RNA–Protein interactions for RNA: ENST00000422074.2

LINC00397-201, long intergenic non-protein coding RNA 397, humanhuman

TSL 3 BASIC

Gene LINC00397, Length 344 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00397-201ENST00000422074 ADARB2-AS1A8MUL3 147 aa8.33□□□□□ -1.08
LINC00397-201ENST00000422074 SPEM2Q0P670 501 aa8.33□□□□□ -1.08
LINC00397-201ENST00000422074 PRIMPOLQ96LW4 560 aa8.33□□□□□ -1.08
LINC00397-201ENST00000422074 EFCC1Q9HA90 598 aa8.33□□□□□ -1.08
LINC00397-201ENST00000422074 C11orf16Q9NQ32 467 aa8.33□□□□□ -1.08
LINC00397-201ENST00000422074 CXXC1Q9P0U4 656 aaPredicted RBP8.33□□□□□ -1.08
LINC00397-201ENST00000422074 PHF20L1A8MW92 1017 aa8.32□□□□□ -1.08
LINC00397-201ENST00000422074 SNRPNP63162 240 aaKnown RBP8.32□□□□□ -1.08
LINC00397-201ENST00000422074 C11orf91Q3C1V1 193 aa8.32□□□□□ -1.08
LINC00397-201ENST00000422074 LINC00114Q6XXX2 140 aa8.32□□□□□ -1.08
LINC00397-201ENST00000422074 SYT9Q86SS6 491 aa8.32□□□□□ -1.08
LINC00397-201ENST00000422074 TMEM151AQ8N4L1 468 aa8.32□□□□□ -1.08
LINC00397-201ENST00000422074 TNFRSF25Q93038 417 aa8.32□□□□□ -1.08
LINC00397-201ENST00000422074 VTI1AQ96AJ9 217 aa8.32□□□□□ -1.08
LINC00397-201ENST00000422074 KLK14Q9P0G3 267 aa8.32□□□□□ -1.08
LINC00397-201ENST00000422074 PRMT3O60678 531 aa8.31□□□□□ -1.08
LINC00397-201ENST00000422074 GDF11O95390 407 aa8.31□□□□□ -1.08
LINC00397-201ENST00000422074 INPP5BP32019 993 aa8.31□□□□□ -1.08
LINC00397-201ENST00000422074 IRS1P35568 1242 aa8.31□□□□□ -1.08
LINC00397-201ENST00000422074 PCBP4P57723 403 aaKnown RBP8.31□□□□□ -1.08
LINC00397-201ENST00000422074 PODNQ7Z5L7 613 aa8.31□□□□□ -1.08
LINC00397-201ENST00000422074 SLAIN2Q9P270 581 aa8.31□□□□□ -1.08
LINC00397-201ENST00000422074 LRFN2Q9ULH4 789 aa8.31□□□□□ -1.08
LINC00397-201ENST00000422074 ELOA3CA0A087WX78 387 aaPredicted RBP8.3□□□□□ -1.08
LINC00397-201ENST00000422074 ELOA3DA6NLF2 546 aaPredicted RBP8.3□□□□□ -1.08
LINC00397-201ENST00000422074 GRNP28799 593 aaKnown RBP8.3□□□□□ -1.08
LINC00397-201ENST00000422074 DGKZQ13574 1117 aa8.3□□□□□ -1.08
LINC00397-201ENST00000422074 ELOA3BQ3SY89 546 aa8.3□□□□□ -1.08
LINC00397-201ENST00000422074 COX20Q5RI15 118 aa8.3□□□□□ -1.08
LINC00397-201ENST00000422074 ELOA3Q8NG57 546 aa8.3□□□□□ -1.08
LINC00397-201ENST00000422074 MKL2Q9ULH7 1088 aa8.3□□□□□ -1.08
LINC00397-201ENST00000422074 DGKGP49619 791 aa8.29□□□□□ -1.08
LINC00397-201ENST00000422074 CHSY3Q70JA7 882 aa8.29□□□□□ -1.08
LINC00397-201ENST00000422074 GSX2Q9BZM3 304 aa8.29□□□□□ -1.08
LINC00397-201ENST00000422074 PTCD1O75127 700 aaKnown RBP8.28□□□□□ -1.08
LINC00397-201ENST00000422074 MICAL2O94851 1124 aa8.28□□□□□ -1.08
LINC00397-201ENST00000422074 IDH3AP50213 366 aa8.28□□□□□ -1.08
LINC00397-201ENST00000422074 NEUROD1Q13562 356 aa8.28□□□□□ -1.08
LINC00397-201ENST00000422074 IFT43Q96FT9 208 aa8.28□□□□□ -1.08
LINC00397-201ENST00000422074 TMEM88BA6NKF7 163 aa8.27□□□□□ -1.09
LINC00397-201ENST00000422074 OPLAHO14841 1288 aa8.27□□□□□ -1.09
LINC00397-201ENST00000422074 PIK3R2O00459 728 aa8.26□□□□□ -1.09
LINC00397-201ENST00000422074 EPB42P16452 691 aa8.26□□□□□ -1.09
LINC00397-201ENST00000422074 AMPD1P23109 780 aa8.26□□□□□ -1.09
LINC00397-201ENST00000422074 ARSDP51689 593 aa8.26□□□□□ -1.09
LINC00397-201ENST00000422074 CCINQ13939 588 aa8.26□□□□□ -1.09
LINC00397-201ENST00000422074 C16orf46Q6P387 395 aa8.26□□□□□ -1.09
LINC00397-201ENST00000422074 ALYREFQ86V81 257 aaKnown RBP8.26□□□□□ -1.09
LINC00397-201ENST00000422074 SAP130Q9H0E3 1048 aa8.26□□□□□ -1.09
LINC00397-201ENST00000422074 GNB5O14775 395 aa8.25□□□□□ -1.09
LINC00397-201ENST00000422074 EGFRP00533 1210 aa8.25□□□□□ -1.09
LINC00397-201ENST00000422074 ALAS2P22557 587 aa8.25□□□□□ -1.09
LINC00397-201ENST00000422074 CAPN12Q6ZSI9 719 aa8.25□□□□□ -1.09
LINC00397-201ENST00000422074 DCAF5Q96JK2 942 aa8.25□□□□□ -1.09
LINC00397-201ENST00000422074 RRAGCQ9HB90 399 aa8.25□□□□□ -1.09
LINC00397-201ENST00000422074 PRDM6Q9NQX0 595 aa8.25□□□□□ -1.09
LINC00397-201ENST00000422074 STARD13Q9Y3M8 1113 aa8.25□□□□□ -1.09
LINC00397-201ENST00000422074 TNFRSF10BO14763 440 aa8.24□□□□□ -1.09
LINC00397-201ENST00000422074 MAP3K6O95382 1288 aa8.24□□□□□ -1.09
LINC00397-201ENST00000422074 ATP2B4P23634 1241 aa8.24□□□□□ -1.09
LINC00397-201ENST00000422074 BRD2P25440 801 aaKnown RBP8.24□□□□□ -1.09
LINC00397-201ENST00000422074 RAB44Q7Z6P3 723 aaPredicted RBP8.24□□□□□ -1.09
LINC00397-201ENST00000422074 BHMTQ93088 406 aa8.24□□□□□ -1.09
LINC00397-201ENST00000422074 ADH7P40394 386 aa8.23□□□□□ -1.09
LINC00397-201ENST00000422074 TREML1Q86YW5 311 aa8.23□□□□□ -1.09
LINC00397-201ENST00000422074 COL8A1P27658 744 aa8.22□□□□□ -1.09
LINC00397-201ENST00000422074 COL9A3Q14050 684 aaPredicted RBP8.22□□□□□ -1.09
LINC00397-201ENST00000422074 C20orf204Q6ZNR8 217 aa8.22□□□□□ -1.09
LINC00397-201ENST00000422074 ETFBKMTQ8IXQ9 262 aa8.22□□□□□ -1.09
LINC00397-201ENST00000422074 KCTD17Q8N5Z5 321 aa8.22□□□□□ -1.09
LINC00397-201ENST00000422074 GTF3C5Q9Y5Q8 519 aaPredicted RBP8.22□□□□□ -1.09
LINC00397-201ENST00000422074 FAM26DQ5JW98 314 aa8.21□□□□□ -1.1
LINC00397-201ENST00000422074 RTCBQ9Y3I0 505 aaKnown RBP8.21□□□□□ -1.1
LINC00397-201ENST00000422074 SSFA2P28290 1259 aa8.2□□□□□ -1.1
LINC00397-201ENST00000422074 NAA30Q147X3 362 aaPredicted RBP8.2□□□□□ -1.1
LINC00397-201ENST00000422074 MICALL1Q8N3F8 863 aa8.2□□□□□ -1.1
LINC00397-201ENST00000422074 MKNK1Q9BUB5 465 aa8.2□□□□□ -1.1
LINC00397-201ENST00000422074 SUV39H2Q9H5I1 410 aa8.2□□□□□ -1.1
LINC00397-201ENST00000422074 ZFATQ9P243 1243 aa8.2□□□□□ -1.1
LINC00397-201ENST00000422074 STIM2Q9P246 746 aa8.2□□□□□ -1.1
LINC00397-201ENST00000422074 KCNMB2Q9Y691 235 aa8.2□□□□□ -1.1
LINC00397-201ENST00000422074 IGHA1P01876 353 aa8.19□□□□□ -1.1
LINC00397-201ENST00000422074 ITGB2P05107 769 aa8.19□□□□□ -1.1
LINC00397-201ENST00000422074 NFKB1P19838 968 aa8.19□□□□□ -1.1
LINC00397-201ENST00000422074 TRIM11Q96F44 468 aa8.19□□□□□ -1.1
LINC00397-201ENST00000422074 PNMA5Q96PV4 448 aa8.19□□□□□ -1.1
LINC00397-201ENST00000422074 NOP53Q9NZM5 478 aaKnown RBP8.19□□□□□ -1.1
LINC00397-201ENST00000422074 PCSK7Q16549 785 aa8.18□□□□□ -1.1
LINC00397-201ENST00000422074 DNAJB12Q9NXW2 375 aaKnown RBP8.18□□□□□ -1.1
LINC00397-201ENST00000422074 SEPT3Q9UH03 358 aa8.18□□□□□ -1.1
LINC00397-201ENST00000422074 SLC6A14Q9UN76 642 aa8.18□□□□□ -1.1
LINC00397-201ENST00000422074 TIMELESSQ9UNS1 1208 aa8.18□□□□□ -1.1
LINC00397-201ENST00000422074 M0R082 166 aa8.17□□□□□ -1.1
LINC00397-201ENST00000422074 ALBP02768 609 aa8.17□□□□□ -1.1
LINC00397-201ENST00000422074 TARSP26639 723 aaKnown RBP8.17□□□□□ -1.1
LINC00397-201ENST00000422074 PLA2G4EQ3MJ16 856 aa8.17□□□□□ -1.1
LINC00397-201ENST00000422074 PHLDB3Q6NSJ2 640 aa8.17□□□□□ -1.1
LINC00397-201ENST00000422074 ILDR2Q71H61 639 aa8.17□□□□□ -1.1
LINC00397-201ENST00000422074 RGL4Q8IZJ4 473 aa8.17□□□□□ -1.1
LINC00397-201ENST00000422074 ZNF417Q8TAU3 575 aa8.17□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms