RNA–Protein interactions for RNA: ENST00000422863.1

HLA-DQA1-204, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

Gene HLA-DQA1, Length 520 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-204ENST00000422863 POLR3GLQ9BT43 218 aa10.34□□□□□ -0.75
HLA-DQA1-204ENST00000422863 TAF1DQ9H5J8 278 aaPredicted RBP10.34□□□□□ -0.75
HLA-DQA1-204ENST00000422863 LGR6Q9HBX8 967 aa10.34□□□□□ -0.75
HLA-DQA1-204ENST00000422863 COL15A1P39059 1388 aa10.34□□□□□ -0.75
HLA-DQA1-204ENST00000422863 ARFGEF2Q9Y6D5 1785 aa10.34□□□□□ -0.75
HLA-DQA1-204ENST00000422863 GRM1Q13255 1194 aa10.33□□□□□ -0.76
HLA-DQA1-204ENST00000422863 GSE1Q14687 1217 aa10.33□□□□□ -0.76
HLA-DQA1-204ENST00000422863 AMOTQ4VCS5 1084 aa10.33□□□□□ -0.76
HLA-DQA1-204ENST00000422863 TBC1D9BQ66K14 1250 aa10.33□□□□□ -0.76
HLA-DQA1-204ENST00000422863 TSKSQ9UJT2 592 aa10.33□□□□□ -0.76
HLA-DQA1-204ENST00000422863 PDE4DIPQ5VU43 2346 aa10.33□□□□□ -0.76
HLA-DQA1-204ENST00000422863 WDR33Q9C0J8 1336 aaKnown RBP10.33□□□□□ -0.76
HLA-DQA1-204ENST00000422863 FMR1Q06787 632 aaKnown RBP eCLIP10.32□□□□□ -0.76
HLA-DQA1-204ENST00000422863 MAP1SQ66K74 1059 aaPredicted RBP10.32□□□□□ -0.76
HLA-DQA1-204ENST00000422863 TAOK3Q9H2K8 898 aa10.32□□□□□ -0.76
HLA-DQA1-204ENST00000422863 ABT1Q9ULW3 272 aaKnown RBP10.32□□□□□ -0.76
HLA-DQA1-204ENST00000422863 IQCA1LA6NCM1 817 aa10.31□□□□□ -0.76
HLA-DQA1-204ENST00000422863 PDE6BP35913 854 aa10.31□□□□□ -0.76
HLA-DQA1-204ENST00000422863 LSM11P83369 360 aaKnown RBP eCLIP10.31□□□□□ -0.76
HLA-DQA1-204ENST00000422863 PDAP1Q13442 181 aaKnown RBP10.31□□□□□ -0.76
HLA-DQA1-204ENST00000422863 SULT6B1Q6IMI4 303 aa10.31□□□□□ -0.76
HLA-DQA1-204ENST00000422863 PRR5LQ6MZQ0 368 aa10.31□□□□□ -0.76
HLA-DQA1-204ENST00000422863 PAXIP1Q6ZW49 1069 aaPredicted RBP10.31□□□□□ -0.76
HLA-DQA1-204ENST00000422863 CNTROBQ8N137 903 aa10.31□□□□□ -0.76
HLA-DQA1-204ENST00000422863 ZNF330Q9Y3S2 320 aaPredicted RBP10.31□□□□□ -0.76
HLA-DQA1-204ENST00000422863 ADAMTSL1Q8N6G6 1762 aa10.31□□□□□ -0.76
HLA-DQA1-204ENST00000422863 RGS19P49795 217 aa10.3□□□□□ -0.76
HLA-DQA1-204ENST00000422863 MAP2K1Q02750 393 aaPredicted RBP10.3□□□□□ -0.76
HLA-DQA1-204ENST00000422863 CDCA8Q53HL2 280 aa10.3□□□□□ -0.76
HLA-DQA1-204ENST00000422863 TBC1D2BQ9UPU7 963 aa10.3□□□□□ -0.76
HLA-DQA1-204ENST00000422863 ZNF541Q9H0D2 1346 aa10.3□□□□□ -0.76
HLA-DQA1-204ENST00000422863 UBR2Q8IWV8 1755 aa10.29□□□□□ -0.76
HLA-DQA1-204ENST00000422863 RASSF10A6NK89 507 aa10.29□□□□□ -0.76
HLA-DQA1-204ENST00000422863 EPHX2P34913 555 aa10.29□□□□□ -0.76
HLA-DQA1-204ENST00000422863 PRPF40BQ6NWY9 871 aaKnown RBP10.29□□□□□ -0.76
HLA-DQA1-204ENST00000422863 OLFM4Q6UX06 510 aa10.29□□□□□ -0.76
HLA-DQA1-204ENST00000422863 BRIP1Q9BX63 1249 aa10.29□□□□□ -0.76
HLA-DQA1-204ENST00000422863 SLC52A2Q9HAB3 445 aa10.29□□□□□ -0.76
HLA-DQA1-204ENST00000422863 ZNF277Q9NRM2 450 aaPredicted RBP10.29□□□□□ -0.76
HLA-DQA1-204ENST00000422863 HACL1Q9UJ83 578 aa10.29□□□□□ -0.76
HLA-DQA1-204ENST00000422863 NPHP1O15259 732 aa10.28□□□□□ -0.76
HLA-DQA1-204ENST00000422863 RNMTO43148 476 aaKnown RBP10.28□□□□□ -0.76
HLA-DQA1-204ENST00000422863 CYP4F22Q6NT55 531 aa10.28□□□□□ -0.76
HLA-DQA1-204ENST00000422863 RNF123Q5XPI4 1314 aa10.28□□□□□ -0.76
HLA-DQA1-204ENST00000422863 LTBP3Q9NS15 1303 aa10.28□□□□□ -0.76
HLA-DQA1-204ENST00000422863 SCN7AQ01118 1682 aa10.28□□□□□ -0.76
HLA-DQA1-204ENST00000422863 POLR2AP24928 1970 aaKnown RBP10.27□□□□□ -0.77
HLA-DQA1-204ENST00000422863 AOC2O75106 756 aa10.27□□□□□ -0.77
HLA-DQA1-204ENST00000422863 EIF5P55010 431 aaKnown RBP10.27□□□□□ -0.77
HLA-DQA1-204ENST00000422863 AKAP4Q5JQC9 854 aa10.27□□□□□ -0.77
HLA-DQA1-204ENST00000422863 TMEM92Q6UXU6 159 aa10.27□□□□□ -0.77
HLA-DQA1-204ENST00000422863 CNKSR1Q969H4 720 aa10.27□□□□□ -0.77
HLA-DQA1-204ENST00000422863 CAPNS2Q96L46 248 aa10.27□□□□□ -0.77
HLA-DQA1-204ENST00000422863 LTBP1Q14766 1721 aa10.27□□□□□ -0.77
HLA-DQA1-204ENST00000422863 SRGNP10124 158 aa10.26□□□□□ -0.77
HLA-DQA1-204ENST00000422863 STYK1Q6J9G0 422 aa10.26□□□□□ -0.77
HLA-DQA1-204ENST00000422863 MASTLQ96GX5 879 aa10.26□□□□□ -0.77
HLA-DQA1-204ENST00000422863 GPR101Q96P66 508 aaPredicted RBP10.26□□□□□ -0.77
HLA-DQA1-204ENST00000422863 SETDB2Q96T68 719 aa10.26□□□□□ -0.77
HLA-DQA1-204ENST00000422863 BEGAINQ9BUH8 593 aa10.26□□□□□ -0.77
HLA-DQA1-204ENST00000422863 HCSTQ9UBK5 93 aa10.26□□□□□ -0.77
HLA-DQA1-204ENST00000422863 PDZRN3Q9UPQ7 1066 aa10.26□□□□□ -0.77
HLA-DQA1-204ENST00000422863 BCORQ6W2J9 1755 aa10.26□□□□□ -0.77
HLA-DQA1-204ENST00000422863 A0A087WZG4 1122 aa10.25□□□□□ -0.77
HLA-DQA1-204ENST00000422863 A1BGP04217 495 aa10.25□□□□□ -0.77
HLA-DQA1-204ENST00000422863 HMOX1P09601 288 aa10.25□□□□□ -0.77
HLA-DQA1-204ENST00000422863 CNBD1Q8NA66 436 aa10.25□□□□□ -0.77
HLA-DQA1-204ENST00000422863 MCOLN1Q9GZU1 580 aa10.25□□□□□ -0.77
HLA-DQA1-204ENST00000422863 DDX21Q9NR30 783 aaKnown RBP eCLIP10.25□□□□□ -0.77
HLA-DQA1-204ENST00000422863 GJA3Q9Y6H8 435 aa10.25□□□□□ -0.77
HLA-DQA1-204ENST00000422863 FAM177BA6PVY3 158 aa10.24□□□□□ -0.77
HLA-DQA1-204ENST00000422863 TRAF5O00463 557 aa10.24□□□□□ -0.77
HLA-DQA1-204ENST00000422863 STARD3NLO95772 234 aa10.24□□□□□ -0.77
HLA-DQA1-204ENST00000422863 PIP4K2AP48426 406 aaPredicted RBP10.24□□□□□ -0.77
HLA-DQA1-204ENST00000422863 ST5P78524 1137 aa10.24□□□□□ -0.77
HLA-DQA1-204ENST00000422863 CCDC93Q567U6 631 aa10.24□□□□□ -0.77
HLA-DQA1-204ENST00000422863 PNMA8AQ86V59 439 aaPredicted RBP10.24□□□□□ -0.77
HLA-DQA1-204ENST00000422863 SYNE4Q8N205 404 aa10.24□□□□□ -0.77
HLA-DQA1-204ENST00000422863 C7orf43Q8WVR3 580 aa10.24□□□□□ -0.77
HLA-DQA1-204ENST00000422863 THSD7BQ9C0I4 1608 aa10.24□□□□□ -0.77
HLA-DQA1-204ENST00000422863 SIPA1L3O60292 1781 aaPredicted RBP10.24□□□□□ -0.77
HLA-DQA1-204ENST00000422863 ZNF316A6NFI3 1004 aaPredicted RBP10.23□□□□□ -0.77
HLA-DQA1-204ENST00000422863 IL13P35225 146 aa10.23□□□□□ -0.77
HLA-DQA1-204ENST00000422863 FKBP4Q02790 459 aaKnown RBP eCLIP10.23□□□□□ -0.77
HLA-DQA1-204ENST00000422863 DGKZQ13574 1117 aa10.23□□□□□ -0.77
HLA-DQA1-204ENST00000422863 SOGA3Q5TF21 947 aa10.23□□□□□ -0.77
HLA-DQA1-204ENST00000422863 MORC1Q86VD1 984 aa10.23□□□□□ -0.77
HLA-DQA1-204ENST00000422863 VSIG10Q8N0Z9 540 aa10.23□□□□□ -0.77
HLA-DQA1-204ENST00000422863 AKAP11Q9UKA4 1901 aa10.23□□□□□ -0.77
HLA-DQA1-204ENST00000422863 IARSP41252 1262 aaKnown RBP10.22□□□□□ -0.77
HLA-DQA1-204ENST00000422863 ECE1P42892 770 aa10.22□□□□□ -0.77
HLA-DQA1-204ENST00000422863 MTHFSDQ2M296 383 aaKnown RBP10.22□□□□□ -0.77
HLA-DQA1-204ENST00000422863 ARSIQ5FYB1 569 aa10.22□□□□□ -0.77
HLA-DQA1-204ENST00000422863 CST9Q5W186 159 aa10.22□□□□□ -0.77
HLA-DQA1-204ENST00000422863 TTC5Q8N0Z6 440 aa10.22□□□□□ -0.77
HLA-DQA1-204ENST00000422863 ZNF496Q96IT1 587 aaPredicted RBP10.22□□□□□ -0.77
HLA-DQA1-204ENST00000422863 PANK3Q9H999 370 aa10.22□□□□□ -0.77
HLA-DQA1-204ENST00000422863 FZD9O00144 591 aa10.21□□□□□ -0.77
HLA-DQA1-204ENST00000422863 CAMTA2O94983 1202 aa10.21□□□□□ -0.77
HLA-DQA1-204ENST00000422863 NPR1P16066 1061 aa10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms