RNA–Protein interactions for RNA: ENST00000421816.6

GCDH-202, Transcript of glutaryl-CoA dehydrogenase, humanhuman

TSL 2

Gene GCDH, Length 1,109 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCDH-202ENST00000421816 ERFEQ4G0M1 354 aa24.71■■□□□ 1.55
GCDH-202ENST00000421816 NUTM1Q86Y26 1132 aa24.71■■□□□ 1.55
GCDH-202ENST00000421816 MYD88Q99836 296 aa24.71■■□□□ 1.55
GCDH-202ENST00000421816 PDZRN3Q9UPQ7 1066 aa24.71■■□□□ 1.55
GCDH-202ENST00000421816 TNRC6CQ9HCJ0 1690 aaKnown RBP24.71■■□□□ 1.55
GCDH-202ENST00000421816 ABCC12Q96J65 1359 aa24.7■■□□□ 1.55
GCDH-202ENST00000421816 KLRG2A4D1S0 409 aaPredicted RBP24.7■■□□□ 1.54
GCDH-202ENST00000421816 GTF2E1P29083 439 aaPredicted RBP24.7■■□□□ 1.54
GCDH-202ENST00000421816 C2CD5Q86YS7 1000 aa24.69■■□□□ 1.54
GCDH-202ENST00000421816 SLC10A5Q5PT55 438 aa24.68■■□□□ 1.54
GCDH-202ENST00000421816 CCDC191Q8NCU4 936 aa24.68■■□□□ 1.54
GCDH-202ENST00000421816 DNAAF4Q8WXU2 420 aa24.68■■□□□ 1.54
GCDH-202ENST00000421816 TRMT112Q9UI30 125 aaKnown RBP24.68■■□□□ 1.54
GCDH-202ENST00000421816 H0YIN7 160 aa24.67■■□□□ 1.54
GCDH-202ENST00000421816 IGKV5-2P06315 115 aa24.67■■□□□ 1.54
GCDH-202ENST00000421816 RARSP54136 660 aaKnown RBP24.67■■□□□ 1.54
GCDH-202ENST00000421816 BCL2L13Q9BXK5 485 aa24.67■■□□□ 1.54
GCDH-202ENST00000421816 BRPF1P55201 1214 aaPredicted RBP24.66■■□□□ 1.54
GCDH-202ENST00000421816 NEXNQ0ZGT2 675 aa24.66■■□□□ 1.54
GCDH-202ENST00000421816 SMC4Q9NTJ3 1288 aa24.66■■□□□ 1.54
GCDH-202ENST00000421816 PIM2Q9P1W9 311 aa24.66■■□□□ 1.54
GCDH-202ENST00000421816 DDX60Q8IY21 1712 aaKnown RBP24.66■■□□□ 1.54
GCDH-202ENST00000421816 SH3TC1Q8TE82 1336 aa24.65■■□□□ 1.54
GCDH-202ENST00000421816 SRGNP10124 158 aa24.65■■□□□ 1.54
GCDH-202ENST00000421816 YBX3P16989 372 aaKnown RBP eCLIP24.65■■□□□ 1.54
GCDH-202ENST00000421816 CWC25Q9NXE8 425 aaPredicted RBP24.65■■□□□ 1.54
GCDH-202ENST00000421816 ARFGEF1Q9Y6D6 1849 aa24.65■■□□□ 1.54
GCDH-202ENST00000421816 LAMB2P55268 1798 aa24.65■■□□□ 1.54
GCDH-202ENST00000421816 PTPRCP08575 1304 aa24.64■■□□□ 1.54
GCDH-202ENST00000421816 DCAF8L1A6NGE4 600 aa24.64■■□□□ 1.54
GCDH-202ENST00000421816 F6X3S4 739 aa24.64■■□□□ 1.54
GCDH-202ENST00000421816 GPR162Q16538 588 aa24.64■■□□□ 1.54
GCDH-202ENST00000421816 SYNE4Q8N205 404 aa24.64■■□□□ 1.54
GCDH-202ENST00000421816 NEURL1BA8MQ27 555 aa24.63■■□□□ 1.53
GCDH-202ENST00000421816 CRY2Q49AN0 593 aa24.63■■□□□ 1.53
GCDH-202ENST00000421816 PELP1Q8IZL8 1130 aaKnown RBP24.63■■□□□ 1.53
GCDH-202ENST00000421816 LINS1Q8NG48 757 aa24.63■■□□□ 1.53
GCDH-202ENST00000421816 WWC3Q9ULE0 1092 aa24.63■■□□□ 1.53
GCDH-202ENST00000421816 CWF19L2Q2TBE0 894 aaKnown RBP24.62■■□□□ 1.53
GCDH-202ENST00000421816 STYK1Q6J9G0 422 aa24.62■■□□□ 1.53
GCDH-202ENST00000421816 ZBTB38Q8NAP3 1195 aaPredicted RBP24.62■■□□□ 1.53
GCDH-202ENST00000421816 FAM89AQ96GI7 184 aa24.62■■□□□ 1.53
GCDH-202ENST00000421816 MASTLQ96GX5 879 aa24.62■■□□□ 1.53
GCDH-202ENST00000421816 PCCAP05165 728 aaPredicted RBP24.61■■□□□ 1.53
GCDH-202ENST00000421816 DALRD3Q5D0E6 543 aaKnown RBP24.61■■□□□ 1.53
GCDH-202ENST00000421816 BEND3Q5T5X7 828 aa24.61■■□□□ 1.53
GCDH-202ENST00000421816 NPR1P16066 1061 aa24.6■■□□□ 1.53
GCDH-202ENST00000421816 C3orf67Q6ZVT6 689 aa24.6■■□□□ 1.53
GCDH-202ENST00000421816 TTLL6Q8N841 843 aa24.6■■□□□ 1.53
GCDH-202ENST00000421816 NLRP3Q96P20 1036 aa24.6■■□□□ 1.53
GCDH-202ENST00000421816 BCS1LQ9Y276 419 aa24.6■■□□□ 1.53
GCDH-202ENST00000421816 CACNA1SQ13698 1873 aa24.6■■□□□ 1.53
GCDH-202ENST00000421816 HCLS1P14317 486 aaPredicted RBP24.59■■□□□ 1.53
GCDH-202ENST00000421816 ZNF622Q969S3 477 aaKnown RBP eCLIP24.59■■□□□ 1.53
GCDH-202ENST00000421816 GRIN3BO60391 1043 aa24.58■■□□□ 1.53
GCDH-202ENST00000421816 GCKRQ14397 625 aa24.58■■□□□ 1.53
GCDH-202ENST00000421816 CNKSR1Q969H4 720 aa24.58■■□□□ 1.53
GCDH-202ENST00000421816 NOB1Q9ULX3 412 aaKnown RBP24.58■■□□□ 1.53
GCDH-202ENST00000421816 SLX4Q8IY92 1834 aa24.57■■□□□ 1.52
GCDH-202ENST00000421816 IRS4O14654 1257 aaPredicted RBP24.57■■□□□ 1.52
GCDH-202ENST00000421816 HOXA10P31260 410 aaPredicted RBP24.57■■□□□ 1.52
GCDH-202ENST00000421816 RTL5Q5HYW3 569 aaPredicted RBP24.57■■□□□ 1.52
GCDH-202ENST00000421816 KIF16BQ96L93 1317 aa24.57■■□□□ 1.52
GCDH-202ENST00000421816 CDHR2Q9BYE9 1310 aa24.57■■□□□ 1.52
GCDH-202ENST00000421816 H7C1W4 665 aa24.56■■□□□ 1.52
GCDH-202ENST00000421816 BCAR3O75815 825 aa24.55■■□□□ 1.52
GCDH-202ENST00000421816 ALDH1L1O75891 902 aa24.55■■□□□ 1.52
GCDH-202ENST00000421816 SLC4A10Q6U841 1118 aa24.55■■□□□ 1.52
GCDH-202ENST00000421816 ARHGAP45Q92619 1136 aa24.55■■□□□ 1.52
GCDH-202ENST00000421816 JARID2Q92833 1246 aaPredicted RBP24.55■■□□□ 1.52
GCDH-202ENST00000421816 HSP90B1P14625 803 aaKnown RBP24.54■■□□□ 1.52
GCDH-202ENST00000421816 RPGRQ92834 1020 aaKnown RBP24.54■■□□□ 1.52
GCDH-202ENST00000421816 SRCIN1Q9C0H9 1055 aa24.54■■□□□ 1.52
GCDH-202ENST00000421816 ALDH1B1P30837 517 aa24.53■■□□□ 1.52
GCDH-202ENST00000421816 CASP7P55210 303 aa24.53■■□□□ 1.52
GCDH-202ENST00000421816 SF3B3Q15393 1217 aaKnown RBP24.53■■□□□ 1.52
GCDH-202ENST00000421816 PRPF40BQ6NWY9 871 aaKnown RBP24.53■■□□□ 1.52
GCDH-202ENST00000421816 RBM17Q96I25 401 aaKnown RBP24.53■■□□□ 1.52
GCDH-202ENST00000421816 YTHDC1Q96MU7 727 aaKnown RBP24.53■■□□□ 1.52
GCDH-202ENST00000421816 CRAMP1Q96RY5 1269 aa24.53■■□□□ 1.52
GCDH-202ENST00000421816 API5Q9BZZ5 524 aaKnown RBP24.53■■□□□ 1.52
GCDH-202ENST00000421816 MYH3P11055 1940 aa24.53■■□□□ 1.52
GCDH-202ENST00000421816 UBE3BQ7Z3V4 1068 aa24.52■■□□□ 1.52
GCDH-202ENST00000421816 PDE8AO60658 829 aa24.51■■□□□ 1.51
GCDH-202ENST00000421816 GOLGB1Q14789 3259 aaKnown RBP24.51■■□□□ 1.51
GCDH-202ENST00000421816 CHD4Q14839 1912 aa24.51■■□□□ 1.51
GCDH-202ENST00000421816 C7orf43Q8WVR3 580 aa24.5■■□□□ 1.51
GCDH-202ENST00000421816 IPO8O15397 1037 aaKnown RBP24.49■■□□□ 1.51
GCDH-202ENST00000421816 PLA2G12BQ9BX93 195 aa24.49■■□□□ 1.51
GCDH-202ENST00000421816 TAF1P21675 1872 aa24.49■■□□□ 1.51
GCDH-202ENST00000421816 GRM8O00222 908 aa24.48■■□□□ 1.51
GCDH-202ENST00000421816 ABCC4O15439 1325 aa24.48■■□□□ 1.51
GCDH-202ENST00000421816 C21orf2O43822 256 aa24.48■■□□□ 1.51
GCDH-202ENST00000421816 FER1L6Q2WGJ9 1857 aa24.47■■□□□ 1.51
GCDH-202ENST00000421816 UTYO14607 1347 aa24.47■■□□□ 1.51
GCDH-202ENST00000421816 ARHGAP27Q6ZUM4 889 aa24.47■■□□□ 1.51
GCDH-202ENST00000421816 DDX46Q7L014 1031 aaKnown RBP24.47■■□□□ 1.51
GCDH-202ENST00000421816 TRIM27P14373 513 aa24.46■■□□□ 1.51
GCDH-202ENST00000421816 CCT4P50991 539 aaKnown RBP24.46■■□□□ 1.51
GCDH-202ENST00000421816 CTSWP56202 376 aa24.46■■□□□ 1.51
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms