RNA–Protein interactions for RNA: ENST00000423567.1

USP49-204, Transcript of ubiquitin specific peptidase 49, humanhuman

TSL 2

Gene USP49, Length 752 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP49-204ENST00000423567 MYH16Q9H6N6 1097 aa14.1□□□□□ -0.15
USP49-204ENST00000423567 GOLGA2Q08379 1002 aa14.09□□□□□ -0.15
USP49-204ENST00000423567 TWISTNBQ3B726 338 aaPredicted RBP14.09□□□□□ -0.15
USP49-204ENST00000423567 ANKRD13DQ6ZTN6 518 aa14.09□□□□□ -0.15
USP49-204ENST00000423567 PLBD2Q8NHP8 589 aa14.09□□□□□ -0.15
USP49-204ENST00000423567 CNKSR1Q969H4 720 aa14.09□□□□□ -0.15
USP49-204ENST00000423567 MASTLQ96GX5 879 aa14.09□□□□□ -0.15
USP49-204ENST00000423567 FANCIQ9NVI1 1328 aa14.09□□□□□ -0.15
USP49-204ENST00000423567 IBTKQ9P2D0 1353 aaPredicted RBP14.09□□□□□ -0.15
USP49-204ENST00000423567 TCIRG1Q13488 830 aa14.08□□□□□ -0.16
USP49-204ENST00000423567 STYK1Q6J9G0 422 aa14.08□□□□□ -0.16
USP49-204ENST00000423567 TSPYL6Q8N831 410 aa14.08□□□□□ -0.16
USP49-204ENST00000423567 UTP14AQ9BVJ6 771 aaKnown RBP14.08□□□□□ -0.16
USP49-204ENST00000423567 UBN2Q6ZU65 1347 aa14.08□□□□□ -0.16
USP49-204ENST00000423567 DDX58O95786 925 aaKnown RBP14.07□□□□□ -0.16
USP49-204ENST00000423567 SRGNP10124 158 aa14.07□□□□□ -0.16
USP49-204ENST00000423567 NPR1P16066 1061 aa14.07□□□□□ -0.16
USP49-204ENST00000423567 ERFEQ4G0M1 354 aa14.07□□□□□ -0.16
USP49-204ENST00000423567 SUSD4Q5VX71 490 aa14.07□□□□□ -0.16
USP49-204ENST00000423567 RIC3Q7Z5B4 369 aa14.07□□□□□ -0.16
USP49-204ENST00000423567 NUTM1Q86Y26 1132 aa14.07□□□□□ -0.16
USP49-204ENST00000423567 CHD4Q14839 1912 aa14.06□□□□□ -0.16
USP49-204ENST00000423567 NTSR2O95665 410 aa14.06□□□□□ -0.16
USP49-204ENST00000423567 ZNF784Q8NCA9 323 aaPredicted RBP14.06□□□□□ -0.16
USP49-204ENST00000423567 RNF123Q5XPI4 1314 aa14.06□□□□□ -0.16
USP49-204ENST00000423567 KLRG2A4D1S0 409 aaPredicted RBP14.05□□□□□ -0.16
USP49-204ENST00000423567 ALDH1B1P30837 517 aa14.05□□□□□ -0.16
USP49-204ENST00000423567 SOGA3Q5TF21 947 aa14.05□□□□□ -0.16
USP49-204ENST00000423567 NLRP10Q86W26 655 aa14.05□□□□□ -0.16
USP49-204ENST00000423567 RPGRQ92834 1020 aaKnown RBP14.05□□□□□ -0.16
USP49-204ENST00000423567 PHAXQ9H814 394 aaKnown RBP14.05□□□□□ -0.16
USP49-204ENST00000423567 TRMT112Q9UI30 125 aaKnown RBP14.05□□□□□ -0.16
USP49-204ENST00000423567 NUP98P52948 1817 aa14.04□□□□□ -0.16
USP49-204ENST00000423567 EXOSC9Q06265 439 aaKnown RBP14.04□□□□□ -0.16
USP49-204ENST00000423567 PRPF40BQ6NWY9 871 aaKnown RBP14.04□□□□□ -0.16
USP49-204ENST00000423567 NLRP3Q96P20 1036 aa14.04□□□□□ -0.16
USP49-204ENST00000423567 ABCC12Q96J65 1359 aa14.04□□□□□ -0.16
USP49-204ENST00000423567 BRCA1P38398 1863 aaKnown RBP14.04□□□□□ -0.16
USP49-204ENST00000423567 TCERG1O14776 1098 aaKnown RBP14.03□□□□□ -0.16
USP49-204ENST00000423567 C21orf2O43822 256 aa14.03□□□□□ -0.16
USP49-204ENST00000423567 SH3TC1Q8TE82 1336 aa14.03□□□□□ -0.16
USP49-204ENST00000423567 RIC1Q4ADV7 1423 aa14.03□□□□□ -0.16
USP49-204ENST00000423567 GOLGB1Q14789 3259 aaKnown RBP14.02□□□□□ -0.16
USP49-204ENST00000423567 ANKRD31Q8N7Z5 1873 aa14.02□□□□□ -0.16
USP49-204ENST00000423567 ATP5J2-PTCD1G3V325 749 aa14.02□□□□□ -0.17
USP49-204ENST00000423567 C9orf131Q5VYM1 1079 aa14.02□□□□□ -0.17
USP49-204ENST00000423567 RBM17Q96I25 401 aaKnown RBP14.02□□□□□ -0.17
USP49-204ENST00000423567 ISCA1Q9BUE6 129 aa14.02□□□□□ -0.17
USP49-204ENST00000423567 UTRNP46939 3433 aa14.02□□□□□ -0.17
USP49-204ENST00000423567 ARFGEF1Q9Y6D6 1849 aa14.01□□□□□ -0.17
USP49-204ENST00000423567 DLEC1Q9Y238 1755 aa14.01□□□□□ -0.17
USP49-204ENST00000423567 ZNF521Q96K83 1311 aa14.01□□□□□ -0.17
USP49-204ENST00000423567 E9PSI1 815 aa14.01□□□□□ -0.17
USP49-204ENST00000423567 VAMP4O75379 141 aa14.01□□□□□ -0.17
USP49-204ENST00000423567 PRR29P0C7W0 189 aa14.01□□□□□ -0.17
USP49-204ENST00000423567 HSP90B1P14625 803 aaKnown RBP14.01□□□□□ -0.17
USP49-204ENST00000423567 NEXNQ0ZGT2 675 aa14.01□□□□□ -0.17
USP49-204ENST00000423567 CRY2Q49AN0 593 aa14.01□□□□□ -0.17
USP49-204ENST00000423567 SLC10A5Q5PT55 438 aa14.01□□□□□ -0.17
USP49-204ENST00000423567 MIER1Q8N108 512 aa14.01□□□□□ -0.17
USP49-204ENST00000423567 MYD88Q99836 296 aa14.01□□□□□ -0.17
USP49-204ENST00000423567 RNF181Q9P0P0 153 aa14.01□□□□□ -0.17
USP49-204ENST00000423567 LMNB1P20700 586 aa14□□□□□ -0.17
USP49-204ENST00000423567 TRIM28Q13263 835 aaKnown RBP14□□□□□ -0.17
USP49-204ENST00000423567 CCDC93Q567U6 631 aa14□□□□□ -0.17
USP49-204ENST00000423567 KSR2Q6VAB6 950 aa14□□□□□ -0.17
USP49-204ENST00000423567 METTL22Q9BUU2 404 aaPredicted RBP14□□□□□ -0.17
USP49-204ENST00000423567 TMX4Q9H1E5 349 aaPredicted RBP14□□□□□ -0.17
USP49-204ENST00000423567 GPBP1L1Q9HC44 474 aaPredicted RBP14□□□□□ -0.17
USP49-204ENST00000423567 MAP3K2Q9Y2U5 619 aa14□□□□□ -0.17
USP49-204ENST00000423567 ADCY9O60503 1353 aa13.99□□□□□ -0.17
USP49-204ENST00000423567 COL11A2P13942 1736 aaPredicted RBP13.99□□□□□ -0.17
USP49-204ENST00000423567 PI4KAP2A4QPH2 592 aa13.99□□□□□ -0.17
USP49-204ENST00000423567 PRKAR2AP13861 404 aaKnown RBP13.99□□□□□ -0.17
USP49-204ENST00000423567 HCLS1P14317 486 aaPredicted RBP13.99□□□□□ -0.17
USP49-204ENST00000423567 HOXA10P31260 410 aaPredicted RBP13.99□□□□□ -0.17
USP49-204ENST00000423567 RASSF7Q02833 373 aa13.99□□□□□ -0.17
USP49-204ENST00000423567 FLIIQ13045 1269 aa13.99□□□□□ -0.17
USP49-204ENST00000423567 FKBP5Q13451 457 aaPredicted RBP13.99□□□□□ -0.17
USP49-204ENST00000423567 PI4KAP1Q8N8J0 262 aa13.99□□□□□ -0.17
USP49-204ENST00000423567 ZNF526Q8TF50 670 aaPredicted RBP13.99□□□□□ -0.17
USP49-204ENST00000423567 TAOK3Q9H2K8 898 aa13.99□□□□□ -0.17
USP49-204ENST00000423567 RTKN2Q8IZC4 609 aa13.98□□□□□ -0.17
USP49-204ENST00000423567 CCDC191Q8NCU4 936 aa13.98□□□□□ -0.17
USP49-204ENST00000423567 ZNF428Q96B54 188 aa13.98□□□□□ -0.17
USP49-204ENST00000423567 FAM89AQ96GI7 184 aa13.98□□□□□ -0.17
USP49-204ENST00000423567 CRAMP1Q96RY5 1269 aa13.98□□□□□ -0.17
USP49-204ENST00000423567 CWC25Q9NXE8 425 aaPredicted RBP13.98□□□□□ -0.17
USP49-204ENST00000423567 ANKRD36CQ5JPF3 1778 aa13.97□□□□□ -0.17
USP49-204ENST00000423567 NFKBIEO00221 500 aa13.97□□□□□ -0.17
USP49-204ENST00000423567 CC2D2BQ6DHV5 1058 aa13.97□□□□□ -0.17
USP49-204ENST00000423567 C3orf67Q6ZVT6 689 aa13.97□□□□□ -0.17
USP49-204ENST00000423567 DDX46Q7L014 1031 aaKnown RBP13.97□□□□□ -0.17
USP49-204ENST00000423567 ZBTB38Q8NAP3 1195 aaPredicted RBP13.97□□□□□ -0.17
USP49-204ENST00000423567 LTBP3Q9NS15 1303 aa13.96□□□□□ -0.17
USP49-204ENST00000423567 ZC3H4Q9UPT8 1303 aaKnown RBP13.96□□□□□ -0.17
USP49-204ENST00000423567 TNRC6CQ9HCJ0 1690 aaKnown RBP13.96□□□□□ -0.17
USP49-204ENST00000423567 IRS4O14654 1257 aaPredicted RBP13.96□□□□□ -0.17
USP49-204ENST00000423567 PPEF1O14829 653 aaPredicted RBP13.96□□□□□ -0.17
USP49-204ENST00000423567 SLFN5Q08AF3 891 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms