RNA–Protein interactions for RNA: ENST00000423998.1

GTF3C2-204, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 5

Gene GTF3C2, Length 828 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-204ENST00000423998 HDAC5Q9UQL6 1122 aa17.52■□□□□ 0.4
GTF3C2-204ENST00000423998 KIF16BQ96L93 1317 aa17.51■□□□□ 0.39
GTF3C2-204ENST00000423998 BCORQ6W2J9 1755 aa17.51■□□□□ 0.39
GTF3C2-204ENST00000423998 SOGA3Q5TF21 947 aa17.51■□□□□ 0.39
GTF3C2-204ENST00000423998 TTLL6Q8N841 843 aa17.51■□□□□ 0.39
GTF3C2-204ENST00000423998 ZBTB38Q8NAP3 1195 aaPredicted RBP17.51■□□□□ 0.39
GTF3C2-204ENST00000423998 A0A0G2JLW4 131 aa17.5■□□□□ 0.39
GTF3C2-204ENST00000423998 NPR1P16066 1061 aa17.5■□□□□ 0.39
GTF3C2-204ENST00000423998 DPEP1P16444 411 aa17.5■□□□□ 0.39
GTF3C2-204ENST00000423998 STYK1Q6J9G0 422 aa17.5■□□□□ 0.39
GTF3C2-204ENST00000423998 PELP1Q8IZL8 1130 aaKnown RBP17.5■□□□□ 0.39
GTF3C2-204ENST00000423998 SSH1Q8WYL5 1049 aa17.5■□□□□ 0.39
GTF3C2-204ENST00000423998 ARHGAP45Q92619 1136 aa17.5■□□□□ 0.39
GTF3C2-204ENST00000423998 RPGRQ92834 1020 aaKnown RBP17.5■□□□□ 0.39
GTF3C2-204ENST00000423998 API5Q9BZZ5 524 aaKnown RBP17.5■□□□□ 0.39
GTF3C2-204ENST00000423998 KLRG2A4D1S0 409 aaPredicted RBP17.49■□□□□ 0.39
GTF3C2-204ENST00000423998 ATP5J2-PTCD1G3V325 749 aa17.49■□□□□ 0.39
GTF3C2-204ENST00000423998 NTSR2O95665 410 aa17.49■□□□□ 0.39
GTF3C2-204ENST00000423998 GRIPAP1Q4V328 841 aa17.49■□□□□ 0.39
GTF3C2-204ENST00000423998 MRPL50Q8N5N7 158 aaKnown RBP17.49■□□□□ 0.39
GTF3C2-204ENST00000423998 NLGN2Q8NFZ4 835 aa17.49■□□□□ 0.39
GTF3C2-204ENST00000423998 ZNF622Q969S3 477 aaKnown RBP eCLIP17.49■□□□□ 0.39
GTF3C2-204ENST00000423998 NUP98P52948 1817 aa17.49■□□□□ 0.39
GTF3C2-204ENST00000423998 UBN2Q6ZU65 1347 aa17.48■□□□□ 0.39
GTF3C2-204ENST00000423998 RIC1Q4ADV7 1423 aa17.48■□□□□ 0.39
GTF3C2-204ENST00000423998 PCCAP05165 728 aaPredicted RBP17.48■□□□□ 0.39
GTF3C2-204ENST00000423998 ERFEQ4G0M1 354 aa17.48■□□□□ 0.39
GTF3C2-204ENST00000423998 G2E3Q7L622 706 aa17.48■□□□□ 0.39
GTF3C2-204ENST00000423998 RBM17Q96I25 401 aaKnown RBP17.48■□□□□ 0.39
GTF3C2-204ENST00000423998 ALDH1L1O75891 902 aa17.47■□□□□ 0.39
GTF3C2-204ENST00000423998 SRGNP10124 158 aa17.47■□□□□ 0.39
GTF3C2-204ENST00000423998 MS4A1P11836 297 aa17.47■□□□□ 0.39
GTF3C2-204ENST00000423998 RARSP54136 660 aaKnown RBP17.47■□□□□ 0.39
GTF3C2-204ENST00000423998 SRCIN1Q9C0H9 1055 aa17.47■□□□□ 0.39
GTF3C2-204ENST00000423998 BCS1LQ9Y276 419 aa17.47■□□□□ 0.39
GTF3C2-204ENST00000423998 CC2D2BQ6DHV5 1058 aa17.46■□□□□ 0.39
GTF3C2-204ENST00000423998 NUTM1Q86Y26 1132 aa17.46■□□□□ 0.39
GTF3C2-204ENST00000423998 NRXN2Q9P2S2 1712 aa17.46■□□□□ 0.39
GTF3C2-204ENST00000423998 NEURL1BA8MQ27 555 aa17.45■□□□□ 0.38
GTF3C2-204ENST00000423998 IRS4O14654 1257 aaPredicted RBP17.45■□□□□ 0.38
GTF3C2-204ENST00000423998 CCT4P50991 539 aaKnown RBP17.45■□□□□ 0.38
GTF3C2-204ENST00000423998 SLC4A10Q6U841 1118 aa17.45■□□□□ 0.38
GTF3C2-204ENST00000423998 DDX46Q7L014 1031 aaKnown RBP17.45■□□□□ 0.38
GTF3C2-204ENST00000423998 TMC4Q7Z404 712 aa17.45■□□□□ 0.38
GTF3C2-204ENST00000423998 C9orf78Q9NZ63 289 aaPredicted RBP17.45■□□□□ 0.38
GTF3C2-204ENST00000423998 KIF13BQ9NQT8 1826 aa17.44■□□□□ 0.38
GTF3C2-204ENST00000423998 PXDNLA1KZ92 1463 aa17.44■□□□□ 0.38
GTF3C2-204ENST00000423998 ADCY9O60503 1353 aa17.44■□□□□ 0.38
GTF3C2-204ENST00000423998 BBOX1O75936 387 aa17.44■□□□□ 0.38
GTF3C2-204ENST00000423998 KCNA3P22001 575 aa17.44■□□□□ 0.38
GTF3C2-204ENST00000423998 CHRNA5P30532 468 aa17.44■□□□□ 0.38
GTF3C2-204ENST00000423998 HOXA10P31260 410 aaPredicted RBP17.44■□□□□ 0.38
GTF3C2-204ENST00000423998 GCKRQ14397 625 aa17.44■□□□□ 0.38
GTF3C2-204ENST00000423998 CRY2Q49AN0 593 aa17.44■□□□□ 0.38
GTF3C2-204ENST00000423998 FAM89AQ96GI7 184 aa17.44■□□□□ 0.38
GTF3C2-204ENST00000423998 CRAMP1Q96RY5 1269 aa17.44■□□□□ 0.38
GTF3C2-204ENST00000423998 CDHR2Q9BYE9 1310 aa17.44■□□□□ 0.38
GTF3C2-204ENST00000423998 PDE8AO60658 829 aa17.43■□□□□ 0.38
GTF3C2-204ENST00000423998 CCDC152Q4G0S7 254 aa17.43■□□□□ 0.38
GTF3C2-204ENST00000423998 NOB1Q9ULX3 412 aaKnown RBP17.43■□□□□ 0.38
GTF3C2-204ENST00000423998 AFDNP55196 1824 aaKnown RBP17.42■□□□□ 0.38
GTF3C2-204ENST00000423998 IGKV5-2P06315 115 aa17.42■□□□□ 0.38
GTF3C2-204ENST00000423998 SF3B3Q15393 1217 aaKnown RBP17.42■□□□□ 0.38
GTF3C2-204ENST00000423998 BEND3Q5T5X7 828 aa17.42■□□□□ 0.38
GTF3C2-204ENST00000423998 CCDC24Q8N4L8 307 aa17.42■□□□□ 0.38
GTF3C2-204ENST00000423998 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.42■□□□□ 0.38
GTF3C2-204ENST00000423998 BCL2L13Q9BXK5 485 aa17.42■□□□□ 0.38
GTF3C2-204ENST00000423998 H7C1W4 665 aa17.41■□□□□ 0.38
GTF3C2-204ENST00000423998 ZKSCAN2Q63HK3 967 aa17.41■□□□□ 0.38
GTF3C2-204ENST00000423998 RTKN2Q8IZC4 609 aa17.41■□□□□ 0.38
GTF3C2-204ENST00000423998 F6X3S4 739 aa17.4■□□□□ 0.38
GTF3C2-204ENST00000423998 HCLS1P14317 486 aaPredicted RBP17.4■□□□□ 0.38
GTF3C2-204ENST00000423998 CWF19L2Q2TBE0 894 aaKnown RBP17.4■□□□□ 0.38
GTF3C2-204ENST00000423998 FRAT1Q92837 279 aaPredicted RBP17.4■□□□□ 0.38
GTF3C2-204ENST00000423998 ANKRD36CQ5JPF3 1778 aa17.4■□□□□ 0.38
GTF3C2-204ENST00000423998 GRM8O00222 908 aa17.39■□□□□ 0.37
GTF3C2-204ENST00000423998 PRPF40BQ6NWY9 871 aaKnown RBP17.39■□□□□ 0.37
GTF3C2-204ENST00000423998 ATF7IPQ6VMQ6 1270 aa17.39■□□□□ 0.37
GTF3C2-204ENST00000423998 ARHGAP27Q6ZUM4 889 aa17.39■□□□□ 0.37
GTF3C2-204ENST00000423998 UBE3BQ7Z3V4 1068 aa17.39■□□□□ 0.37
GTF3C2-204ENST00000423998 CHMP4BQ9H444 224 aaKnown RBP17.39■□□□□ 0.37
GTF3C2-204ENST00000423998 ARFGEF2Q9Y6D5 1785 aa17.38■□□□□ 0.37
GTF3C2-204ENST00000423998 RTL5Q5HYW3 569 aaPredicted RBP17.38■□□□□ 0.37
GTF3C2-204ENST00000423998 CDC5LQ99459 802 aaKnown RBP17.38■□□□□ 0.37
GTF3C2-204ENST00000423998 PLA2G12BQ9BX93 195 aa17.38■□□□□ 0.37
GTF3C2-204ENST00000423998 CCDC93Q567U6 631 aa17.37■□□□□ 0.37
GTF3C2-204ENST00000423998 FTSJ3Q8IY81 847 aaKnown RBP17.37■□□□□ 0.37
GTF3C2-204ENST00000423998 YTHDC1Q96MU7 727 aaKnown RBP17.37■□□□□ 0.37
GTF3C2-204ENST00000423998 RCAN3Q9UKA8 241 aa17.37■□□□□ 0.37
GTF3C2-204ENST00000423998 ABCC12Q96J65 1359 aa17.37■□□□□ 0.37
GTF3C2-204ENST00000423998 YBX3P16989 372 aaKnown RBP eCLIP17.36■□□□□ 0.377e-9■□□□□ 8.1
GTF3C2-204ENST00000423998 GRAPQ13588 217 aa17.36■□□□□ 0.37
GTF3C2-204ENST00000423998 GRAPLQ8TC17 118 aaPredicted RBP17.36■□□□□ 0.37
GTF3C2-204ENST00000423998 C21orf2O43822 256 aa17.35■□□□□ 0.37
GTF3C2-204ENST00000423998 GNAI3P08754 354 aa17.35■□□□□ 0.37
GTF3C2-204ENST00000423998 CTSWP56202 376 aa17.35■□□□□ 0.37
GTF3C2-204ENST00000423998 SP8Q8IXZ3 490 aa17.35■□□□□ 0.37
GTF3C2-204ENST00000423998 SUPT20HQ8NEM7 779 aa17.35■□□□□ 0.37
GTF3C2-204ENST00000423998 PPEF1O14829 653 aaPredicted RBP17.34■□□□□ 0.37
GTF3C2-204ENST00000423998 BCAR3O75815 825 aa17.34■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms