RNA–Protein interactions for RNA: ENST00000420987.5

SEMA4D-207, Transcript of semaphorin 4D, humanhuman

TSL 5 BASIC

Gene SEMA4D, Length 4,275 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-207ENST00000420987 ANXA1P04083 346 aa11.09□□□□□ -0.63
SEMA4D-207ENST00000420987 DYDC1Q8WWB3 177 aa11.09□□□□□ -0.63
SEMA4D-207ENST00000420987 LARP6Q9BRS8 491 aaKnown RBP11.09□□□□□ -0.63
SEMA4D-207ENST00000420987 UPF3BQ9BZI7 483 aaKnown RBP11.09□□□□□ -0.63
SEMA4D-207ENST00000420987 ANTXR1Q9H6X2 564 aa11.09□□□□□ -0.63
SEMA4D-207ENST00000420987 USP21Q9UK80 565 aa11.09□□□□□ -0.63
SEMA4D-207ENST00000420987 KAT6BQ8WYB5 2073 aa11.09□□□□□ -0.63
SEMA4D-207ENST00000420987 PI4KAP2A4QPH2 592 aa11.09□□□□□ -0.63
SEMA4D-207ENST00000420987 HSP90AB4PQ58FF6 505 aa11.09□□□□□ -0.63
SEMA4D-207ENST00000420987 TSHZ3Q63HK5 1081 aa11.09□□□□□ -0.63
SEMA4D-207ENST00000420987 C16orf71Q8IYS4 520 aaPredicted RBP11.09□□□□□ -0.63
SEMA4D-207ENST00000420987 PI4KAP1Q8N8J0 262 aa11.09□□□□□ -0.63
SEMA4D-207ENST00000420987 VPS37CA5D8V6 355 aaPredicted RBP11.09□□□□□ -0.63
SEMA4D-207ENST00000420987 FIBPO43427 364 aa11.09□□□□□ -0.63
SEMA4D-207ENST00000420987 CHAMP1Q96JM3 812 aa11.09□□□□□ -0.63
SEMA4D-207ENST00000420987 ZNF830Q96NB3 372 aaPredicted RBP11.09□□□□□ -0.63
SEMA4D-207ENST00000420987 NOL10Q9BSC4 688 aaKnown RBP11.09□□□□□ -0.63
SEMA4D-207ENST00000420987 MAP4K4O95819 1239 aaPredicted RBP11.09□□□□□ -0.63
SEMA4D-207ENST00000420987 FAM177A1Q8N128 213 aaPredicted RBP11.08□□□□□ -0.64
SEMA4D-207ENST00000420987 JCADQ9P266 1359 aa11.08□□□□□ -0.64
SEMA4D-207ENST00000420987 SHPRHQ149N8 1683 aa11.08□□□□□ -0.64
SEMA4D-207ENST00000420987 KIAA0754O94854 1291 aa11.08□□□□□ -0.64
SEMA4D-207ENST00000420987 BRPF1P55201 1214 aaPredicted RBP11.08□□□□□ -0.64
SEMA4D-207ENST00000420987 RRP12Q5JTH9 1297 aaKnown RBP11.08□□□□□ -0.64
SEMA4D-207ENST00000420987 GTF2E1P29083 439 aaPredicted RBP11.08□□□□□ -0.64
SEMA4D-207ENST00000420987 CYP27B1O15528 508 aa11.07□□□□□ -0.64
SEMA4D-207ENST00000420987 KCNQ3O43525 872 aa11.07□□□□□ -0.64
SEMA4D-207ENST00000420987 PRIM1P49642 420 aaKnown RBP11.07□□□□□ -0.64
SEMA4D-207ENST00000420987 GPATCH3Q96I76 525 aa11.07□□□□□ -0.64
SEMA4D-207ENST00000420987 DDX21Q9NR30 783 aaKnown RBP eCLIP11.07□□□□□ -0.64
SEMA4D-207ENST00000420987 CRB1P82279 1406 aa11.07□□□□□ -0.64
SEMA4D-207ENST00000420987 FAM98CQ17RN3 349 aaKnown RBP11.07□□□□□ -0.64
SEMA4D-207ENST00000420987 ZSCAN23Q3MJ62 389 aa11.07□□□□□ -0.64
SEMA4D-207ENST00000420987 BICD2Q8TD16 824 aa11.07□□□□□ -0.64
SEMA4D-207ENST00000420987 ZNF496Q96IT1 587 aaPredicted RBP11.07□□□□□ -0.64
SEMA4D-207ENST00000420987 C16orf45Q96MC5 204 aaPredicted RBP11.07□□□□□ -0.64
SEMA4D-207ENST00000420987 RUFY1Q96T51 708 aa11.07□□□□□ -0.64
SEMA4D-207ENST00000420987 MAP3K2Q9Y2U5 619 aa11.07□□□□□ -0.64
SEMA4D-207ENST00000420987 THRAP3Q9Y2W1 955 aaKnown RBP11.07□□□□□ -0.64
SEMA4D-207ENST00000420987 ATP6V1DQ9Y5K8 247 aa11.07□□□□□ -0.64
SEMA4D-207ENST00000420987 GIGYF1O75420 1035 aaPredicted RBP11.07□□□□□ -0.64
SEMA4D-207ENST00000420987 MBD3O95983 291 aa11.07□□□□□ -0.64
SEMA4D-207ENST00000420987 ZGPATQ8N5A5 531 aaKnown RBP11.07□□□□□ -0.64
SEMA4D-207ENST00000420987 ACSBG1Q96GR2 724 aa11.07□□□□□ -0.64
SEMA4D-207ENST00000420987 NUCB1Q02818 461 aa11.06□□□□□ -0.64
SEMA4D-207ENST00000420987 G2E3Q7L622 706 aa11.06□□□□□ -0.64
SEMA4D-207ENST00000420987 SMARCC1Q92922 1105 aaPredicted RBP11.06□□□□□ -0.64
SEMA4D-207ENST00000420987 PXDNQ92626 1479 aa11.06□□□□□ -0.64
SEMA4D-207ENST00000420987 G3BP1Q13283 466 aaKnown RBP eCLIP11.06□□□□□ -0.64
SEMA4D-207ENST00000420987 RAB3GAP1Q15042 981 aa11.06□□□□□ -0.64
SEMA4D-207ENST00000420987 KSR2Q6VAB6 950 aa11.06□□□□□ -0.64
SEMA4D-207ENST00000420987 UNC5CLQ8IV45 518 aa11.06□□□□□ -0.64
SEMA4D-207ENST00000420987 EXOC6BQ9Y2D4 811 aa11.06□□□□□ -0.64
SEMA4D-207ENST00000420987 DTNBO60941 627 aa11.06□□□□□ -0.64
SEMA4D-207ENST00000420987 LMAN1P49257 510 aa11.06□□□□□ -0.64
SEMA4D-207ENST00000420987 SF3A1Q15459 793 aaKnown RBP11.06□□□□□ -0.64
SEMA4D-207ENST00000420987 TMCO3Q6UWJ1 677 aa11.06□□□□□ -0.64
SEMA4D-207ENST00000420987 ANKRD13DQ6ZTN6 518 aa11.06□□□□□ -0.64
SEMA4D-207ENST00000420987 KRT222Q8N1A0 295 aa11.06□□□□□ -0.64
SEMA4D-207ENST00000420987 TSC1Q92574 1164 aa11.06□□□□□ -0.64
SEMA4D-207ENST00000420987 SSR1P43307 286 aaKnown RBP11.06□□□□□ -0.64
SEMA4D-207ENST00000420987 HDAC1Q13547 482 aaPredicted RBP11.06□□□□□ -0.64
SEMA4D-207ENST00000420987 KLHL40Q2TBA0 621 aa11.06□□□□□ -0.64
SEMA4D-207ENST00000420987 BMP2KLQ5H9B9 411 aa11.06□□□□□ -0.64
SEMA4D-207ENST00000420987 COPS6Q7L5N1 327 aa11.06□□□□□ -0.64
SEMA4D-207ENST00000420987 XAGE3Q8WTP9 111 aa11.06□□□□□ -0.64
SEMA4D-207ENST00000420987 UBXN4Q92575 508 aa11.06□□□□□ -0.64
SEMA4D-207ENST00000420987 DRC1Q96MC2 740 aa11.06□□□□□ -0.64
SEMA4D-207ENST00000420987 NRKQ7Z2Y5 1582 aa11.06□□□□□ -0.64
SEMA4D-207ENST00000420987 SURF6O75683 361 aaKnown RBP11.05□□□□□ -0.64
SEMA4D-207ENST00000420987 CCDC102AQ96A19 550 aa11.05□□□□□ -0.64
SEMA4D-207ENST00000420987 MYD88Q99836 296 aa11.05□□□□□ -0.64
SEMA4D-207ENST00000420987 PHAXQ9H814 394 aaKnown RBP11.05□□□□□ -0.64
SEMA4D-207ENST00000420987 ZBTB40Q9NUA8 1239 aa11.05□□□□□ -0.64
SEMA4D-207ENST00000420987 PES1O00541 588 aaKnown RBP11.05□□□□□ -0.64
SEMA4D-207ENST00000420987 FOSBP53539 338 aa11.05□□□□□ -0.64
SEMA4D-207ENST00000420987 CNPY4Q8N129 248 aa11.05□□□□□ -0.64
SEMA4D-207ENST00000420987 STK11IPQ8N1F8 1099 aa11.05□□□□□ -0.64
SEMA4D-207ENST00000420987 RASSF4Q9H2L5 321 aa11.05□□□□□ -0.64
SEMA4D-207ENST00000420987 ERBB4Q15303 1308 aa11.05□□□□□ -0.64
SEMA4D-207ENST00000420987 SLIT3O75094 1523 aa11.05□□□□□ -0.64
SEMA4D-207ENST00000420987 CD2BP2O95400 341 aaKnown RBP11.05□□□□□ -0.64
SEMA4D-207ENST00000420987 SRRTQ9BXP5 876 aaKnown RBP11.04□□□□□ -0.64
SEMA4D-207ENST00000420987 USP25Q9UHP3 1055 aa11.04□□□□□ -0.64
SEMA4D-207ENST00000420987 NFAT5O94916 1531 aa11.04□□□□□ -0.64
SEMA4D-207ENST00000420987 MEIS3Q99687 375 aa11.04□□□□□ -0.64
SEMA4D-207ENST00000420987 FSD2A1L4K1 749 aa11.04□□□□□ -0.64
SEMA4D-207ENST00000420987 SRGAP3O43295 1099 aa11.04□□□□□ -0.64
SEMA4D-207ENST00000420987 ALDH1L1O75891 902 aa11.04□□□□□ -0.64
SEMA4D-207ENST00000420987 HMGB2P26583 209 aaKnown RBP11.04□□□□□ -0.64
SEMA4D-207ENST00000420987 FILIP1Q7Z7B0 1213 aa11.04□□□□□ -0.64
SEMA4D-207ENST00000420987 ZBTB12Q9Y330 459 aaPredicted RBP11.04□□□□□ -0.64
SEMA4D-207ENST00000420987 ERC2O15083 957 aa11.04□□□□□ -0.64
SEMA4D-207ENST00000420987 U2AF2P26368 475 aaKnown RBP eCLIP11.04□□□□□ -0.64
SEMA4D-207ENST00000420987 SMC5Q8IY18 1101 aa11.04□□□□□ -0.64
SEMA4D-207ENST00000420987 SPATA31A6Q5VVP1 1343 aa11.03□□□□□ -0.64
SEMA4D-207ENST00000420987 ZBTB7BO15156 539 aaPredicted RBP11.03□□□□□ -0.64
SEMA4D-207ENST00000420987 RBSNQ9H1K0 784 aa11.03□□□□□ -0.64
SEMA4D-207ENST00000420987 SMC3Q9UQE7 1217 aa11.03□□□□□ -0.64
SEMA4D-207ENST00000420987 ABCC4O15439 1325 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms