RNA–Protein interactions for RNA: ENST00000421230.6

PPFIA3-202, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 2

Gene PPFIA3, Length 2,236 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-202ENST00000421230 GRM8O00222 908 aa22.31■■□□□ 1.16
PPFIA3-202ENST00000421230 EIF5P55010 431 aaKnown RBP22.31■■□□□ 1.16
PPFIA3-202ENST00000421230 JARID2Q92833 1246 aaPredicted RBP22.31■■□□□ 1.16
PPFIA3-202ENST00000421230 LY75O60449 1722 aa22.3■■□□□ 1.16
PPFIA3-202ENST00000421230 NUCB1Q02818 461 aa22.3■■□□□ 1.16
PPFIA3-202ENST00000421230 NAP1L5Q96NT1 182 aaPredicted RBP22.3■■□□□ 1.16
PPFIA3-202ENST00000421230 MAP3K15Q6ZN16 1313 aa22.3■■□□□ 1.16
PPFIA3-202ENST00000421230 RREB1Q92766 1687 aa22.3■■□□□ 1.16
PPFIA3-202ENST00000421230 HLFQ16534 295 aa22.3■■□□□ 1.16
PPFIA3-202ENST00000421230 DZIP3Q86Y13 1208 aaKnown RBP22.3■■□□□ 1.16
PPFIA3-202ENST00000421230 PNMA6EA0A0J9YXQ4 647 aa22.29■■□□□ 1.16
PPFIA3-202ENST00000421230 SMIM5Q71RC9 77 aa22.28■■□□□ 1.16
PPFIA3-202ENST00000421230 TNPO1Q92973 898 aaKnown RBP22.28■■□□□ 1.16
PPFIA3-202ENST00000421230 UTYO14607 1347 aa22.27■■□□□ 1.16
PPFIA3-202ENST00000421230 ATP8B2P98198 1209 aa22.27■■□□□ 1.16
PPFIA3-202ENST00000421230 TCIRG1Q13488 830 aa22.27■■□□□ 1.16
PPFIA3-202ENST00000421230 SUCLG2Q96I99 432 aa22.27■■□□□ 1.16
PPFIA3-202ENST00000421230 A0A087WZG4 1122 aa22.26■■□□□ 1.15
PPFIA3-202ENST00000421230 ESPNB1AK53 854 aa22.26■■□□□ 1.15
PPFIA3-202ENST00000421230 RAB3GAP1Q15042 981 aa22.26■■□□□ 1.15
PPFIA3-202ENST00000421230 GIGYF2Q6Y7W6 1299 aaKnown RBP22.26■■□□□ 1.15
PPFIA3-202ENST00000421230 KAZALD1Q96I82 304 aa22.26■■□□□ 1.15
PPFIA3-202ENST00000421230 LRRC4BQ9NT99 713 aa22.26■■□□□ 1.15
PPFIA3-202ENST00000421230 CWC25Q9NXE8 425 aaPredicted RBP22.26■■□□□ 1.15
PPFIA3-202ENST00000421230 UBE3BQ7Z3V4 1068 aa22.25■■□□□ 1.15
PPFIA3-202ENST00000421230 GCC1Q96CN9 775 aa22.25■■□□□ 1.15
PPFIA3-202ENST00000421230 DCTPP1Q9H773 170 aa22.25■■□□□ 1.15
PPFIA3-202ENST00000421230 CNTNAP4Q9C0A0 1308 aa22.25■■□□□ 1.15
PPFIA3-202ENST00000421230 HMMRO75330 724 aa22.25■■□□□ 1.15
PPFIA3-202ENST00000421230 PPP1R42Q7Z4L9 355 aa22.25■■□□□ 1.15
PPFIA3-202ENST00000421230 ISCA1Q9BUE6 129 aa22.25■■□□□ 1.15
PPFIA3-202ENST00000421230 TAF1LQ8IZX4 1826 aa22.24■■□□□ 1.15
PPFIA3-202ENST00000421230 GPTP24298 496 aa22.24■■□□□ 1.15
PPFIA3-202ENST00000421230 SKOR2Q2VWA4 1001 aaPredicted RBP22.24■■□□□ 1.15
PPFIA3-202ENST00000421230 KIF2CQ99661 725 aa22.24■■□□□ 1.15
PPFIA3-202ENST00000421230 COL15A1P39059 1388 aa22.24■■□□□ 1.15
PPFIA3-202ENST00000421230 NUP98P52948 1817 aa22.23■■□□□ 1.15
PPFIA3-202ENST00000421230 ANKRD45Q5TZF3 282 aa22.23■■□□□ 1.15
PPFIA3-202ENST00000421230 CCDC191Q8NCU4 936 aa22.23■■□□□ 1.15
PPFIA3-202ENST00000421230 GBP4Q96PP9 640 aa22.23■■□□□ 1.15
PPFIA3-202ENST00000421230 PTMSP20962 102 aa22.23■■□□□ 1.15
PPFIA3-202ENST00000421230 BMP2KLQ5H9B9 411 aa22.23■■□□□ 1.15
PPFIA3-202ENST00000421230 CHD1LQ86WJ1 897 aa22.23■■□□□ 1.15
PPFIA3-202ENST00000421230 GAS2L3Q86XJ1 694 aa22.23■■□□□ 1.15
PPFIA3-202ENST00000421230 BICC1Q9H694 974 aaKnown RBP22.23■■□□□ 1.15
PPFIA3-202ENST00000421230 IBTKQ9P2D0 1353 aaPredicted RBP22.23■■□□□ 1.15
PPFIA3-202ENST00000421230 ERVV-1B6SEH8 477 aa22.22■■□□□ 1.15
PPFIA3-202ENST00000421230 APBB1O00213 710 aa22.22■■□□□ 1.15
PPFIA3-202ENST00000421230 GNPATO15228 680 aa22.22■■□□□ 1.15
PPFIA3-202ENST00000421230 SRGAP3O43295 1099 aa22.22■■□□□ 1.15
PPFIA3-202ENST00000421230 RC3H1Q5TC82 1133 aaKnown RBP22.22■■□□□ 1.15
PPFIA3-202ENST00000421230 EPHA10Q5JZY3 1008 aa22.22■■□□□ 1.15
PPFIA3-202ENST00000421230 CASP7P55210 303 aa22.21■■□□□ 1.15
PPFIA3-202ENST00000421230 AMIGO3Q86WK7 504 aa22.21■■□□□ 1.15
PPFIA3-202ENST00000421230 LNPKQ9C0E8 428 aa22.21■■□□□ 1.15
PPFIA3-202ENST00000421230 H7C1W4 665 aa22.21■■□□□ 1.15
PPFIA3-202ENST00000421230 CAMTA2O94983 1202 aa22.21■■□□□ 1.15
PPFIA3-202ENST00000421230 HSP90AA1P07900 732 aaKnown RBP22.21■■□□□ 1.15
PPFIA3-202ENST00000421230 SSH3Q8TE77 659 aa22.21■■□□□ 1.15
PPFIA3-202ENST00000421230 HDAC5Q9UQL6 1122 aa22.21■■□□□ 1.15
PPFIA3-202ENST00000421230 EXOC6BQ9Y2D4 811 aa22.21■■□□□ 1.15
PPFIA3-202ENST00000421230 C4BP0C0L5 1744 aa22.19■■□□□ 1.14
PPFIA3-202ENST00000421230 RRP9O43818 475 aaKnown RBP22.19■■□□□ 1.14
PPFIA3-202ENST00000421230 RPS6KA4O75676 772 aa22.19■■□□□ 1.14
PPFIA3-202ENST00000421230 APBA3O96018 575 aa22.19■■□□□ 1.14
PPFIA3-202ENST00000421230 TRIM28Q13263 835 aaKnown RBP22.19■■□□□ 1.14
PPFIA3-202ENST00000421230 HSP90AB3PQ58FF7 597 aa22.19■■□□□ 1.14
PPFIA3-202ENST00000421230 POLA2Q14181 598 aa22.19■■□□□ 1.14
PPFIA3-202ENST00000421230 ANKRD36CQ5JPF3 1778 aa22.19■■□□□ 1.14
PPFIA3-202ENST00000421230 NLRP10Q86W26 655 aa22.18■■□□□ 1.14
PPFIA3-202ENST00000421230 PROM2Q8N271 834 aa22.18■■□□□ 1.14
PPFIA3-202ENST00000421230 MTX1Q13505 466 aa22.17■■□□□ 1.14
PPFIA3-202ENST00000421230 TXNRD1Q16881 649 aa22.17■■□□□ 1.14
PPFIA3-202ENST00000421230 FAM89AQ96GI7 184 aa22.17■■□□□ 1.14
PPFIA3-202ENST00000421230 RTCBQ9Y3I0 505 aaKnown RBP22.17■■□□□ 1.14
PPFIA3-202ENST00000421230 SMARCA5O60264 1052 aaPredicted RBP22.16■■□□□ 1.14
PPFIA3-202ENST00000421230 GLIPR1L2Q4G1C9 344 aa22.16■■□□□ 1.14
PPFIA3-202ENST00000421230 SLC27A3Q5K4L6 730 aa22.16■■□□□ 1.14
PPFIA3-202ENST00000421230 AK7Q96M32 723 aa22.16■■□□□ 1.14
PPFIA3-202ENST00000421230 UBN2Q6ZU65 1347 aa22.16■■□□□ 1.14
PPFIA3-202ENST00000421230 PHF14O94880 888 aa22.16■■□□□ 1.14
PPFIA3-202ENST00000421230 CLEC17AQ6ZS10 378 aa22.16■■□□□ 1.14
PPFIA3-202ENST00000421230 ZNF34Q8IZ26 560 aa22.16■■□□□ 1.14
PPFIA3-202ENST00000421230 SYNE4Q8N205 404 aa22.16■■□□□ 1.14
PPFIA3-202ENST00000421230 SURF6O75683 361 aaKnown RBP22.15■■□□□ 1.14
PPFIA3-202ENST00000421230 CD2BP2O95400 341 aaKnown RBP22.15■■□□□ 1.14
PPFIA3-202ENST00000421230 HSP90AA2PQ14568 343 aaPredicted RBP22.15■■□□□ 1.14
PPFIA3-202ENST00000421230 ILDR1Q86SU0 546 aaPredicted RBP22.15■■□□□ 1.14
PPFIA3-202ENST00000421230 TRIM44Q96DX7 344 aaPredicted RBP22.15■■□□□ 1.14
PPFIA3-202ENST00000421230 SRP68Q9UHB9 627 aaKnown RBP22.15■■□□□ 1.14
PPFIA3-202ENST00000421230 K7ELQ4 463 aaPredicted RBP22.14■■□□□ 1.14
PPFIA3-202ENST00000421230 PA2G4Q9UQ80 394 aaKnown RBP22.14■■□□□ 1.14
PPFIA3-202ENST00000421230 FAM177BA6PVY3 158 aa22.14■■□□□ 1.13
PPFIA3-202ENST00000421230 FOXO4P98177 505 aa22.14■■□□□ 1.13
PPFIA3-202ENST00000421230 ZBTB38Q8NAP3 1195 aaPredicted RBP22.14■■□□□ 1.13
PPFIA3-202ENST00000421230 ARHGEF1Q92888 912 aaKnown RBP22.14■■□□□ 1.13
PPFIA3-202ENST00000421230 BCORQ6W2J9 1755 aa22.13■■□□□ 1.13
PPFIA3-202ENST00000421230 PLSCR1O15162 318 aa22.13■■□□□ 1.13
PPFIA3-202ENST00000421230 PCCAP05165 728 aaPredicted RBP22.13■■□□□ 1.13
PPFIA3-202ENST00000421230 USPL1Q5W0Q7 1092 aa22.12■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms