RNA–Protein interactions for RNA: ENST00000421722.5

PMS1-208, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2

Gene PMS1, Length 2,285 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-208ENST00000421722 KNSTRNQ9Y448 316 aa8.98□□□□□ -0.97
PMS1-208ENST00000421722 CEMIPQ8WUJ3 1361 aa8.98□□□□□ -0.97
PMS1-208ENST00000421722 NIM1KQ8IY84 436 aa8.98□□□□□ -0.97
PMS1-208ENST00000421722 CRAMP1Q96RY5 1269 aa8.98□□□□□ -0.97
PMS1-208ENST00000421722 TRAF5O00463 557 aa8.97□□□□□ -0.97
PMS1-208ENST00000421722 CELF2O95319 508 aaKnown RBP8.97□□□□□ -0.97
PMS1-208ENST00000421722 HMOX1P09601 288 aa8.97□□□□□ -0.97
PMS1-208ENST00000421722 LARGE2Q8N3Y3 721 aa8.97□□□□□ -0.97
PMS1-208ENST00000421722 SUPT20HQ8NEM7 779 aa8.97□□□□□ -0.97
PMS1-208ENST00000421722 GPRC5DQ9NZD1 345 aa8.97□□□□□ -0.97
PMS1-208ENST00000421722 TSKSQ9UJT2 592 aa8.97□□□□□ -0.97
PMS1-208ENST00000421722 NIP7Q9Y221 180 aaKnown RBP eCLIP8.97□□□□□ -0.97
PMS1-208ENST00000421722 COL4A5P29400 1685 aa8.97□□□□□ -0.97
PMS1-208ENST00000421722 SNRPA1P09661 255 aaKnown RBP8.97□□□□□ -0.97
PMS1-208ENST00000421722 GCC1Q96CN9 775 aa8.97□□□□□ -0.97
PMS1-208ENST00000421722 POLR3GLQ9BT43 218 aa8.97□□□□□ -0.97
PMS1-208ENST00000421722 FMR1Q06787 632 aaKnown RBP eCLIP8.96□□□□□ -0.97
PMS1-208ENST00000421722 OLFM4Q6UX06 510 aa8.96□□□□□ -0.97
PMS1-208ENST00000421722 REM2Q8IYK8 340 aaPredicted RBP8.96□□□□□ -0.97
PMS1-208ENST00000421722 RBM17Q96I25 401 aaKnown RBP8.96□□□□□ -0.97
PMS1-208ENST00000421722 ERVV-1B6SEH8 477 aa8.96□□□□□ -0.98
PMS1-208ENST00000421722 GRM1Q13255 1194 aa8.96□□□□□ -0.98
PMS1-208ENST00000421722 CIAPIN1Q6FI81 312 aa8.96□□□□□ -0.98
PMS1-208ENST00000421722 RPGRQ92834 1020 aaKnown RBP8.96□□□□□ -0.98
PMS1-208ENST00000421722 BTBD11A6QL63 1104 aa8.95□□□□□ -0.98
PMS1-208ENST00000421722 AMER1Q5JTC6 1135 aaPredicted RBP8.95□□□□□ -0.98
PMS1-208ENST00000421722 CDC37L1Q7L3B6 337 aa8.95□□□□□ -0.98
PMS1-208ENST00000421722 CCDC102AQ96A19 550 aa8.95□□□□□ -0.98
PMS1-208ENST00000421722 RTFDC1Q9BY42 306 aaPredicted RBP8.95□□□□□ -0.98
PMS1-208ENST00000421722 NPC1L1Q9UHC9 1359 aa8.95□□□□□ -0.98
PMS1-208ENST00000421722 GTF2E1P29083 439 aaPredicted RBP8.94□□□□□ -0.98
PMS1-208ENST00000421722 TMX4Q9H1E5 349 aaPredicted RBP8.94□□□□□ -0.98
PMS1-208ENST00000421722 ZNRF3Q9ULT6 936 aa8.94□□□□□ -0.98
PMS1-208ENST00000421722 USP16Q9Y5T5 823 aa8.94□□□□□ -0.98
PMS1-208ENST00000421722 COL3A1P02461 1466 aaPredicted RBP8.94□□□□□ -0.98
PMS1-208ENST00000421722 CASP8AP2Q9UKL3 1982 aa8.94□□□□□ -0.98
PMS1-208ENST00000421722 PPEF1O14829 653 aaPredicted RBP8.94□□□□□ -0.98
PMS1-208ENST00000421722 EIF4G2P78344 907 aaKnown RBP eCLIP8.94□□□□□ -0.98
PMS1-208ENST00000421722 TNIP1Q15025 636 aa8.94□□□□□ -0.98
PMS1-208ENST00000421722 PPIP5K2O43314 1243 aa8.93□□□□□ -0.98
PMS1-208ENST00000421722 PKN2Q16513 984 aaKnown RBP8.93□□□□□ -0.98
PMS1-208ENST00000421722 CTU1Q7Z7A3 348 aaKnown RBP8.93□□□□□ -0.98
PMS1-208ENST00000421722 GLIS2Q9BZE0 524 aaPredicted RBP8.93□□□□□ -0.98
PMS1-208ENST00000421722 LAMB4A4D0S4 1761 aa8.93□□□□□ -0.98
PMS1-208ENST00000421722 ABCC12Q96J65 1359 aa8.93□□□□□ -0.98
PMS1-208ENST00000421722 KCNQ3O43525 872 aa8.93□□□□□ -0.98
PMS1-208ENST00000421722 GMPSP49915 693 aaPredicted RBP8.93□□□□□ -0.98
PMS1-208ENST00000421722 CXCL9Q07325 125 aa8.93□□□□□ -0.98
PMS1-208ENST00000421722 RGMBQ6NW40 437 aa8.93□□□□□ -0.98
PMS1-208ENST00000421722 NBPF26B4DH59 902 aa8.92□□□□□ -0.98
PMS1-208ENST00000421722 HTATSF1O43719 755 aaKnown RBP8.92□□□□□ -0.98
PMS1-208ENST00000421722 NBPF10Q6P3W6 841 aaKnown RBP8.92□□□□□ -0.98
PMS1-208ENST00000421722 NBPF15Q8N660 670 aa8.92□□□□□ -0.98
PMS1-208ENST00000421722 ATP6V0A2Q9Y487 856 aa8.92□□□□□ -0.98
PMS1-208ENST00000421722 FAM155AB1AL88 458 aaPredicted RBP8.92□□□□□ -0.98
PMS1-208ENST00000421722 HSPA5P11021 654 aaKnown RBP8.92□□□□□ -0.98
PMS1-208ENST00000421722 SOX10P56693 466 aa8.92□□□□□ -0.98
PMS1-208ENST00000421722 HUNKP57058 714 aa8.92□□□□□ -0.98
PMS1-208ENST00000421722 HLFQ16534 295 aa8.92□□□□□ -0.98
PMS1-208ENST00000421722 C2orf69Q8N8R5 385 aa8.91□□□□□ -0.98
PMS1-208ENST00000421722 RNF186Q9NXI6 227 aa8.91□□□□□ -0.98
PMS1-208ENST00000421722 MAP3K15Q6ZN16 1313 aa8.91□□□□□ -0.98
PMS1-208ENST00000421722 CLSPNQ9HAW4 1339 aa8.91□□□□□ -0.98
PMS1-208ENST00000421722 H7C1D1 291 aa8.91□□□□□ -0.98
PMS1-208ENST00000421722 KIF23Q02241 960 aaPredicted RBP8.91□□□□□ -0.98
PMS1-208ENST00000421722 SLC10A5Q5PT55 438 aa8.91□□□□□ -0.98
PMS1-208ENST00000421722 SP8Q8IXZ3 490 aa8.91□□□□□ -0.98
PMS1-208ENST00000421722 DPF2Q92785 391 aa8.91□□□□□ -0.98
PMS1-208ENST00000421722 BCL2L13Q9BXK5 485 aa8.91□□□□□ -0.98
PMS1-208ENST00000421722 FAM177BA6PVY3 158 aa8.9□□□□□ -0.98
PMS1-208ENST00000421722 BBOX1O75936 387 aa8.9□□□□□ -0.98
PMS1-208ENST00000421722 HIRAP54198 1017 aaPredicted RBP8.9□□□□□ -0.98
PMS1-208ENST00000421722 KIAA2012Q0VF49 1180 aa8.9□□□□□ -0.98
PMS1-208ENST00000421722 AOC3Q16853 763 aa8.9□□□□□ -0.98
PMS1-208ENST00000421722 KIF6Q6ZMV9 814 aa8.9□□□□□ -0.98
PMS1-208ENST00000421722 TMC4Q7Z404 712 aa8.9□□□□□ -0.98
PMS1-208ENST00000421722 USP48Q86UV5 1035 aa8.9□□□□□ -0.98
PMS1-208ENST00000421722 GBA2Q9HCG7 927 aaPredicted RBP8.9□□□□□ -0.98
PMS1-208ENST00000421722 NUP98P52948 1817 aa8.9□□□□□ -0.98
PMS1-208ENST00000421722 SLC10A3P09131 477 aa8.89□□□□□ -0.99
PMS1-208ENST00000421722 PARP10Q53GL7 1025 aa8.89□□□□□ -0.99
PMS1-208ENST00000421722 NOM1Q5C9Z4 860 aaKnown RBP8.89□□□□□ -0.99
PMS1-208ENST00000421722 PPP1R42Q7Z4L9 355 aa8.89□□□□□ -0.99
PMS1-208ENST00000421722 ZNF34Q8IZ26 560 aa8.89□□□□□ -0.99
PMS1-208ENST00000421722 AKAP11Q9UKA4 1901 aa8.89□□□□□ -0.99
PMS1-208ENST00000421722 PIP4K2AP48426 406 aaPredicted RBP8.89□□□□□ -0.99
PMS1-208ENST00000421722 TRPM4Q8TD43 1214 aa8.89□□□□□ -0.99
PMS1-208ENST00000421722 PNISRQ8TF01 805 aaKnown RBP8.89□□□□□ -0.99
PMS1-208ENST00000421722 RTF1Q92541 710 aaKnown RBP8.89□□□□□ -0.99
PMS1-208ENST00000421722 NLRP3Q96P20 1036 aa8.89□□□□□ -0.99
PMS1-208ENST00000421722 ZIC5Q96T25 663 aa8.89□□□□□ -0.99
PMS1-208ENST00000421722 ZNF408Q9H9D4 720 aa8.89□□□□□ -0.99
PMS1-208ENST00000421722 CNOT7Q9UIV1 285 aaKnown RBP8.89□□□□□ -0.99
PMS1-208ENST00000421722 HPS5Q9UPZ3 1129 aa8.89□□□□□ -0.99
PMS1-208ENST00000421722 PRAMEF22A3QJZ6 481 aa8.88□□□□□ -0.99
PMS1-208ENST00000421722 U2SURPO15042 1029 aaKnown RBP8.88□□□□□ -0.99
PMS1-208ENST00000421722 NTSR2O95665 410 aa8.88□□□□□ -0.99
PMS1-208ENST00000421722 RPS12P25398 132 aaKnown RBP8.88□□□□□ -0.99
PMS1-208ENST00000421722 NUTM1Q86Y26 1132 aa8.88□□□□□ -0.99
PMS1-208ENST00000421722 ERBB4Q15303 1308 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms