RNA–Protein interactions for RNA: ENST00000420869.2

TRIM49D1-201, Transcript of tripartite motif containing 49D1, humanhuman

APPRIS P2 TSL 5 BASIC

Gene TRIM49D1, Length 1,651 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM49D1-201ENST00000420869 NEURL1BA8MQ27 555 aa10.51□□□□□ -0.73
TRIM49D1-201ENST00000420869 HIP1O00291 1037 aa10.51□□□□□ -0.73
TRIM49D1-201ENST00000420869 IFIT2P09913 472 aaKnown RBP10.51□□□□□ -0.73
TRIM49D1-201ENST00000420869 NECTIN1Q15223 517 aa10.51□□□□□ -0.73
TRIM49D1-201ENST00000420869 VPS53Q5VIR6 699 aa10.51□□□□□ -0.73
TRIM49D1-201ENST00000420869 LARP1Q6PKG0 1096 aaKnown RBP10.51□□□□□ -0.73
TRIM49D1-201ENST00000420869 KIAA1211Q6ZU35 1233 aa10.51□□□□□ -0.73
TRIM49D1-201ENST00000420869 C19orf44Q9H6X5 657 aa10.51□□□□□ -0.73
TRIM49D1-201ENST00000420869 ZSWIM6Q9HCJ5 1215 aa10.51□□□□□ -0.73
TRIM49D1-201ENST00000420869 SPG7Q9UQ90 795 aa10.51□□□□□ -0.73
TRIM49D1-201ENST00000420869 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP10.51□□□□□ -0.73
TRIM49D1-201ENST00000420869 MYH6P13533 1939 aa10.51□□□□□ -0.73
TRIM49D1-201ENST00000420869 LAMB2P55268 1798 aa10.51□□□□□ -0.73
TRIM49D1-201ENST00000420869 SYCE3A1L190 88 aa10.5□□□□□ -0.73
TRIM49D1-201ENST00000420869 LARGE1O95461 756 aa10.5□□□□□ -0.73
TRIM49D1-201ENST00000420869 AACSQ86V21 672 aa10.5□□□□□ -0.73
TRIM49D1-201ENST00000420869 ZSCAN30Q86W11 494 aa10.5□□□□□ -0.73
TRIM49D1-201ENST00000420869 KLHL34Q8N239 644 aa10.5□□□□□ -0.73
TRIM49D1-201ENST00000420869 ANP32BQ92688 251 aaKnown RBP10.5□□□□□ -0.73
TRIM49D1-201ENST00000420869 EAF2Q96CJ1 260 aaPredicted RBP10.5□□□□□ -0.73
TRIM49D1-201ENST00000420869 METTL22Q9BUU2 404 aaPredicted RBP10.5□□□□□ -0.73
TRIM49D1-201ENST00000420869 PHLPP1O60346 1717 aa10.5□□□□□ -0.73
TRIM49D1-201ENST00000420869 ZSCAN22P10073 491 aaPredicted RBP10.5□□□□□ -0.73
TRIM49D1-201ENST00000420869 TATP17735 454 aaPredicted RBP10.5□□□□□ -0.73
TRIM49D1-201ENST00000420869 TRHP20396 242 aaPredicted RBP10.5□□□□□ -0.73
TRIM49D1-201ENST00000420869 CASTP20810 708 aaKnown RBP10.5□□□□□ -0.73
TRIM49D1-201ENST00000420869 ST3GAL1Q11201 340 aa10.5□□□□□ -0.73
TRIM49D1-201ENST00000420869 GCKRQ14397 625 aa10.5□□□□□ -0.73
TRIM49D1-201ENST00000420869 FOXD4L5Q5VV16 416 aaPredicted RBP10.5□□□□□ -0.73
TRIM49D1-201ENST00000420869 PROSER2Q86WR7 435 aaPredicted RBP10.5□□□□□ -0.73
TRIM49D1-201ENST00000420869 FOXD4L4Q8WXT5 416 aaPredicted RBP10.5□□□□□ -0.73
TRIM49D1-201ENST00000420869 RAPGEF4Q8WZA2 1011 aa10.5□□□□□ -0.73
TRIM49D1-201ENST00000420869 MAP4K1Q92918 833 aa10.5□□□□□ -0.73
TRIM49D1-201ENST00000420869 SYAP1Q96A49 352 aaPredicted RBP10.5□□□□□ -0.73
TRIM49D1-201ENST00000420869 ZSCAN31Q96LW9 406 aaPredicted RBP10.5□□□□□ -0.73
TRIM49D1-201ENST00000420869 SH2B1Q9NRF2 756 aaPredicted RBP10.5□□□□□ -0.73
TRIM49D1-201ENST00000420869 ZSCAN21Q9Y5A6 473 aaPredicted RBP10.5□□□□□ -0.73
TRIM49D1-201ENST00000420869 RFX5P48382 616 aaPredicted RBP10.49□□□□□ -0.73
TRIM49D1-201ENST00000420869 ADCK5Q3MIX3 580 aa10.49□□□□□ -0.73
TRIM49D1-201ENST00000420869 RABL6Q3YEC7 729 aaPredicted RBP10.49□□□□□ -0.73
TRIM49D1-201ENST00000420869 ALDH8A1Q9H2A2 487 aaPredicted RBP10.49□□□□□ -0.73
TRIM49D1-201ENST00000420869 COPRSQ9NQ92 184 aa10.49□□□□□ -0.73
TRIM49D1-201ENST00000420869 TMEM94Q12767 1356 aa10.49□□□□□ -0.73
TRIM49D1-201ENST00000420869 STX6O43752 255 aa10.48□□□□□ -0.73
TRIM49D1-201ENST00000420869 GADD45BO75293 160 aaPredicted RBP10.48□□□□□ -0.73
TRIM49D1-201ENST00000420869 F13A1P00488 732 aa10.48□□□□□ -0.73
TRIM49D1-201ENST00000420869 SYT1P21579 422 aa10.48□□□□□ -0.73
TRIM49D1-201ENST00000420869 G3BP1Q13283 466 aaKnown RBP eCLIP10.48□□□□□ -0.73
TRIM49D1-201ENST00000420869 NMIQ13287 307 aaPredicted RBP10.48□□□□□ -0.73
TRIM49D1-201ENST00000420869 SLC39A6Q13433 755 aa10.48□□□□□ -0.73
TRIM49D1-201ENST00000420869 USP48Q86UV5 1035 aa10.48□□□□□ -0.73
TRIM49D1-201ENST00000420869 IFNL2Q8IZJ0 200 aa10.48□□□□□ -0.73
TRIM49D1-201ENST00000420869 XAGE3Q8WTP9 111 aa10.48□□□□□ -0.73
TRIM49D1-201ENST00000420869 RBM8AQ9Y5S9 174 aaKnown RBP10.48□□□□□ -0.73
TRIM49D1-201ENST00000420869 TNS2Q63HR2 1409 aa10.47□□□□□ -0.73
TRIM49D1-201ENST00000420869 ZC3H6P61129 1189 aaKnown RBP10.47□□□□□ -0.73
TRIM49D1-201ENST00000420869 NEXNQ0ZGT2 675 aa10.47□□□□□ -0.73
TRIM49D1-201ENST00000420869 EPHA10Q5JZY3 1008 aa10.47□□□□□ -0.73
TRIM49D1-201ENST00000420869 CREB3L3Q68CJ9 461 aa10.47□□□□□ -0.73
TRIM49D1-201ENST00000420869 PRPF40BQ6NWY9 871 aaKnown RBP10.47□□□□□ -0.73
TRIM49D1-201ENST00000420869 LMOD2Q6P5Q4 547 aa10.47□□□□□ -0.73
TRIM49D1-201ENST00000420869 RIC3Q7Z5B4 369 aa10.47□□□□□ -0.73
TRIM49D1-201ENST00000420869 ZNF496Q96IT1 587 aaPredicted RBP10.47□□□□□ -0.73
TRIM49D1-201ENST00000420869 DCAF5Q96JK2 942 aa10.47□□□□□ -0.73
TRIM49D1-201ENST00000420869 JAKMIP1Q96N16 626 aaKnown RBP10.47□□□□□ -0.73
TRIM49D1-201ENST00000420869 TLR7Q9NYK1 1049 aaKnown RBP10.47□□□□□ -0.73
TRIM49D1-201ENST00000420869 KAT6BQ8WYB5 2073 aa10.47□□□□□ -0.73
TRIM49D1-201ENST00000420869 MYH2Q9UKX2 1941 aa10.47□□□□□ -0.73
TRIM49D1-201ENST00000420869 A0A0D9SFI3 127 aa10.47□□□□□ -0.73
TRIM49D1-201ENST00000420869 CYP27B1O15528 508 aa10.47□□□□□ -0.73
TRIM49D1-201ENST00000420869 PHF14O94880 888 aa10.47□□□□□ -0.73
TRIM49D1-201ENST00000420869 CPA1P15085 419 aa10.47□□□□□ -0.73
TRIM49D1-201ENST00000420869 CASP7P55210 303 aa10.47□□□□□ -0.73
TRIM49D1-201ENST00000420869 TSGA10IPQ3SY00 556 aa10.47□□□□□ -0.73
TRIM49D1-201ENST00000420869 FAM227BQ96M60 508 aa10.47□□□□□ -0.73
TRIM49D1-201ENST00000420869 TSPY26PQ9H489 355 aa10.47□□□□□ -0.73
TRIM49D1-201ENST00000420869 PDRG1Q9NUG6 133 aa10.47□□□□□ -0.73
TRIM49D1-201ENST00000420869 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.47□□□□□ -0.73
TRIM49D1-201ENST00000420869 NOL7Q9UMY1 257 aaKnown RBP10.47□□□□□ -0.73
TRIM49D1-201ENST00000420869 SMC3Q9UQE7 1217 aa10.47□□□□□ -0.73
TRIM49D1-201ENST00000420869 MTMR6Q9Y217 621 aa10.47□□□□□ -0.73
TRIM49D1-201ENST00000420869 CYP46A1Q9Y6A2 500 aa10.47□□□□□ -0.73
TRIM49D1-201ENST00000420869 LRP6O75581 1613 aa10.46□□□□□ -0.73
TRIM49D1-201ENST00000420869 COL5A2P05997 1499 aaPredicted RBP10.46□□□□□ -0.73
TRIM49D1-201ENST00000420869 ZNF609O15014 1411 aa10.46□□□□□ -0.73
TRIM49D1-201ENST00000420869 PALLDQ8WX93 1383 aa10.46□□□□□ -0.73
TRIM49D1-201ENST00000420869 SLC27A2O14975 620 aa10.46□□□□□ -0.74
TRIM49D1-201ENST00000420869 SNRPA1P09661 255 aaKnown RBP10.46□□□□□ -0.74
TRIM49D1-201ENST00000420869 AIMP1Q12904 312 aaKnown RBP10.46□□□□□ -0.74
TRIM49D1-201ENST00000420869 USPL1Q5W0Q7 1092 aa10.46□□□□□ -0.74
TRIM49D1-201ENST00000420869 COPS6Q7L5N1 327 aa10.46□□□□□ -0.74
TRIM49D1-201ENST00000420869 NFATC2IPQ8NCF5 419 aa10.46□□□□□ -0.74
TRIM49D1-201ENST00000420869 MYD88Q99836 296 aa10.46□□□□□ -0.74
TRIM49D1-201ENST00000420869 CCDC8Q9H0W5 538 aaPredicted RBP10.46□□□□□ -0.74
TRIM49D1-201ENST00000420869 CNPY2Q9Y2B0 182 aa10.46□□□□□ -0.74
TRIM49D1-201ENST00000420869 CICQ96RK0 1608 aaPredicted RBP10.46□□□□□ -0.74
TRIM49D1-201ENST00000420869 MYH13Q9UKX3 1938 aa10.46□□□□□ -0.74
TRIM49D1-201ENST00000420869 DOT1LQ8TEK3 1739 aa10.45□□□□□ -0.74
TRIM49D1-201ENST00000420869 SPATA31A3Q5VYP0 1347 aa10.45□□□□□ -0.74
TRIM49D1-201ENST00000420869 ZNF500O60304 480 aaPredicted RBP10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms