RNA–Protein interactions for RNA: ENST00000423692.5

SRRT-201, Transcript of serrate, RNA effector molecule, humanhuman

TSL 5

Gene SRRT, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-201ENST00000423692 KRT24Q2M2I5 525 aa19.24■□□□□ 0.67
SRRT-201ENST00000423692 CC2D2BQ6DHV5 1058 aa19.24■□□□□ 0.67
SRRT-201ENST00000423692 COPS6Q7L5N1 327 aa19.24■□□□□ 0.67
SRRT-201ENST00000423692 CRAMP1Q96RY5 1269 aa19.24■□□□□ 0.67
SRRT-201ENST00000423692 PSMD1Q99460 953 aa19.24■□□□□ 0.67
SRRT-201ENST00000423692 ZNF277Q9NRM2 450 aaPredicted RBP19.24■□□□□ 0.67
SRRT-201ENST00000423692 RNF123Q5XPI4 1314 aa19.24■□□□□ 0.67
SRRT-201ENST00000423692 HSP90AB3PQ58FF7 597 aa19.23■□□□□ 0.67
SRRT-201ENST00000423692 XAGE3Q8WTP9 111 aa19.23■□□□□ 0.67
SRRT-201ENST00000423692 RPGRQ92834 1020 aaKnown RBP19.23■□□□□ 0.67
SRRT-201ENST00000423692 L3MBTL3Q96JM7 780 aaPredicted RBP19.23■□□□□ 0.67
SRRT-201ENST00000423692 CFAP44Q96MT7 982 aa19.23■□□□□ 0.67
SRRT-201ENST00000423692 GRIPAP1Q4V328 841 aa19.22■□□□□ 0.67
SRRT-201ENST00000423692 C3orf67Q6ZVT6 689 aa19.22■□□□□ 0.67
SRRT-201ENST00000423692 SYNE4Q8N205 404 aa19.22■□□□□ 0.67
SRRT-201ENST00000423692 NECTIN2Q92692 538 aa19.22■□□□□ 0.67
SRRT-201ENST00000423692 RBM17Q96I25 401 aaKnown RBP19.22■□□□□ 0.67
SRRT-201ENST00000423692 UTP14AQ9BVJ6 771 aaKnown RBP19.22■□□□□ 0.67
SRRT-201ENST00000423692 LAS1LQ9Y4W2 734 aaKnown RBP19.22■□□□□ 0.67
SRRT-201ENST00000423692 ZNF853P0CG23 659 aa19.21■□□□□ 0.67
SRRT-201ENST00000423692 IARSP41252 1262 aaKnown RBP19.21■□□□□ 0.67
SRRT-201ENST00000423692 HTRA3P83110 453 aa19.21■□□□□ 0.67
SRRT-201ENST00000423692 NLRP3Q96P20 1036 aa19.21■□□□□ 0.67
SRRT-201ENST00000423692 FZD9O00144 591 aa19.2■□□□□ 0.66
SRRT-201ENST00000423692 AIMP1Q12904 312 aaKnown RBP19.2■□□□□ 0.66
SRRT-201ENST00000423692 TCIRG1Q13488 830 aa19.2■□□□□ 0.66
SRRT-201ENST00000423692 NLRP10Q86W26 655 aa19.2■□□□□ 0.66
SRRT-201ENST00000423692 KLRG1Q96E93 195 aa19.2■□□□□ 0.66
SRRT-201ENST00000423692 CHPF2Q9P2E5 772 aa19.2■□□□□ 0.66
SRRT-201ENST00000423692 IQCA1LA6NCM1 817 aa19.19■□□□□ 0.66
SRRT-201ENST00000423692 HDGFL1Q5TGJ6 251 aa19.19■□□□□ 0.66
SRRT-201ENST00000423692 JMYQ8N9B5 988 aa19.19■□□□□ 0.66
SRRT-201ENST00000423692 ZNF541Q9H0D2 1346 aa19.19■□□□□ 0.66
SRRT-201ENST00000423692 APAF1O14727 1248 aa19.18■□□□□ 0.66
SRRT-201ENST00000423692 MBIPQ9NS73 344 aa19.18■□□□□ 0.66
SRRT-201ENST00000423692 DBF4Q9UBU7 674 aaPredicted RBP19.18■□□□□ 0.66
SRRT-201ENST00000423692 ANKRD36CQ5JPF3 1778 aa19.17■□□□□ 0.66
SRRT-201ENST00000423692 PPEF1O14829 653 aaPredicted RBP19.17■□□□□ 0.66
SRRT-201ENST00000423692 DUSP27Q5VZP5 1158 aa19.17■□□□□ 0.66
SRRT-201ENST00000423692 CHADLQ6NUI6 762 aa19.17■□□□□ 0.66
SRRT-201ENST00000423692 PLBD2Q8NHP8 589 aa19.17■□□□□ 0.66
SRRT-201ENST00000423692 TAF1DQ9H5J8 278 aaPredicted RBP19.17■□□□□ 0.66
SRRT-201ENST00000423692 IFT57Q9NWB7 429 aa19.17■□□□□ 0.66
SRRT-201ENST00000423692 CALD1Q05682 793 aaKnown RBP19.16■□□□□ 0.66
SRRT-201ENST00000423692 POTEIP0CG38 1075 aa19.15■□□□□ 0.66
SRRT-201ENST00000423692 POTEJP0CG39 1038 aa19.15■□□□□ 0.66
SRRT-201ENST00000423692 ANKRD13DQ6ZTN6 518 aa19.15■□□□□ 0.66
SRRT-201ENST00000423692 JDP2Q8WYK2 163 aa19.15■□□□□ 0.66
SRRT-201ENST00000423692 ISCA1Q9BUE6 129 aa19.15■□□□□ 0.66
SRRT-201ENST00000423692 HYPKQ9NX55 129 aa19.15■□□□□ 0.66
SRRT-201ENST00000423692 ATP6V0A2Q9Y487 856 aa19.15■□□□□ 0.66
SRRT-201ENST00000423692 SCN4AP35499 1836 aa19.15■□□□□ 0.66
SRRT-201ENST00000423692 ABCC4O15439 1325 aa19.15■□□□□ 0.66
SRRT-201ENST00000423692 COL4A5P29400 1685 aa19.14■□□□□ 0.66
SRRT-201ENST00000423692 GNAI1P63096 354 aa19.14■□□□□ 0.65
SRRT-201ENST00000423692 SLC51AQ86UW1 340 aa19.14■□□□□ 0.65
SRRT-201ENST00000423692 LDHDQ86WU2 507 aa19.14■□□□□ 0.65
SRRT-201ENST00000423692 GPC2Q8N158 579 aa19.14■□□□□ 0.65
SRRT-201ENST00000423692 TRMT112Q9UI30 125 aaKnown RBP19.14■□□□□ 0.65
SRRT-201ENST00000423692 SH3TC1Q8TE82 1336 aa19.14■□□□□ 0.65
SRRT-201ENST00000423692 BBOX1O75936 387 aa19.13■□□□□ 0.65
SRRT-201ENST00000423692 HCLS1P14317 486 aaPredicted RBP19.13■□□□□ 0.65
SRRT-201ENST00000423692 TRIM28Q13263 835 aaKnown RBP19.13■□□□□ 0.65
SRRT-201ENST00000423692 VPS33BQ9H267 617 aa19.13■□□□□ 0.65
SRRT-201ENST00000423692 RTFDC1Q9BY42 306 aaPredicted RBP19.12■□□□□ 0.65
SRRT-201ENST00000423692 HACL1Q9UJ83 578 aa19.12■□□□□ 0.65
SRRT-201ENST00000423692 TCERG1O14776 1098 aaKnown RBP19.11■□□□□ 0.65
SRRT-201ENST00000423692 ZEB1P37275 1124 aaPredicted RBP19.11■□□□□ 0.65
SRRT-201ENST00000423692 SP8Q8IXZ3 490 aa19.11■□□□□ 0.65
SRRT-201ENST00000423692 LARGE2Q8N3Y3 721 aa19.11■□□□□ 0.65
SRRT-201ENST00000423692 PASKQ96RG2 1323 aa19.1■□□□□ 0.65
SRRT-201ENST00000423692 EPHX2P34913 555 aa19.1■□□□□ 0.65
SRRT-201ENST00000423692 EIF6P56537 245 aaKnown RBP19.1■□□□□ 0.65
SRRT-201ENST00000423692 GRAPQ13588 217 aa19.1■□□□□ 0.65
SRRT-201ENST00000423692 CCDC184Q52MB2 194 aa19.1■□□□□ 0.65
SRRT-201ENST00000423692 IFFO2Q5TF58 517 aa19.1■□□□□ 0.65
SRRT-201ENST00000423692 DDX46Q7L014 1031 aaKnown RBP19.1■□□□□ 0.65
SRRT-201ENST00000423692 GRAPLQ8TC17 118 aaPredicted RBP19.1■□□□□ 0.65
SRRT-201ENST00000423692 TMX4Q9H1E5 349 aaPredicted RBP19.1■□□□□ 0.65
SRRT-201ENST00000423692 LAMB2P55268 1798 aa19.09■□□□□ 0.65
SRRT-201ENST00000423692 ADAMTSL1Q8N6G6 1762 aa19.09■□□□□ 0.65
SRRT-201ENST00000423692 PCNTO95613 3336 aa19.09■□□□□ 0.65
SRRT-201ENST00000423692 PNMA8AQ86V59 439 aaPredicted RBP19.09■□□□□ 0.65
SRRT-201ENST00000423692 CREBZFQ9NS37 354 aa19.09■□□□□ 0.65
SRRT-201ENST00000423692 ITGBL1O95965 494 aaPredicted RBP19.08■□□□□ 0.64
SRRT-201ENST00000423692 SF3B3Q15393 1217 aaKnown RBP19.08■□□□□ 0.64
SRRT-201ENST00000423692 CCDC27Q2M243 656 aa19.08■□□□□ 0.64
SRRT-201ENST00000423692 TMC4Q7Z404 712 aa19.08■□□□□ 0.64
SRRT-201ENST00000423692 C8orf58Q8NAV2 365 aa19.08■□□□□ 0.64
SRRT-201ENST00000423692 SUPT20HQ8NEM7 779 aa19.08■□□□□ 0.64
SRRT-201ENST00000423692 ATP5J2-PTCD1G3V325 749 aa19.07■□□□□ 0.64
SRRT-201ENST00000423692 PPIP5K2O43314 1243 aa19.07■□□□□ 0.64
SRRT-201ENST00000423692 NCBP3Q53F19 620 aaKnown RBP19.07■□□□□ 0.64
SRRT-201ENST00000423692 NIM1KQ8IY84 436 aa19.07■□□□□ 0.64
SRRT-201ENST00000423692 FAM89AQ96GI7 184 aa19.07■□□□□ 0.64
SRRT-201ENST00000423692 CHMP4AQ9BY43 222 aa19.07■□□□□ 0.64
SRRT-201ENST00000423692 PHAXQ9H814 394 aaKnown RBP19.07■□□□□ 0.64
SRRT-201ENST00000423692 ELL2O00472 640 aaPredicted RBP19.06■□□□□ 0.64
SRRT-201ENST00000423692 GOLGA2Q08379 1002 aa19.06■□□□□ 0.64
SRRT-201ENST00000423692 AOC3Q16853 763 aa19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms