RNA–Protein interactions for RNA: ENST00000422392.6

CDH1-202, Transcript of cadherin 1, humanhuman

TSL 1 (best) BASIC

Gene CDH1, Length 2,567 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-202ENST00000422392 ERC1Q8IUD2 1116 aa18.92■□□□□ 0.62
CDH1-202ENST00000422392 LINS1Q8NG48 757 aa18.92■□□□□ 0.62
CDH1-202ENST00000422392 TPCN1Q9ULQ1 816 aa18.92■□□□□ 0.62
CDH1-202ENST00000422392 HEG1Q9ULI3 1381 aa18.92■□□□□ 0.62
CDH1-202ENST00000422392 PIP4K2AP48426 406 aaPredicted RBP18.91■□□□□ 0.62
CDH1-202ENST00000422392 ANKLE2Q86XL3 938 aa18.91■□□□□ 0.62
CDH1-202ENST00000422392 EDC3Q96F86 508 aaKnown RBP18.91■□□□□ 0.62
CDH1-202ENST00000422392 IGKV5-2P06315 115 aa18.91■□□□□ 0.62
CDH1-202ENST00000422392 PDIA6Q15084 440 aa18.9■□□□□ 0.62
CDH1-202ENST00000422392 FAM173BQ6P4H8 233 aa18.9■□□□□ 0.62
CDH1-202ENST00000422392 FERMT3Q86UX7 667 aa18.9■□□□□ 0.62
CDH1-202ENST00000422392 PHRF1Q9P1Y6 1649 aaKnown RBP18.9■□□□□ 0.62
CDH1-202ENST00000422392 ZKSCAN1P17029 563 aaPredicted RBP18.9■□□□□ 0.62
CDH1-202ENST00000422392 RIC3Q7Z5B4 369 aa18.9■□□□□ 0.62
CDH1-202ENST00000422392 SIPA1L3O60292 1781 aaPredicted RBP18.9■□□□□ 0.62
CDH1-202ENST00000422392 PLCB2Q00722 1185 aa18.89■□□□□ 0.62
CDH1-202ENST00000422392 FSD1Q9BTV5 496 aa18.89■□□□□ 0.62
CDH1-202ENST00000422392 CHMP3Q9Y3E7 222 aa18.89■□□□□ 0.62
CDH1-202ENST00000422392 NDUFB9Q9Y6M9 179 aa18.89■□□□□ 0.62
CDH1-202ENST00000422392 ADGRL3Q9HAR2 1447 aa18.89■□□□□ 0.61
CDH1-202ENST00000422392 EPHA10Q5JZY3 1008 aa18.89■□□□□ 0.61
CDH1-202ENST00000422392 MAP4K1Q92918 833 aa18.89■□□□□ 0.61
CDH1-202ENST00000422392 DDX21Q9NR30 783 aaKnown RBP eCLIP18.89■□□□□ 0.61
CDH1-202ENST00000422392 SLC27A2O14975 620 aa18.88■□□□□ 0.61
CDH1-202ENST00000422392 MCM5P33992 734 aa18.88■□□□□ 0.61
CDH1-202ENST00000422392 ZNF589Q86UQ0 364 aaPredicted RBP18.88■□□□□ 0.61
CDH1-202ENST00000422392 KCNB2Q92953 911 aa18.88■□□□□ 0.61
CDH1-202ENST00000422392 TM6SF1Q9BZW5 370 aa18.88■□□□□ 0.61
CDH1-202ENST00000422392 ATP6V1DQ9Y5K8 247 aa18.88■□□□□ 0.61
CDH1-202ENST00000422392 UQCRHLA0A096LP55 91 aa18.88■□□□□ 0.61
CDH1-202ENST00000422392 ADCY5O95622 1261 aa18.88■□□□□ 0.61
CDH1-202ENST00000422392 UQCRHP07919 91 aa18.88■□□□□ 0.61
CDH1-202ENST00000422392 ZC3H6P61129 1189 aaKnown RBP18.88■□□□□ 0.61
CDH1-202ENST00000422392 SH2B1Q9NRF2 756 aaPredicted RBP18.88■□□□□ 0.61
CDH1-202ENST00000422392 NCAPD2Q15021 1401 aa18.88■□□□□ 0.61
CDH1-202ENST00000422392 CHGBP05060 677 aa18.88■□□□□ 0.61
CDH1-202ENST00000422392 CDC37L1Q7L3B6 337 aa18.88■□□□□ 0.61
CDH1-202ENST00000422392 ZSCAN31Q96LW9 406 aaPredicted RBP18.88■□□□□ 0.61
CDH1-202ENST00000422392 C5P01031 1676 aa18.87■□□□□ 0.61
CDH1-202ENST00000422392 DDX58O95786 925 aaKnown RBP18.87■□□□□ 0.61
CDH1-202ENST00000422392 FAM184AQ8NB25 1140 aa18.87■□□□□ 0.61
CDH1-202ENST00000422392 STK3Q13188 491 aa18.87■□□□□ 0.61
CDH1-202ENST00000422392 LARP1BQ659C4 914 aaKnown RBP18.87■□□□□ 0.61
CDH1-202ENST00000422392 C17orf53Q8N3J3 647 aaPredicted RBP18.87■□□□□ 0.61
CDH1-202ENST00000422392 TTC12Q9H892 705 aaPredicted RBP18.87■□□□□ 0.61
CDH1-202ENST00000422392 MYD88Q99836 296 aa18.86■□□□□ 0.61
CDH1-202ENST00000422392 UTYO14607 1347 aa18.86■□□□□ 0.61
CDH1-202ENST00000422392 ZNF790Q6PG37 636 aa18.86■□□□□ 0.61
CDH1-202ENST00000422392 COPS6Q7L5N1 327 aa18.86■□□□□ 0.61
CDH1-202ENST00000422392 XAGE3Q8WTP9 111 aa18.86■□□□□ 0.61
CDH1-202ENST00000422392 FAM13BQ9NYF5 915 aa18.86■□□□□ 0.61
CDH1-202ENST00000422392 NEURL1BA8MQ27 555 aa18.85■□□□□ 0.61
CDH1-202ENST00000422392 NFATC2IPQ8NCF5 419 aa18.85■□□□□ 0.61
CDH1-202ENST00000422392 NPHP4O75161 1426 aaPredicted RBP18.85■□□□□ 0.61
CDH1-202ENST00000422392 KIAA2012Q0VF49 1180 aa18.85■□□□□ 0.61
CDH1-202ENST00000422392 CSPP1Q1MSJ5 1256 aa18.85■□□□□ 0.61
CDH1-202ENST00000422392 UVSSAQ2YD98 709 aa18.85■□□□□ 0.61
CDH1-202ENST00000422392 TTC6Q86TZ1 520 aa18.85■□□□□ 0.61
CDH1-202ENST00000422392 FUCA2Q9BTY2 467 aa18.85■□□□□ 0.61
CDH1-202ENST00000422392 HDAC5Q9UQL6 1122 aa18.85■□□□□ 0.61
CDH1-202ENST00000422392 AP5Z1O43299 807 aa18.84■□□□□ 0.61
CDH1-202ENST00000422392 GCKRQ14397 625 aa18.84■□□□□ 0.61
CDH1-202ENST00000422392 BLOC1S2Q6QNY1 142 aa18.84■□□□□ 0.61
CDH1-202ENST00000422392 LETM1O95202 739 aaPredicted RBP18.83■□□□□ 0.6
CDH1-202ENST00000422392 TERF1P54274 439 aa18.83■□□□□ 0.6
CDH1-202ENST00000422392 CAMK4Q16566 473 aa18.83■□□□□ 0.6
CDH1-202ENST00000422392 SLIT3O75094 1523 aa18.83■□□□□ 0.6
CDH1-202ENST00000422392 TOB2Q14106 344 aaPredicted RBP18.83■□□□□ 0.6
CDH1-202ENST00000422392 LARP1Q6PKG0 1096 aaKnown RBP18.83■□□□□ 0.6
CDH1-202ENST00000422392 CCDC9Q9Y3X0 531 aaKnown RBP18.83■□□□□ 0.6
CDH1-202ENST00000422392 OVOS2A0A0G2JMS6 1433 aa18.82■□□□□ 0.6
CDH1-202ENST00000422392 HIP1O00291 1037 aa18.82■□□□□ 0.6
CDH1-202ENST00000422392 NEXNQ0ZGT2 675 aa18.82■□□□□ 0.6
CDH1-202ENST00000422392 ZNF496Q96IT1 587 aaPredicted RBP18.82■□□□□ 0.6
CDH1-202ENST00000422392 NLRP2Q9NX02 1062 aa18.82■□□□□ 0.6
CDH1-202ENST00000422392 ERBB3P21860 1342 aa18.82■□□□□ 0.6
CDH1-202ENST00000422392 KDM4AO75164 1064 aa18.82■□□□□ 0.6
CDH1-202ENST00000422392 DNTTIP2Q5QJE6 756 aaKnown RBP18.82■□□□□ 0.6
CDH1-202ENST00000422392 KRT28Q7Z3Y7 464 aa18.82■□□□□ 0.6
CDH1-202ENST00000422392 COL15A1P39059 1388 aa18.82■□□□□ 0.6
CDH1-202ENST00000422392 MED23Q9ULK4 1368 aa18.82■□□□□ 0.6
CDH1-202ENST00000422392 KDM6AO15550 1401 aaPredicted RBP18.81■□□□□ 0.6
CDH1-202ENST00000422392 RPS6KB1P23443 525 aa18.81■□□□□ 0.6
CDH1-202ENST00000422392 PSMA5P28066 241 aa18.81■□□□□ 0.6
CDH1-202ENST00000422392 CCDC129Q6ZRS4 1044 aa18.81■□□□□ 0.6
CDH1-202ENST00000422392 SEC62Q99442 399 aaKnown RBP18.81■□□□□ 0.6
CDH1-202ENST00000422392 SLC52A2Q9HAB3 445 aa18.81■□□□□ 0.6
CDH1-202ENST00000422392 TFIP11Q9UBB9 837 aaKnown RBP18.81■□□□□ 0.6
CDH1-202ENST00000422392 DBNLQ9UJU6 430 aaKnown RBP18.81■□□□□ 0.6
CDH1-202ENST00000422392 USP16Q9Y5T5 823 aa18.81■□□□□ 0.6
CDH1-202ENST00000422392 LIG1P18858 919 aa18.81■□□□□ 0.6
CDH1-202ENST00000422392 ATP5J2-PTCD1G3V325 749 aa18.8■□□□□ 0.6
CDH1-202ENST00000422392 PTCD1O75127 700 aaKnown RBP18.8■□□□□ 0.6
CDH1-202ENST00000422392 RAPGEF4Q8WZA2 1011 aa18.8■□□□□ 0.6
CDH1-202ENST00000422392 TFCP2Q12800 502 aa18.8■□□□□ 0.6
CDH1-202ENST00000422392 RNF20Q5VTR2 975 aa18.8■□□□□ 0.6
CDH1-202ENST00000422392 DDX17Q92841 729 aaKnown RBP18.8■□□□□ 0.6
CDH1-202ENST00000422392 DNAJC2Q99543 621 aaKnown RBP18.8■□□□□ 0.6
CDH1-202ENST00000422392 PDCL3Q9H2J4 239 aa18.8■□□□□ 0.6
CDH1-202ENST00000422392 AFDNP55196 1824 aaKnown RBP18.79■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 192.3 ms