RNA–Protein interactions for RNA: ENST00000423485.5

TOP2A-201, Transcript of DNA topoisomerase II alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP2A, Length 5,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2A-201ENST00000423485 ZNF804AQ7Z570 1209 aa4.31□□□□□ -1.72
TOP2A-201ENST00000423485 SH2D4AQ9H788 454 aa4.31□□□□□ -1.72
TOP2A-201ENST00000423485 KMT5BQ4FZB7 885 aa4.31□□□□□ -1.72
TOP2A-201ENST00000423485 CDC37L1Q7L3B6 337 aa4.31□□□□□ -1.72
TOP2A-201ENST00000423485 AP5M1Q9H0R1 490 aa4.31□□□□□ -1.72
TOP2A-201ENST00000423485 TRIM17Q9Y577 477 aa4.31□□□□□ -1.72
TOP2A-201ENST00000423485 PPLO60437 1756 aa4.31□□□□□ -1.72
TOP2A-201ENST00000423485 RICTORQ6R327 1708 aa4.31□□□□□ -1.72
TOP2A-201ENST00000423485 MYO3AQ8NEV4 1616 aa4.31□□□□□ -1.72
TOP2A-201ENST00000423485 DAPK1P53355 1430 aa4.31□□□□□ -1.72
TOP2A-201ENST00000423485 VPS72Q15906 364 aa4.31□□□□□ -1.72
TOP2A-201ENST00000423485 UBE2Q2Q8WVN8 375 aa4.31□□□□□ -1.72
TOP2A-201ENST00000423485 ERICH2A1L162 156 aa4.3□□□□□ -1.72
TOP2A-201ENST00000423485 PRELPP51888 382 aa4.3□□□□□ -1.72
TOP2A-201ENST00000423485 FTSJ3Q8IY81 847 aaKnown RBP4.3□□□□□ -1.72
TOP2A-201ENST00000423485 CD2APQ9Y5K6 639 aa4.3□□□□□ -1.72
TOP2A-201ENST00000423485 HEMK1Q9Y5R4 338 aaPredicted RBP4.3□□□□□ -1.72
TOP2A-201ENST00000423485 BLMP54132 1417 aaPredicted RBP4.3□□□□□ -1.72
TOP2A-201ENST00000423485 PTPRMP28827 1452 aa4.3□□□□□ -1.72
TOP2A-201ENST00000423485 ZMYM4Q5VZL5 1548 aa4.3□□□□□ -1.72
TOP2A-201ENST00000423485 DLGAP5Q15398 846 aa4.3□□□□□ -1.72
TOP2A-201ENST00000423485 CIAPIN1Q6FI81 312 aa4.3□□□□□ -1.72
TOP2A-201ENST00000423485 GADL1Q6ZQY3 521 aa4.3□□□□□ -1.72
TOP2A-201ENST00000423485 UBE2OQ9C0C9 1292 aaKnown RBP4.3□□□□□ -1.72
TOP2A-201ENST00000423485 RUBCNLQ9H714 662 aa4.3□□□□□ -1.72
TOP2A-201ENST00000423485 ZBTB22O15209 634 aa4.3□□□□□ -1.72
TOP2A-201ENST00000423485 PRC1O43663 620 aa4.3□□□□□ -1.72
TOP2A-201ENST00000423485 PRIM1P49642 420 aaKnown RBP4.3□□□□□ -1.72
TOP2A-201ENST00000423485 FCGRTP55899 365 aa4.3□□□□□ -1.72
TOP2A-201ENST00000423485 NFE2L2Q16236 605 aa4.3□□□□□ -1.72
TOP2A-201ENST00000423485 APBB1IPQ7Z5R6 666 aaPredicted RBP4.3□□□□□ -1.72
TOP2A-201ENST00000423485 RDH13Q8NBN7 331 aa4.3□□□□□ -1.72
TOP2A-201ENST00000423485 PRAM1Q96QH2 718 aa4.3□□□□□ -1.72
TOP2A-201ENST00000423485 CEP89Q96ST8 783 aa4.3□□□□□ -1.72
TOP2A-201ENST00000423485 NEO1Q92859 1461 aa4.3□□□□□ -1.72
TOP2A-201ENST00000423485 LAMC1P11047 1609 aa4.3□□□□□ -1.72
TOP2A-201ENST00000423485 ADGRB3O60242 1522 aa4.3□□□□□ -1.72
TOP2A-201ENST00000423485 NPM3O75607 178 aaKnown RBP4.3□□□□□ -1.72
TOP2A-201ENST00000423485 SPTY2D1Q68D10 685 aaPredicted RBP4.3□□□□□ -1.72
TOP2A-201ENST00000423485 DHX37Q8IY37 1157 aaKnown RBP4.3□□□□□ -1.72
TOP2A-201ENST00000423485 KIF2CQ99661 725 aa4.3□□□□□ -1.72
TOP2A-201ENST00000423485 MAST3O60307 1309 aa4.3□□□□□ -1.72
TOP2A-201ENST00000423485 IRS2Q9Y4H2 1338 aa4.3□□□□□ -1.72
TOP2A-201ENST00000423485 ARHGEF28Q8N1W1 1705 aaKnown RBP4.3□□□□□ -1.72
TOP2A-201ENST00000423485 ANP32CO43423 234 aa4.29□□□□□ -1.72
TOP2A-201ENST00000423485 GSTO1P78417 241 aa4.29□□□□□ -1.72
TOP2A-201ENST00000423485 TRAF1Q13077 416 aa4.29□□□□□ -1.72
TOP2A-201ENST00000423485 SLC15A2Q16348 729 aa4.29□□□□□ -1.72
TOP2A-201ENST00000423485 CABLES1Q8TDN4 633 aa4.29□□□□□ -1.72
TOP2A-201ENST00000423485 GTF3C6Q969F1 213 aa4.29□□□□□ -1.72
TOP2A-201ENST00000423485 SYCP2Q9BX26 1530 aa4.29□□□□□ -1.72
TOP2A-201ENST00000423485 PLEKHH1Q9ULM0 1364 aa4.29□□□□□ -1.72
TOP2A-201ENST00000423485 E9PSI1 815 aa4.29□□□□□ -1.72
TOP2A-201ENST00000423485 HSP90AA1P07900 732 aaKnown RBP4.29□□□□□ -1.72
TOP2A-201ENST00000423485 SDHBP21912 280 aa4.29□□□□□ -1.72
TOP2A-201ENST00000423485 CHAF1AQ13111 956 aaPredicted RBP4.29□□□□□ -1.72
TOP2A-201ENST00000423485 C1orf228Q6PIY5 440 aa4.29□□□□□ -1.72
TOP2A-201ENST00000423485 DPP9Q86TI2 863 aa4.29□□□□□ -1.72
TOP2A-201ENST00000423485 EVA1BQ9NVM1 165 aa4.29□□□□□ -1.72
TOP2A-201ENST00000423485 CGNL1Q0VF96 1302 aa4.29□□□□□ -1.72
TOP2A-201ENST00000423485 POLR3DP05423 398 aaPredicted RBP4.29□□□□□ -1.72
TOP2A-201ENST00000423485 AIMP1Q12904 312 aaKnown RBP4.29□□□□□ -1.72
TOP2A-201ENST00000423485 TAF1CQ15572 869 aaPredicted RBP4.29□□□□□ -1.72
TOP2A-201ENST00000423485 TXNRD1Q16881 649 aa4.29□□□□□ -1.72
TOP2A-201ENST00000423485 SAMD7Q7Z3H4 446 aa4.29□□□□□ -1.72
TOP2A-201ENST00000423485 KRT26Q7Z3Y9 468 aa4.29□□□□□ -1.72
TOP2A-201ENST00000423485 DZIP1Q86YF9 867 aaKnown RBP4.29□□□□□ -1.72
TOP2A-201ENST00000423485 HS6ST3Q8IZP7 471 aa4.29□□□□□ -1.72
TOP2A-201ENST00000423485 L3MBTL2Q969R5 705 aa4.29□□□□□ -1.72
TOP2A-201ENST00000423485 FERMT2Q96AC1 680 aa4.29□□□□□ -1.72
TOP2A-201ENST00000423485 CCDC34Q96HJ3 373 aa4.29□□□□□ -1.72
TOP2A-201ENST00000423485 IGSF1Q8N6C5 1336 aa4.29□□□□□ -1.72
TOP2A-201ENST00000423485 PARD3Q8TEW0 1356 aa4.29□□□□□ -1.72
TOP2A-201ENST00000423485 APPP05067 770 aa4.29□□□□□ -1.72
TOP2A-201ENST00000423485 SOX10P56693 466 aa4.29□□□□□ -1.72
TOP2A-201ENST00000423485 TSC1Q92574 1164 aa4.29□□□□□ -1.72
TOP2A-201ENST00000423485 PCDH11XQ9BZA7 1347 aa4.29□□□□□ -1.72
TOP2A-201ENST00000423485 PCDH11YQ9BZA8 1340 aa4.29□□□□□ -1.72
TOP2A-201ENST00000423485 KIF13AQ9H1H9 1805 aa4.29□□□□□ -1.72
TOP2A-201ENST00000423485 MAP4K4O95819 1239 aaPredicted RBP4.29□□□□□ -1.72
TOP2A-201ENST00000423485 U2AF1L5P0DN76 240 aaPredicted RBP4.29□□□□□ -1.72
TOP2A-201ENST00000423485 U2AF1Q01081 240 aaKnown RBP eCLIP4.29□□□□□ -1.72
TOP2A-201ENST00000423485 MKRN3Q13064 507 aaKnown RBP4.29□□□□□ -1.72
TOP2A-201ENST00000423485 ODR4Q5SWX8 454 aa4.29□□□□□ -1.72
TOP2A-201ENST00000423485 LDHDQ86WU2 507 aa4.29□□□□□ -1.72
TOP2A-201ENST00000423485 MPNDQ8N594 471 aa4.29□□□□□ -1.72
TOP2A-201ENST00000423485 TSPOAP1O95153 1857 aa4.28□□□□□ -1.72
TOP2A-201ENST00000423485 KIF4AO95239 1232 aa4.28□□□□□ -1.72
TOP2A-201ENST00000423485 MAP3K11Q16584 847 aa4.28□□□□□ -1.72
TOP2A-201ENST00000423485 JARID2Q92833 1246 aaPredicted RBP4.28□□□□□ -1.72
TOP2A-201ENST00000423485 ARAP3Q8WWN8 1544 aa4.28□□□□□ -1.72
TOP2A-201ENST00000423485 TMEM131LA2VDJ0 1609 aa4.28□□□□□ -1.72
TOP2A-201ENST00000423485 ANKRD26Q9UPS8 1709 aa4.28□□□□□ -1.72
TOP2A-201ENST00000423485 REC8O95072 547 aa4.28□□□□□ -1.72
TOP2A-201ENST00000423485 CTU1Q7Z7A3 348 aaKnown RBP4.28□□□□□ -1.72
TOP2A-201ENST00000423485 RSPH3Q86UC2 560 aa4.28□□□□□ -1.72
TOP2A-201ENST00000423485 TRMT112Q9UI30 125 aaKnown RBP4.28□□□□□ -1.72
TOP2A-201ENST00000423485 MAST1Q9Y2H9 1570 aa4.28□□□□□ -1.72
TOP2A-201ENST00000423485 RGPD1P0DJD0 1748 aa4.28□□□□□ -1.72
TOP2A-201ENST00000423485 CPS1P31327 1500 aa4.28□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms