RNA–Protein interactions for RNA: ENST00000421968.6

UFD1-203, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

TSL 3

Gene UFD1, Length 670 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-203ENST00000421968 USP48Q86UV5 1035 aa16.49■□□□□ 0.23
UFD1-203ENST00000421968 NIM1KQ8IY84 436 aa16.49■□□□□ 0.23
UFD1-203ENST00000421968 ZNF296Q8WUU4 475 aaPredicted RBP16.49■□□□□ 0.23
UFD1-203ENST00000421968 DLK2Q6UY11 383 aa16.48■□□□□ 0.23
UFD1-203ENST00000421968 C2orf69Q8N8R5 385 aa16.48■□□□□ 0.23
UFD1-203ENST00000421968 GBA2Q9HCG7 927 aaPredicted RBP16.48■□□□□ 0.23
UFD1-203ENST00000421968 CAMTA2O94983 1202 aa16.47■□□□□ 0.23
UFD1-203ENST00000421968 GMPSP49915 693 aaPredicted RBP16.47■□□□□ 0.23
UFD1-203ENST00000421968 HIRAP54198 1017 aaPredicted RBP16.47■□□□□ 0.23
UFD1-203ENST00000421968 LGR6Q9HBX8 967 aa16.47■□□□□ 0.23
UFD1-203ENST00000421968 SNED1Q8TER0 1413 aa16.46■□□□□ 0.23
UFD1-203ENST00000421968 POTEFA5A3E0 1075 aa16.46■□□□□ 0.23
UFD1-203ENST00000421968 SLC10A3P09131 477 aa16.46■□□□□ 0.23
UFD1-203ENST00000421968 CC2D2BQ6DHV5 1058 aa16.46■□□□□ 0.23
UFD1-203ENST00000421968 AEBP1Q8IUX7 1158 aa16.46■□□□□ 0.23
UFD1-203ENST00000421968 CARD14Q9BXL6 1004 aa16.46■□□□□ 0.23
UFD1-203ENST00000421968 IL6STP40189 918 aaPredicted RBP16.45■□□□□ 0.22
UFD1-203ENST00000421968 REM2Q8IYK8 340 aaPredicted RBP16.45■□□□□ 0.22
UFD1-203ENST00000421968 NPC1L1Q9UHC9 1359 aa16.44■□□□□ 0.22
UFD1-203ENST00000421968 TBC1D8O95759 1140 aa16.44■□□□□ 0.22
UFD1-203ENST00000421968 TNNT2P45379 298 aaPredicted RBP16.44■□□□□ 0.22
UFD1-203ENST00000421968 TRPM4Q8TD43 1214 aa16.44■□□□□ 0.22
UFD1-203ENST00000421968 CXCL9Q07325 125 aa16.43■□□□□ 0.22
UFD1-203ENST00000421968 TPTE2Q6XPS3 522 aa16.43■□□□□ 0.22
UFD1-203ENST00000421968 BCL2L13Q9BXK5 485 aa16.43■□□□□ 0.22
UFD1-203ENST00000421968 PPIP5K2O43314 1243 aa16.42■□□□□ 0.22
UFD1-203ENST00000421968 DZIP3Q86Y13 1208 aaKnown RBP16.42■□□□□ 0.22
UFD1-203ENST00000421968 PITPNM2Q9BZ72 1349 aa16.42■□□□□ 0.22
UFD1-203ENST00000421968 FAM177BA6PVY3 158 aa16.41■□□□□ 0.22
UFD1-203ENST00000421968 RNMTO43148 476 aaKnown RBP16.41■□□□□ 0.22
UFD1-203ENST00000421968 MNX1P50219 401 aaPredicted RBP16.41■□□□□ 0.22
UFD1-203ENST00000421968 GRIPAP1Q4V328 841 aa16.41■□□□□ 0.22
UFD1-203ENST00000421968 INTS3Q68E01 1043 aaKnown RBP16.41■□□□□ 0.22
UFD1-203ENST00000421968 KRT26Q7Z3Y9 468 aa16.41■□□□□ 0.22
UFD1-203ENST00000421968 TTC5Q8N0Z6 440 aa16.41■□□□□ 0.22
UFD1-203ENST00000421968 GPR25O00155 361 aa16.4■□□□□ 0.22
UFD1-203ENST00000421968 AOC3Q16853 763 aa16.4■□□□□ 0.22
UFD1-203ENST00000421968 ZNRF3Q9ULT6 936 aa16.4■□□□□ 0.22
UFD1-203ENST00000421968 MRC1P22897 1456 aa16.4■□□□□ 0.22
UFD1-203ENST00000421968 POLR2AP24928 1970 aaKnown RBP16.4■□□□□ 0.22
UFD1-203ENST00000421968 CDHR2Q9BYE9 1310 aa16.4■□□□□ 0.22
UFD1-203ENST00000421968 A1BGP04217 495 aa16.39■□□□□ 0.21
UFD1-203ENST00000421968 SULT6B1Q6IMI4 303 aa16.39■□□□□ 0.21
UFD1-203ENST00000421968 TEX13AQ9BXU3 409 aaPredicted RBP16.39■□□□□ 0.21
UFD1-203ENST00000421968 CNOT7Q9UIV1 285 aaKnown RBP16.39■□□□□ 0.21
UFD1-203ENST00000421968 UBR2Q8IWV8 1755 aa16.38■□□□□ 0.21
UFD1-203ENST00000421968 PAPPA2Q9BXP8 1791 aa16.38■□□□□ 0.21
UFD1-203ENST00000421968 H7C1D1 291 aa16.38■□□□□ 0.21
UFD1-203ENST00000421968 TCERG1O14776 1098 aaKnown RBP16.38■□□□□ 0.21
UFD1-203ENST00000421968 GTF2E1P29083 439 aaPredicted RBP16.38■□□□□ 0.21
UFD1-203ENST00000421968 CLEC4GQ6UXB4 293 aa16.38■□□□□ 0.21
UFD1-203ENST00000421968 OTUD5Q96G74 571 aa16.38■□□□□ 0.21
UFD1-203ENST00000421968 ZNF652Q9Y2D9 606 aa16.38■□□□□ 0.21
UFD1-203ENST00000421968 SHTN1A0MZ66 631 aa16.37■□□□□ 0.21
UFD1-203ENST00000421968 EN2P19622 333 aaPredicted RBP16.37■□□□□ 0.21
UFD1-203ENST00000421968 RASAL3Q86YV0 1011 aa16.37■□□□□ 0.21
UFD1-203ENST00000421968 NIP7Q9Y221 180 aaKnown RBP eCLIP16.37■□□□□ 0.21
UFD1-203ENST00000421968 ADM5C9JUS6 153 aa16.36■□□□□ 0.21
UFD1-203ENST00000421968 H0YGN5 161 aa16.36■□□□□ 0.21
UFD1-203ENST00000421968 FKTNO75072 461 aa16.36■□□□□ 0.21
UFD1-203ENST00000421968 SLC51AQ86UW1 340 aa16.36■□□□□ 0.21
UFD1-203ENST00000421968 ZNF496Q96IT1 587 aaPredicted RBP16.36■□□□□ 0.21
UFD1-203ENST00000421968 COL6A3P12111 3177 aa16.36■□□□□ 0.21
UFD1-203ENST00000421968 RAD17O75943 681 aa16.35■□□□□ 0.21
UFD1-203ENST00000421968 TNIP1Q15025 636 aa16.35■□□□□ 0.21
UFD1-203ENST00000421968 CRY2Q49AN0 593 aa16.35■□□□□ 0.21
UFD1-203ENST00000421968 NOM1Q5C9Z4 860 aaKnown RBP16.35■□□□□ 0.21
UFD1-203ENST00000421968 CHRDL2Q6WN34 429 aa16.35■□□□□ 0.21
UFD1-203ENST00000421968 RPGRQ92834 1020 aaKnown RBP16.35■□□□□ 0.21
UFD1-203ENST00000421968 DCPSQ96C86 337 aaKnown RBP16.35■□□□□ 0.21
UFD1-203ENST00000421968 HEG1Q9ULI3 1381 aa16.35■□□□□ 0.21
UFD1-203ENST00000421968 RBBP6Q7Z6E9 1792 aaKnown RBP16.34■□□□□ 0.21
UFD1-203ENST00000421968 MICALL2Q8IY33 904 aa16.34■□□□□ 0.21
UFD1-203ENST00000421968 VPS33BQ9H267 617 aa16.34■□□□□ 0.21
UFD1-203ENST00000421968 PPEF1O14829 653 aaPredicted RBP16.33■□□□□ 0.2
UFD1-203ENST00000421968 SAMD7Q7Z3H4 446 aa16.33■□□□□ 0.2
UFD1-203ENST00000421968 TBC1D10BQ4KMP7 808 aaPredicted RBP16.32■□□□□ 0.2
UFD1-203ENST00000421968 CDCA8Q53HL2 280 aa16.32■□□□□ 0.2
UFD1-203ENST00000421968 TMX4Q9H1E5 349 aaPredicted RBP16.32■□□□□ 0.2
UFD1-203ENST00000421968 RBM27Q9P2N5 1060 aaKnown RBP16.32■□□□□ 0.2
UFD1-203ENST00000421968 TRIM17Q9Y577 477 aa16.32■□□□□ 0.2
UFD1-203ENST00000421968 PIP4K2AP48426 406 aaPredicted RBP16.31■□□□□ 0.2
UFD1-203ENST00000421968 HOXA10P31260 410 aaPredicted RBP16.3■□□□□ 0.2
UFD1-203ENST00000421968 ZNF790Q6PG37 636 aa16.3■□□□□ 0.2
UFD1-203ENST00000421968 SUPT20HQ8NEM7 779 aa16.3■□□□□ 0.2
UFD1-203ENST00000421968 RBM26Q5T8P6 1007 aaKnown RBP16.29■□□□□ 0.2
UFD1-203ENST00000421968 NUTM1Q86Y26 1132 aa16.29■□□□□ 0.2
UFD1-203ENST00000421968 SULF1Q8IWU6 871 aa16.29■□□□□ 0.2
UFD1-203ENST00000421968 RBM17Q96I25 401 aaKnown RBP16.29■□□□□ 0.2
UFD1-203ENST00000421968 ABCC12Q96J65 1359 aa16.28■□□□□ 0.2
UFD1-203ENST00000421968 EGFRP00533 1210 aa16.28■□□□□ 0.2
UFD1-203ENST00000421968 TM4SF4P48230 202 aa16.28■□□□□ 0.2
UFD1-203ENST00000421968 OTOP1Q7RTM1 612 aa16.28■□□□□ 0.2
UFD1-203ENST00000421968 CDCA5Q96FF9 252 aa16.28■□□□□ 0.2
UFD1-203ENST00000421968 FMNL2Q96PY5 1086 aa16.28■□□□□ 0.2
UFD1-203ENST00000421968 CRAMP1Q96RY5 1269 aa16.28■□□□□ 0.2
UFD1-203ENST00000421968 TMEM106CQ9BVX2 250 aa16.28■□□□□ 0.2
UFD1-203ENST00000421968 R3HDMLQ9H3Y0 253 aa16.28■□□□□ 0.2
UFD1-203ENST00000421968 ZBTB12Q9Y330 459 aaPredicted RBP16.28■□□□□ 0.2
UFD1-203ENST00000421968 HTTP42858 3142 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms