQV6 1147 aa12.35□□□□□ -0.43
POLR1A-204ENST00000424089 SCN11AQ9UI33 1791 aa12.34□□□□□ -0.43
POLR1A-204ENST00000424089 TM4SF1P30408 202 aa12.34□□□□□ -0.43
POLR1A-204ENST00000424089 MFAP1P55081 439 aaKnown RBP12.34□□□□□ -0.43
POLR1A-204ENST00000424089 MTX1Q13505 466 aa12.34□□□□□ -0.43
POLR1A-204ENST00000424089 POLA2Q14181 598 aa12.34□□□□□ -0.43
POLR1A-204ENST00000424089 USPL1Q5W0Q7 1092 aa12.34□□□□□ -0.43
POLR1A-204ENST00000424089 DPY19L2Q6NUT2 758 aa12.34□□□□□ -0.43
POLR1A-204ENST00000424089 NFATC2IPQ8NCF5 419 aa12.34□□□□□ -0.43
POLR1A-204ENST00000424089 LINS1Q8NG48 757 aa12.34□□□□□ -0.43
POLR1A-204ENST00000424089 FMNL2Q96PY5 1086 aa12.34□□□□□ -0.43
POLR1A-204ENST00000424089 LRRFIP2Q9Y608 721 aaKnown RBP12.34□□□□□ -0.43
POLR1A-204ENST00000424089 AOX1Q06278 1338 aa12.34□□□□□ -0.43
POLR1A-204ENST00000424089 ERBB4Q15303 1308 aa12.34□□□□□ -0.43
POLR1A-204ENST00000424089 SIPA1L3O60292 1781 aaPredicted RBP12.33□□□□□ -0.44
POLR1A-204ENST00000424089 CTCFP49711 727 aaPredicted RBP12.33□□□□□ -0.44
POLR1A-204ENST00000424089 TBC1D9Q6ZT07 1266 aa12.33□□□□□ -0.44
POLR1A-204ENST00000424089 TTLL6Q8N841 843 aa12.33□□□□□ -0.44
POLR1A-204ENST00000424089 NRXN2Q9P2S2 1712 aa12.32□□□□□ -0.44
POLR1A-204ENST00000424089 STAP2Q9UGK3 403 aa12.32□□□□□ -0.44
POLR1A-204ENST00000424089 MAP3K2Q9Y2U5 619 aa12.32□□□□□ -0.44
POLR1A-204ENST00000424089 UTYO14607 1347 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 188.3 ms