RNA–Protein interactions for RNA: ENST00000421459.2

VIM-202, Transcript of vimentin, humanhuman

TSL 2

Gene VIM, Length 753 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-202ENST00000421459 EIF2S2P20042 333 aaKnown RBP10.73□□□□□ -0.69
VIM-202ENST00000421459 EPS15P42566 896 aa10.73□□□□□ -0.69
VIM-202ENST00000421459 PROSER3Q2NL68 480 aa10.73□□□□□ -0.69
VIM-202ENST00000421459 KIF6Q6ZMV9 814 aa10.73□□□□□ -0.69
VIM-202ENST00000421459 ZNF34Q8IZ26 560 aa10.73□□□□□ -0.69
VIM-202ENST00000421459 PNISRQ8TF01 805 aaKnown RBP10.73□□□□□ -0.69
VIM-202ENST00000421459 NECTIN2Q92692 538 aa10.73□□□□□ -0.69
VIM-202ENST00000421459 RPGRQ92834 1020 aaKnown RBP10.73□□□□□ -0.69
VIM-202ENST00000421459 NYXQ9GZU5 481 aa10.73□□□□□ -0.69
VIM-202ENST00000421459 ARFGEF2Q9Y6D5 1785 aa10.72□□□□□ -0.69
VIM-202ENST00000421459 RGL2O15211 777 aa10.72□□□□□ -0.69
VIM-202ENST00000421459 NTSR2O95665 410 aa10.72□□□□□ -0.69
VIM-202ENST00000421459 PDIA6Q15084 440 aa10.72□□□□□ -0.69
VIM-202ENST00000421459 GPC2Q8N158 579 aa10.72□□□□□ -0.69
VIM-202ENST00000421459 JDP2Q8WYK2 163 aa10.72□□□□□ -0.69
VIM-202ENST00000421459 PSMD1Q99460 953 aa10.72□□□□□ -0.69
VIM-202ENST00000421459 TRAF5O00463 557 aa10.71□□□□□ -0.69
VIM-202ENST00000421459 PPEF1O14829 653 aaPredicted RBP10.71□□□□□ -0.69
VIM-202ENST00000421459 NEFMP07197 916 aa10.71□□□□□ -0.69
VIM-202ENST00000421459 HOXA10P31260 410 aaPredicted RBP10.71□□□□□ -0.69
VIM-202ENST00000421459 SCNN1DP51172 638 aa10.71□□□□□ -0.69
VIM-202ENST00000421459 LRP10Q7Z4F1 713 aa10.71□□□□□ -0.69
VIM-202ENST00000421459 LARGE2Q8N3Y3 721 aa10.71□□□□□ -0.69
VIM-202ENST00000421459 RBM17Q96I25 401 aaKnown RBP10.71□□□□□ -0.69
VIM-202ENST00000421459 TSPYL4Q9UJ04 414 aa10.71□□□□□ -0.69
VIM-202ENST00000421459 LBX1P52954 281 aa10.7□□□□□ -0.7
VIM-202ENST00000421459 EIF6P56537 245 aaKnown RBP10.7□□□□□ -0.7
VIM-202ENST00000421459 AOC3Q16853 763 aa10.7□□□□□ -0.7
VIM-202ENST00000421459 KRT24Q2M2I5 525 aa10.7□□□□□ -0.7
VIM-202ENST00000421459 DEFB115Q30KQ5 88 aa10.7□□□□□ -0.7
VIM-202ENST00000421459 GIGYF2Q6Y7W6 1299 aaKnown RBP10.7□□□□□ -0.7
VIM-202ENST00000421459 PNMA8AQ86V59 439 aaPredicted RBP10.7□□□□□ -0.7
VIM-202ENST00000421459 WBP1LQ9NX94 342 aa10.7□□□□□ -0.7
VIM-202ENST00000421459 LTBP1Q14766 1721 aa10.7□□□□□ -0.7
VIM-202ENST00000421459 RASSF10A6NK89 507 aa10.69□□□□□ -0.7
VIM-202ENST00000421459 HCLS1P14317 486 aaPredicted RBP10.69□□□□□ -0.7
VIM-202ENST00000421459 RIPK4P57078 832 aa10.69□□□□□ -0.7
VIM-202ENST00000421459 AIMP1Q12904 312 aaKnown RBP10.69□□□□□ -0.7
VIM-202ENST00000421459 GRM1Q13255 1194 aa10.69□□□□□ -0.7
VIM-202ENST00000421459 CRAMP1Q96RY5 1269 aa10.69□□□□□ -0.7
VIM-202ENST00000421459 DDX21Q9NR30 783 aaKnown RBP eCLIP10.69□□□□□ -0.7
VIM-202ENST00000421459 ABT1Q9ULW3 272 aaKnown RBP10.69□□□□□ -0.7
VIM-202ENST00000421459 ADAMTSL1Q8N6G6 1762 aa10.69□□□□□ -0.7
VIM-202ENST00000421459 KDM3BQ7LBC6 1761 aa10.68□□□□□ -0.7
VIM-202ENST00000421459 WDR33Q9C0J8 1336 aaKnown RBP10.68□□□□□ -0.7
VIM-202ENST00000421459 MAPK8IP3Q9UPT6 1336 aa10.68□□□□□ -0.7
VIM-202ENST00000421459 PPIP5K2O43314 1243 aa10.68□□□□□ -0.7
VIM-202ENST00000421459 CTCFP49711 727 aaPredicted RBP10.68□□□□□ -0.7
VIM-202ENST00000421459 CST9Q5W186 159 aa10.68□□□□□ -0.7
VIM-202ENST00000421459 CC2D2BQ6DHV5 1058 aa10.68□□□□□ -0.7
VIM-202ENST00000421459 CCDC146Q8IYE0 955 aa10.68□□□□□ -0.7
VIM-202ENST00000421459 XAGE3Q8WTP9 111 aa10.68□□□□□ -0.7
VIM-202ENST00000421459 AIDAQ96BJ3 306 aa10.68□□□□□ -0.7
VIM-202ENST00000421459 NLRP3Q96P20 1036 aa10.68□□□□□ -0.7
VIM-202ENST00000421459 UTP14AQ9BVJ6 771 aaKnown RBP10.68□□□□□ -0.7
VIM-202ENST00000421459 SCN4AP35499 1836 aa10.68□□□□□ -0.7
VIM-202ENST00000421459 ABCC4O15439 1325 aa10.67□□□□□ -0.7
VIM-202ENST00000421459 HSPA8P11142 646 aaKnown RBP10.67□□□□□ -0.7
VIM-202ENST00000421459 LMOD1P29536 600 aaPredicted RBP10.67□□□□□ -0.7
VIM-202ENST00000421459 CXCL9Q07325 125 aa10.67□□□□□ -0.7
VIM-202ENST00000421459 NEUROD2Q15784 382 aa10.67□□□□□ -0.7
VIM-202ENST00000421459 CYP4F22Q6NT55 531 aa10.67□□□□□ -0.7
VIM-202ENST00000421459 PAXIP1Q6ZW49 1069 aaPredicted RBP10.67□□□□□ -0.7
VIM-202ENST00000421459 COPS6Q7L5N1 327 aa10.67□□□□□ -0.7
VIM-202ENST00000421459 PPP1R42Q7Z4L9 355 aa10.67□□□□□ -0.7
VIM-202ENST00000421459 NIM1KQ8IY84 436 aa10.67□□□□□ -0.7
VIM-202ENST00000421459 PRDM10Q9NQV6 1147 aa10.67□□□□□ -0.7
VIM-202ENST00000421459 ATP6V0A2Q9Y487 856 aa10.67□□□□□ -0.7
VIM-202ENST00000421459 LAMB4A4D0S4 1761 aa10.67□□□□□ -0.7
VIM-202ENST00000421459 RIC1Q4ADV7 1423 aa10.67□□□□□ -0.7
VIM-202ENST00000421459 SHTN1A0MZ66 631 aa10.66□□□□□ -0.7
VIM-202ENST00000421459 AOC2O75106 756 aa10.66□□□□□ -0.7
VIM-202ENST00000421459 RAD17O75943 681 aa10.66□□□□□ -0.7
VIM-202ENST00000421459 TMPOP42166 694 aaKnown RBP10.66□□□□□ -0.7
VIM-202ENST00000421459 GMPSP49915 693 aaPredicted RBP10.66□□□□□ -0.7
VIM-202ENST00000421459 PARP10Q53GL7 1025 aa10.66□□□□□ -0.7
VIM-202ENST00000421459 SLC10A5Q5PT55 438 aa10.66□□□□□ -0.7
VIM-202ENST00000421459 DLK2Q6UY11 383 aa10.66□□□□□ -0.7
VIM-202ENST00000421459 NLRP10Q86W26 655 aa10.66□□□□□ -0.7
VIM-202ENST00000421459 TSKSQ9UJT2 592 aa10.66□□□□□ -0.7
VIM-202ENST00000421459 LAS1LQ9Y4W2 734 aaKnown RBP10.66□□□□□ -0.7
VIM-202ENST00000421459 DLG5Q8TDM6 1919 aa10.66□□□□□ -0.7
VIM-202ENST00000421459 IBTKQ9P2D0 1353 aaPredicted RBP10.65□□□□□ -0.7
VIM-202ENST00000421459 NUP98P52948 1817 aa10.65□□□□□ -0.7
VIM-202ENST00000421459 USP50Q70EL3 339 aaPredicted RBP10.65□□□□□ -0.7
VIM-202ENST00000421459 CAPNS2Q96L46 248 aa10.65□□□□□ -0.7
VIM-202ENST00000421459 GLIS2Q9BZE0 524 aaPredicted RBP10.65□□□□□ -0.7
VIM-202ENST00000421459 GPRC5DQ9NZD1 345 aa10.65□□□□□ -0.7
VIM-202ENST00000421459 TRMT112Q9UI30 125 aaKnown RBP10.65□□□□□ -0.7
VIM-202ENST00000421459 ERBB4Q15303 1308 aa10.64□□□□□ -0.71
VIM-202ENST00000421459 HIRAP54198 1017 aaPredicted RBP10.64□□□□□ -0.71
VIM-202ENST00000421459 DPP8Q6V1X1 898 aaPredicted RBP10.64□□□□□ -0.71
VIM-202ENST00000421459 GPR101Q96P66 508 aaPredicted RBP10.64□□□□□ -0.71
VIM-202ENST00000421459 RTFDC1Q9BY42 306 aaPredicted RBP10.64□□□□□ -0.71
VIM-202ENST00000421459 PNNQ9H307 717 aaKnown RBP10.64□□□□□ -0.71
VIM-202ENST00000421459 ZNRF3Q9ULT6 936 aa10.64□□□□□ -0.71
VIM-202ENST00000421459 YDJCA8MPS7 323 aa10.63□□□□□ -0.71
VIM-202ENST00000421459 ATP5J2-PTCD1G3V325 749 aa10.63□□□□□ -0.71
VIM-202ENST00000421459 TCIRG1Q13488 830 aa10.63□□□□□ -0.71
VIM-202ENST00000421459 GRIPAP1Q4V328 841 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 170.4 ms