RNA–Protein interactions for RNA: ENST00000422453.6

CNBP-201, Transcript of CCHC-type zinc finger nucleic acid binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CNBP, Length 1,664 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNBP-201ENST00000422453 NLRP3Q96P20 1036 aa17.96■□□□□ 0.47
CNBP-201ENST00000422453 STK31Q9BXU1 1019 aa17.96■□□□□ 0.47
CNBP-201ENST00000422453 ABCC12Q96J65 1359 aa17.96■□□□□ 0.47
CNBP-201ENST00000422453 TWISTNBQ3B726 338 aaPredicted RBP17.96■□□□□ 0.47
CNBP-201ENST00000422453 TRMT112Q9UI30 125 aaKnown RBP17.96■□□□□ 0.47
CNBP-201ENST00000422453 RNF123Q5XPI4 1314 aa17.95■□□□□ 0.46
CNBP-201ENST00000422453 DDX58O95786 925 aaKnown RBP17.95■□□□□ 0.46
CNBP-201ENST00000422453 PHAXQ9H814 394 aaKnown RBP17.95■□□□□ 0.46
CNBP-201ENST00000422453 CRY2Q49AN0 593 aa17.94■□□□□ 0.46
CNBP-201ENST00000422453 RBM17Q96I25 401 aaKnown RBP17.94■□□□□ 0.46
CNBP-201ENST00000422453 FANCIQ9NVI1 1328 aa17.94■□□□□ 0.46
CNBP-201ENST00000422453 ATP5J2-PTCD1G3V325 749 aa17.93■□□□□ 0.46
CNBP-201ENST00000422453 NFKBIEO00221 500 aa17.93■□□□□ 0.46
CNBP-201ENST00000422453 MYH16Q9H6N6 1097 aa17.93■□□□□ 0.46
CNBP-201ENST00000422453 SH3TC1Q8TE82 1336 aa17.93■□□□□ 0.46
CNBP-201ENST00000422453 SLX4Q8IY92 1834 aa17.93■□□□□ 0.46
CNBP-201ENST00000422453 CCDC93Q567U6 631 aa17.93■□□□□ 0.46
CNBP-201ENST00000422453 SLC10A5Q5PT55 438 aa17.93■□□□□ 0.46
CNBP-201ENST00000422453 TAOK3Q9H2K8 898 aa17.93■□□□□ 0.46
CNBP-201ENST00000422453 RIC1Q4ADV7 1423 aa17.93■□□□□ 0.46
CNBP-201ENST00000422453 CACNA1SQ13698 1873 aa17.92■□□□□ 0.46
CNBP-201ENST00000422453 ANKRD36CQ5JPF3 1778 aa17.91■□□□□ 0.46
CNBP-201ENST00000422453 TCERG1O14776 1098 aaKnown RBP17.91■□□□□ 0.46
CNBP-201ENST00000422453 ZNF428Q96B54 188 aa17.91■□□□□ 0.46
CNBP-201ENST00000422453 ISCA1Q9BUE6 129 aa17.91■□□□□ 0.46
CNBP-201ENST00000422453 KDM2BQ8NHM5 1336 aa17.91■□□□□ 0.46
CNBP-201ENST00000422453 TNRC6CQ9HCJ0 1690 aaKnown RBP17.9■□□□□ 0.46
CNBP-201ENST00000422453 CCER2I3L3R5 266 aa17.9■□□□□ 0.46
CNBP-201ENST00000422453 CENPBP07199 599 aaPredicted RBP17.9■□□□□ 0.46
CNBP-201ENST00000422453 HCLS1P14317 486 aaPredicted RBP17.9■□□□□ 0.46
CNBP-201ENST00000422453 HOXA10P31260 410 aaPredicted RBP17.9■□□□□ 0.46
CNBP-201ENST00000422453 C1QTNF8P60827 252 aa17.9■□□□□ 0.46
CNBP-201ENST00000422453 RTKN2Q8IZC4 609 aa17.9■□□□□ 0.46
CNBP-201ENST00000422453 C7orf43Q8WVR3 580 aa17.9■□□□□ 0.46
CNBP-201ENST00000422453 TMX4Q9H1E5 349 aaPredicted RBP17.9■□□□□ 0.46
CNBP-201ENST00000422453 ZC3H4Q9UPT8 1303 aaKnown RBP17.9■□□□□ 0.46
CNBP-201ENST00000422453 SBF1O95248 1867 aa17.9■□□□□ 0.46
CNBP-201ENST00000422453 SLC4A2P04920 1241 aa17.9■□□□□ 0.46
CNBP-201ENST00000422453 TRIM28Q13263 835 aaKnown RBP17.9■□□□□ 0.46
CNBP-201ENST00000422453 CRAMP1Q96RY5 1269 aa17.9■□□□□ 0.46
CNBP-201ENST00000422453 MYD88Q99836 296 aa17.9■□□□□ 0.46
CNBP-201ENST00000422453 LTBP3Q9NS15 1303 aa17.89■□□□□ 0.46
CNBP-201ENST00000422453 ARFGEF2Q9Y6D5 1785 aa17.89■□□□□ 0.45
CNBP-201ENST00000422453 EXOSC9Q06265 439 aaKnown RBP17.89■□□□□ 0.45
CNBP-201ENST00000422453 C3orf67Q6ZVT6 689 aa17.89■□□□□ 0.45
CNBP-201ENST00000422453 SYNE4Q8N205 404 aa17.89■□□□□ 0.45
CNBP-201ENST00000422453 CC2D2BQ6DHV5 1058 aa17.88■□□□□ 0.45
CNBP-201ENST00000422453 FAM89AQ96GI7 184 aa17.88■□□□□ 0.45
CNBP-201ENST00000422453 PRELPP51888 382 aa17.87■□□□□ 0.45
CNBP-201ENST00000422453 FKBP4Q02790 459 aaKnown RBP eCLIP17.87■□□□□ 0.45
CNBP-201ENST00000422453 RTL5Q5HYW3 569 aaPredicted RBP17.87■□□□□ 0.45
CNBP-201ENST00000422453 DDX46Q7L014 1031 aaKnown RBP17.87■□□□□ 0.45
CNBP-201ENST00000422453 SPINK5Q9NQ38 1064 aaPredicted RBP17.87■□□□□ 0.45
CNBP-201ENST00000422453 MAP3K2Q9Y2U5 619 aa17.87■□□□□ 0.45
CNBP-201ENST00000422453 PPEF1O14829 653 aaPredicted RBP17.87■□□□□ 0.45
CNBP-201ENST00000422453 VAMP4O75379 141 aa17.87■□□□□ 0.45
CNBP-201ENST00000422453 HSP90B1P14625 803 aaKnown RBP17.87■□□□□ 0.45
CNBP-201ENST00000422453 NEXNQ0ZGT2 675 aa17.87■□□□□ 0.45
CNBP-201ENST00000422453 DPY19L2Q6NUT2 758 aa17.87■□□□□ 0.45
CNBP-201ENST00000422453 OLFM4Q6UX06 510 aa17.87■□□□□ 0.45
CNBP-201ENST00000422453 KSR2Q6VAB6 950 aa17.87■□□□□ 0.45
CNBP-201ENST00000422453 METTL22Q9BUU2 404 aaPredicted RBP17.87■□□□□ 0.45
CNBP-201ENST00000422453 FER1L6Q2WGJ9 1857 aa17.86■□□□□ 0.45
CNBP-201ENST00000422453 PI4KAP2A4QPH2 592 aa17.86■□□□□ 0.45
CNBP-201ENST00000422453 GRIPAP1Q4V328 841 aa17.86■□□□□ 0.45
CNBP-201ENST00000422453 PI4KAP1Q8N8J0 262 aa17.86■□□□□ 0.45
CNBP-201ENST00000422453 CCDC191Q8NCU4 936 aa17.86■□□□□ 0.45
CNBP-201ENST00000422453 CCDC88AQ3V6T2 1871 aa17.85■□□□□ 0.45
CNBP-201ENST00000422453 C16orf71Q8IYS4 520 aaPredicted RBP17.85■□□□□ 0.45
CNBP-201ENST00000422453 ZBTB38Q8NAP3 1195 aaPredicted RBP17.85■□□□□ 0.45
CNBP-201ENST00000422453 NMRK2Q9NPI5 230 aa17.85■□□□□ 0.45
CNBP-201ENST00000422453 CWC25Q9NXE8 425 aaPredicted RBP17.85■□□□□ 0.45
CNBP-201ENST00000422453 GLTPD2A6NH11 291 aa17.84■□□□□ 0.45
CNBP-201ENST00000422453 IRS4O14654 1257 aaPredicted RBP17.84■□□□□ 0.45
CNBP-201ENST00000422453 KIF3CO14782 793 aa17.84■□□□□ 0.45
CNBP-201ENST00000422453 BBOX1O75936 387 aa17.84■□□□□ 0.45
CNBP-201ENST00000422453 DIEXFQ68CQ4 756 aaKnown RBP17.84■□□□□ 0.45
CNBP-201ENST00000422453 ZNF277Q9NRM2 450 aaPredicted RBP17.84■□□□□ 0.45
CNBP-201ENST00000422453 ABCC4O15439 1325 aa17.84■□□□□ 0.45
CNBP-201ENST00000422453 FLIIQ13045 1269 aa17.83■□□□□ 0.45
CNBP-201ENST00000422453 FKBP5Q13451 457 aaPredicted RBP17.83■□□□□ 0.45
CNBP-201ENST00000422453 G2E3Q7L622 706 aa17.83■□□□□ 0.45
CNBP-201ENST00000422453 ZNF521Q96K83 1311 aa17.83■□□□□ 0.44
CNBP-201ENST00000422453 RRAGCQ9HB90 399 aa17.83■□□□□ 0.44
CNBP-201ENST00000422453 GRAPQ13588 217 aa17.82■□□□□ 0.44
CNBP-201ENST00000422453 GRAPLQ8TC17 118 aaPredicted RBP17.82■□□□□ 0.44
CNBP-201ENST00000422453 PSMD1Q99460 953 aa17.82■□□□□ 0.44
CNBP-201ENST00000422453 ATP6V0A2Q9Y487 856 aa17.82■□□□□ 0.44
CNBP-201ENST00000422453 E9PSI1 815 aa17.81■□□□□ 0.44
CNBP-201ENST00000422453 PCCAP05165 728 aaPredicted RBP17.81■□□□□ 0.44
CNBP-201ENST00000422453 IARSP41252 1262 aaKnown RBP17.8■□□□□ 0.44
CNBP-201ENST00000422453 SF3B3Q15393 1217 aaKnown RBP17.8■□□□□ 0.44
CNBP-201ENST00000422453 JDP2Q8WYK2 163 aa17.8■□□□□ 0.44
CNBP-201ENST00000422453 TIAM2Q8IVF5 1701 aa17.8■□□□□ 0.44
CNBP-201ENST00000422453 TOMM70O94826 608 aa17.8■□□□□ 0.44
CNBP-201ENST00000422453 TMC4Q7Z404 712 aa17.8■□□□□ 0.44
CNBP-201ENST00000422453 SP8Q8IXZ3 490 aa17.8■□□□□ 0.44
CNBP-201ENST00000422453 DICER1Q9UPY3 1922 aaKnown RBP17.79■□□□□ 0.44
CNBP-201ENST00000422453 IGKV5-2P06315 115 aa17.79■□□□□ 0.44
CNBP-201ENST00000422453 VEGFAP15692 232 aaPredicted RBP17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms