RNA–Protein interactions for RNA: ENST00000423572.6

SCN5A-205, Transcript of sodium voltage-gated channel alpha subunit 5, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN5A, Length 8,362 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN5A-205ENST00000423572 MSANTD4Q8NCY6 345 aa12.73□□□□□ -0.37
SCN5A-205ENST00000423572 GINS2Q9Y248 185 aa12.73□□□□□ -0.37
SCN5A-205ENST00000423572 PRKG1Q13976 671 aa12.73□□□□□ -0.37
SCN5A-205ENST00000423572 DHX37Q8IY37 1157 aaKnown RBP12.73□□□□□ -0.37
SCN5A-205ENST00000423572 CSADQ9Y600 493 aa12.73□□□□□ -0.37
SCN5A-205ENST00000423572 CCDC66A2RUB6 948 aa12.73□□□□□ -0.37
SCN5A-205ENST00000423572 FAM193AP78312 1265 aa12.73□□□□□ -0.37
SCN5A-205ENST00000423572 BCS1LQ9Y276 419 aa12.73□□□□□ -0.37
SCN5A-205ENST00000423572 FAM177A1Q8N128 213 aaPredicted RBP12.73□□□□□ -0.37
SCN5A-205ENST00000423572 CCDC89Q8N998 374 aa12.73□□□□□ -0.37
SCN5A-205ENST00000423572 RNF34Q969K3 372 aa12.73□□□□□ -0.37
SCN5A-205ENST00000423572 PDE4AP27815 886 aa12.73□□□□□ -0.37
SCN5A-205ENST00000423572 C22orf23Q9BZE7 217 aa12.73□□□□□ -0.37
SCN5A-205ENST00000423572 CALM1P0DP23 149 aa12.72□□□□□ -0.37
SCN5A-205ENST00000423572 CALM2P0DP24 149 aa12.72□□□□□ -0.37
SCN5A-205ENST00000423572 CALM3P0DP25 149 aa12.72□□□□□ -0.37
SCN5A-205ENST00000423572 XPO5Q9HAV4 1204 aaKnown RBP eCLIP12.72□□□□□ -0.37
SCN5A-205ENST00000423572 GCOM1H8Y6P7 765 aaPredicted RBP12.72□□□□□ -0.37
SCN5A-205ENST00000423572 GNPATO15228 680 aa12.72□□□□□ -0.37
SCN5A-205ENST00000423572 MYZAPP0CAP1 466 aa12.72□□□□□ -0.37
SCN5A-205ENST00000423572 NSFL1CQ9UNZ2 370 aaKnown RBP12.72□□□□□ -0.37
SCN5A-205ENST00000423572 KRT85P78386 507 aa12.72□□□□□ -0.37
SCN5A-205ENST00000423572 ZCRB1Q8TBF4 217 aaKnown RBP12.72□□□□□ -0.37
SCN5A-205ENST00000423572 NOB1Q9ULX3 412 aaKnown RBP12.72□□□□□ -0.37
SCN5A-205ENST00000423572 GLRX3O76003 335 aaKnown RBP12.72□□□□□ -0.37
SCN5A-205ENST00000423572 CCDC172P0C7W6 258 aa12.72□□□□□ -0.37
SCN5A-205ENST00000423572 PLCG2P16885 1265 aa12.72□□□□□ -0.37
SCN5A-205ENST00000423572 TTC12Q9H892 705 aaPredicted RBP12.72□□□□□ -0.37
SCN5A-205ENST00000423572 FSD2A1L4K1 749 aa12.72□□□□□ -0.37
SCN5A-205ENST00000423572 IRX3P78415 501 aaPredicted RBP12.72□□□□□ -0.37
SCN5A-205ENST00000423572 TAF7Q15545 349 aaPredicted RBP12.72□□□□□ -0.37
SCN5A-205ENST00000423572 PANK1Q8TE04 598 aa12.72□□□□□ -0.37
SCN5A-205ENST00000423572 CEP135Q66GS9 1140 aa12.72□□□□□ -0.37
SCN5A-205ENST00000423572 LRRC27Q9C0I9 530 aa12.72□□□□□ -0.37
SCN5A-205ENST00000423572 BBXQ8WY36 941 aaPredicted RBP12.71□□□□□ -0.37
SCN5A-205ENST00000423572 CCDC40Q4G0X9 1142 aa12.71□□□□□ -0.37
SCN5A-205ENST00000423572 PDRG1Q9NUG6 133 aa12.71□□□□□ -0.37
SCN5A-205ENST00000423572 RNF187Q5TA31 235 aaPredicted RBP12.71□□□□□ -0.37
SCN5A-205ENST00000423572 KLHL10Q6JEL2 608 aa12.71□□□□□ -0.37
SCN5A-205ENST00000423572 LEKR1Q6ZMV7 388 aa12.71□□□□□ -0.37
SCN5A-205ENST00000423572 MFSD6Q6ZSS7 791 aa12.71□□□□□ -0.37
SCN5A-205ENST00000423572 CCDC148Q8NFR7 591 aa12.71□□□□□ -0.38
SCN5A-205ENST00000423572 JAKMIP1Q96N16 626 aaKnown RBP12.71□□□□□ -0.38
SCN5A-205ENST00000423572 KRT13P13646 458 aa12.71□□□□□ -0.38
SCN5A-205ENST00000423572 BCAR3O75815 825 aa12.7□□□□□ -0.38
SCN5A-205ENST00000423572 CUL4BQ13620 913 aa12.7□□□□□ -0.38
SCN5A-205ENST00000423572 TDRD12Q587J7 1177 aaKnown RBP12.7□□□□□ -0.38
SCN5A-205ENST00000423572 DCPSQ96C86 337 aaKnown RBP12.7□□□□□ -0.38
SCN5A-205ENST00000423572 ZBTB21Q9ULJ3 1066 aa12.7□□□□□ -0.38
SCN5A-205ENST00000423572 RPGRIP1LQ68CZ1 1315 aa12.7□□□□□ -0.38
SCN5A-205ENST00000423572 IFT140Q96RY7 1462 aa12.7□□□□□ -0.38
SCN5A-205ENST00000423572 ATAD2BQ9ULI0 1458 aa12.7□□□□□ -0.38
SCN5A-205ENST00000423572 RAB3GAP1Q15042 981 aa12.7□□□□□ -0.38
SCN5A-205ENST00000423572 SPATA24Q86W54 205 aa12.7□□□□□ -0.38
SCN5A-205ENST00000423572 TCP11L2Q8N4U5 519 aa12.7□□□□□ -0.38
SCN5A-205ENST00000423572 SUPT20HQ8NEM7 779 aa12.7□□□□□ -0.38
SCN5A-205ENST00000423572 GCC1Q96CN9 775 aa12.7□□□□□ -0.38
SCN5A-205ENST00000423572 ATP5J2-PTCD1G3V325 749 aa12.7□□□□□ -0.38
SCN5A-205ENST00000423572 IDEP14735 1019 aa12.7□□□□□ -0.38
SCN5A-205ENST00000423572 LUZP1Q86V48 1076 aa12.7□□□□□ -0.38
SCN5A-205ENST00000423572 FAM43AQ8N2R8 423 aa12.7□□□□□ -0.38
SCN5A-205ENST00000423572 ELMSAN1Q6PJG2 1045 aa12.69□□□□□ -0.38
SCN5A-205ENST00000423572 EFCAB5A4FU69 1503 aa12.69□□□□□ -0.38
SCN5A-205ENST00000423572 DAPK1P53355 1430 aa12.69□□□□□ -0.38
SCN5A-205ENST00000423572 SMTNL1A8MU46 457 aa12.69□□□□□ -0.38
SCN5A-205ENST00000423572 IFFO1Q0D2I5 559 aa12.69□□□□□ -0.38
SCN5A-205ENST00000423572 DDX11Q96FC9 970 aa12.69□□□□□ -0.38
SCN5A-205ENST00000423572 PALM3A6NDB9 673 aaPredicted RBP12.69□□□□□ -0.38
SCN5A-205ENST00000423572 CNBD1Q8NA66 436 aa12.69□□□□□ -0.38
SCN5A-205ENST00000423572 USP21Q9UK80 565 aa12.69□□□□□ -0.38
SCN5A-205ENST00000423572 CCDC192P0DO97 292 aa12.69□□□□□ -0.38
SCN5A-205ENST00000423572 BRD4O60885 1362 aaPredicted RBP12.69□□□□□ -0.38
SCN5A-205ENST00000423572 MIS18AQ9NYP9 233 aa12.69□□□□□ -0.38
SCN5A-205ENST00000423572 XRCC6P12956 609 aaKnown RBP eCLIP12.69□□□□□ -0.38
SCN5A-205ENST00000423572 PRKCSHP14314 528 aaPredicted RBP12.69□□□□□ -0.38
SCN5A-205ENST00000423572 NCOA2Q15596 1464 aa12.69□□□□□ -0.38
SCN5A-205ENST00000423572 PLVAPQ9BX97 442 aa12.68□□□□□ -0.38
SCN5A-205ENST00000423572 STK24Q9Y6E0 443 aa12.68□□□□□ -0.38
SCN5A-205ENST00000423572 PRPF4BQ13523 1007 aaKnown RBP12.68□□□□□ -0.38
SCN5A-205ENST00000423572 ZNF569Q5MCW4 686 aa12.68□□□□□ -0.38
SCN5A-205ENST00000423572 NASPP49321 788 aaPredicted RBP12.68□□□□□ -0.38
SCN5A-205ENST00000423572 ARHGEF10LQ9HCE6 1279 aa12.68□□□□□ -0.38
SCN5A-205ENST00000423572 CCNL1Q9UK58 526 aaPredicted RBP12.68□□□□□ -0.38
SCN5A-205ENST00000423572 ZNF644Q9H582 1327 aaPredicted RBP12.68□□□□□ -0.38
SCN5A-205ENST00000423572 ARHGAP29Q52LW3 1261 aa12.68□□□□□ -0.38
SCN5A-205ENST00000423572 FAM193BQ96PV7 902 aaPredicted RBP12.68□□□□□ -0.38
SCN5A-205ENST00000423572 BOLA2Q9H3K6 86 aa12.68□□□□□ -0.38
SCN5A-205ENST00000423572 EXOSC9Q06265 439 aaKnown RBP12.68□□□□□ -0.38
SCN5A-205ENST00000423572 WAPLQ7Z5K2 1190 aa12.67□□□□□ -0.38
SCN5A-205ENST00000423572 SLC12A5Q9H2X9 1139 aa12.67□□□□□ -0.38
SCN5A-205ENST00000423572 PRKRIP1Q9H875 184 aaPredicted RBP12.67□□□□□ -0.38
SCN5A-205ENST00000423572 HFM1A2PYH4 1435 aa12.67□□□□□ -0.38
SCN5A-205ENST00000423572 SULF1Q8IWU6 871 aa12.67□□□□□ -0.38
SCN5A-205ENST00000423572 ANKRD24Q8TF21 1146 aa12.67□□□□□ -0.38
SCN5A-205ENST00000423572 ERICH3Q5RHP9 1530 aa12.67□□□□□ -0.38
SCN5A-205ENST00000423572 GOLGA8AA7E2F4 631 aa12.67□□□□□ -0.38
SCN5A-205ENST00000423572 GOLGA8BA8MQT2 603 aa12.67□□□□□ -0.38
SCN5A-205ENST00000423572 TEX14Q8IWB6 1497 aa12.67□□□□□ -0.38
SCN5A-205ENST00000423572 TMEM67Q5HYA8 995 aa12.67□□□□□ -0.38
SCN5A-205ENST00000423572 KIF1BPQ96EK5 621 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms