RNA–Protein interactions for RNA: ENST00000420401.5

ECHDC3-202, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 2

Gene ECHDC3, Length 854 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-202ENST00000420401 HSP90AB3PQ58FF7 597 aa23.42■■□□□ 1.34
ECHDC3-202ENST00000420401 C2CD5Q86YS7 1000 aa23.42■■□□□ 1.34
ECHDC3-202ENST00000420401 H0YIN7 160 aa23.41■■□□□ 1.34
ECHDC3-202ENST00000420401 PDE6BP35913 854 aa23.41■■□□□ 1.34
ECHDC3-202ENST00000420401 EXOSC9Q06265 439 aaKnown RBP23.41■■□□□ 1.34
ECHDC3-202ENST00000420401 ANKRD13DQ6ZTN6 518 aa23.41■■□□□ 1.34
ECHDC3-202ENST00000420401 STK31Q9BXU1 1019 aa23.41■■□□□ 1.34
ECHDC3-202ENST00000420401 NYXQ9GZU5 481 aa23.41■■□□□ 1.34
ECHDC3-202ENST00000420401 PDZRN3Q9UPQ7 1066 aa23.41■■□□□ 1.34
ECHDC3-202ENST00000420401 GTF2E1P29083 439 aaPredicted RBP23.4■■□□□ 1.34
ECHDC3-202ENST00000420401 DPY19L2Q6NUT2 758 aa23.4■■□□□ 1.34
ECHDC3-202ENST00000420401 ZNF34Q8IZ26 560 aa23.4■■□□□ 1.34
ECHDC3-202ENST00000420401 PLBD2Q8NHP8 589 aa23.4■■□□□ 1.34
ECHDC3-202ENST00000420401 FAM177BA6PVY3 158 aa23.39■■□□□ 1.33
ECHDC3-202ENST00000420401 GPTP24298 496 aa23.39■■□□□ 1.33
ECHDC3-202ENST00000420401 PARP10Q53GL7 1025 aa23.39■■□□□ 1.33
ECHDC3-202ENST00000420401 E9PSI1 815 aa23.38■■□□□ 1.33
ECHDC3-202ENST00000420401 CCDC24Q8N4L8 307 aa23.38■■□□□ 1.33
ECHDC3-202ENST00000420401 DICER1Q9UPY3 1922 aaKnown RBP23.37■■□□□ 1.33
ECHDC3-202ENST00000420401 VAMP4O75379 141 aa23.37■■□□□ 1.33
ECHDC3-202ENST00000420401 TCIRG1Q13488 830 aa23.37■■□□□ 1.33
ECHDC3-202ENST00000420401 PPP1R42Q7Z4L9 355 aa23.37■■□□□ 1.33
ECHDC3-202ENST00000420401 PHAXQ9H814 394 aaKnown RBP23.37■■□□□ 1.33
ECHDC3-202ENST00000420401 DDX58O95786 925 aaKnown RBP23.36■■□□□ 1.33
ECHDC3-202ENST00000420401 NUP98P52948 1817 aa23.36■■□□□ 1.33
ECHDC3-202ENST00000420401 UBN2Q6ZU65 1347 aa23.35■■□□□ 1.33
ECHDC3-202ENST00000420401 NFKBIEO00221 500 aa23.35■■□□□ 1.33
ECHDC3-202ENST00000420401 SUSD4Q5VX71 490 aa23.35■■□□□ 1.33
ECHDC3-202ENST00000420401 RIC3Q7Z5B4 369 aa23.35■■□□□ 1.33
ECHDC3-202ENST00000420401 ZNF622Q969S3 477 aaKnown RBP eCLIP23.35■■□□□ 1.33
ECHDC3-202ENST00000420401 IBTKQ9P2D0 1353 aaPredicted RBP23.35■■□□□ 1.33
ECHDC3-202ENST00000420401 TCERG1O14776 1098 aaKnown RBP23.34■■□□□ 1.33
ECHDC3-202ENST00000420401 SLC4A2P04920 1241 aa23.34■■□□□ 1.33
ECHDC3-202ENST00000420401 ZNF219Q9P2Y4 722 aaPredicted RBP23.34■■□□□ 1.33
ECHDC3-202ENST00000420401 SLFN5Q08AF3 891 aa23.33■■□□□ 1.33
ECHDC3-202ENST00000420401 UTP14AQ9BVJ6 771 aaKnown RBP23.33■■□□□ 1.33
ECHDC3-202ENST00000420401 ERFEQ4G0M1 354 aa23.32■■□□□ 1.32
ECHDC3-202ENST00000420401 NLRP10Q86W26 655 aa23.32■■□□□ 1.32
ECHDC3-202ENST00000420401 NUTM1Q86Y26 1132 aa23.32■■□□□ 1.32
ECHDC3-202ENST00000420401 FER1L6Q2WGJ9 1857 aa23.31■■□□□ 1.32
ECHDC3-202ENST00000420401 ANKRD31Q8N7Z5 1873 aa23.31■■□□□ 1.32
ECHDC3-202ENST00000420401 POTECB2RU33 542 aa23.31■■□□□ 1.32
ECHDC3-202ENST00000420401 NTSR2O95665 410 aa23.31■■□□□ 1.32
ECHDC3-202ENST00000420401 RNF123Q5XPI4 1314 aa23.31■■□□□ 1.32
ECHDC3-202ENST00000420401 CACNA1SQ13698 1873 aa23.3■■□□□ 1.32
ECHDC3-202ENST00000420401 C21orf2O43822 256 aa23.3■■□□□ 1.32
ECHDC3-202ENST00000420401 MASTLQ96GX5 879 aa23.3■■□□□ 1.32
ECHDC3-202ENST00000420401 KLRG2A4D1S0 409 aaPredicted RBP23.29■■□□□ 1.32
ECHDC3-202ENST00000420401 SRGNP10124 158 aa23.29■■□□□ 1.32
ECHDC3-202ENST00000420401 STYK1Q6J9G0 422 aa23.29■■□□□ 1.32
ECHDC3-202ENST00000420401 KSR2Q6VAB6 950 aa23.29■■□□□ 1.32
ECHDC3-202ENST00000420401 CNKSR1Q969H4 720 aa23.29■■□□□ 1.32
ECHDC3-202ENST00000420401 CDCA7LQ96GN5 454 aa23.29■■□□□ 1.32
ECHDC3-202ENST00000420401 ISCA1Q9BUE6 129 aa23.29■■□□□ 1.32
ECHDC3-202ENST00000420401 ATP5J2-PTCD1G3V325 749 aa23.28■■□□□ 1.32
ECHDC3-202ENST00000420401 TRIM28Q13263 835 aaKnown RBP23.28■■□□□ 1.32
ECHDC3-202ENST00000420401 CHADLQ6NUI6 762 aa23.28■■□□□ 1.32
ECHDC3-202ENST00000420401 TRMT112Q9UI30 125 aaKnown RBP23.28■■□□□ 1.32
ECHDC3-202ENST00000420401 NPR1P16066 1061 aa23.27■■□□□ 1.32
ECHDC3-202ENST00000420401 SLC10A5Q5PT55 438 aa23.27■■□□□ 1.32
ECHDC3-202ENST00000420401 CREBZFQ9NS37 354 aa23.27■■□□□ 1.32
ECHDC3-202ENST00000420401 MKRN1Q9UHC7 482 aaKnown RBP23.27■■□□□ 1.32
ECHDC3-202ENST00000420401 MAP3K2Q9Y2U5 619 aa23.27■■□□□ 1.32
ECHDC3-202ENST00000420401 HNRNPUQ00839 825 aaKnown RBP eCLIP23.26■■□□□ 1.31
ECHDC3-202ENST00000420401 FLIIQ13045 1269 aa23.26■■□□□ 1.31
ECHDC3-202ENST00000420401 G2E3Q7L622 706 aa23.26■■□□□ 1.31
ECHDC3-202ENST00000420401 TRMT2AQ8IZ69 625 aaKnown RBP23.26■■□□□ 1.31
ECHDC3-202ENST00000420401 MYD88Q99836 296 aa23.26■■□□□ 1.31
ECHDC3-202ENST00000420401 METTL22Q9BUU2 404 aaPredicted RBP23.26■■□□□ 1.31
ECHDC3-202ENST00000420401 SH3TC1Q8TE82 1336 aa23.26■■□□□ 1.31
ECHDC3-202ENST00000420401 ABCC12Q96J65 1359 aa23.26■■□□□ 1.31
ECHDC3-202ENST00000420401 PI4KAP2A4QPH2 592 aa23.25■■□□□ 1.31
ECHDC3-202ENST00000420401 PI4KAP1Q8N8J0 262 aa23.25■■□□□ 1.31
ECHDC3-202ENST00000420401 NLRP3Q96P20 1036 aa23.25■■□□□ 1.31
ECHDC3-202ENST00000420401 TAOK3Q9H2K8 898 aa23.25■■□□□ 1.31
ECHDC3-202ENST00000420401 COL11A2P13942 1736 aaPredicted RBP23.25■■□□□ 1.31
ECHDC3-202ENST00000420401 RIC1Q4ADV7 1423 aa23.25■■□□□ 1.31
ECHDC3-202ENST00000420401 NEXNQ0ZGT2 675 aa23.24■■□□□ 1.31
ECHDC3-202ENST00000420401 FKBP5Q13451 457 aaPredicted RBP23.24■■□□□ 1.31
ECHDC3-202ENST00000420401 ANKRD36CQ5JPF3 1778 aa23.24■■□□□ 1.31
ECHDC3-202ENST00000420401 ALDH1B1P30837 517 aa23.23■■□□□ 1.31
ECHDC3-202ENST00000420401 CRY2Q49AN0 593 aa23.23■■□□□ 1.31
ECHDC3-202ENST00000420401 CCDC191Q8NCU4 936 aa23.23■■□□□ 1.31
ECHDC3-202ENST00000420401 RPGRQ92834 1020 aaKnown RBP23.23■■□□□ 1.31
ECHDC3-202ENST00000420401 ZNF428Q96B54 188 aa23.23■■□□□ 1.31
ECHDC3-202ENST00000420401 SLX4Q8IY92 1834 aa23.22■■□□□ 1.31
ECHDC3-202ENST00000420401 DDNO94850 711 aaPredicted RBP23.22■■□□□ 1.31
ECHDC3-202ENST00000420401 LTBP3Q9NS15 1303 aa23.22■■□□□ 1.31
ECHDC3-202ENST00000420401 CWC25Q9NXE8 425 aaPredicted RBP23.21■■□□□ 1.31
ECHDC3-202ENST00000420401 ARFGEF2Q9Y6D5 1785 aa23.21■■□□□ 1.31
ECHDC3-202ENST00000420401 CT47B1P0C2W7 299 aaPredicted RBP23.2■■□□□ 1.3
ECHDC3-202ENST00000420401 POTEIP0CG38 1075 aa23.2■■□□□ 1.3
ECHDC3-202ENST00000420401 POTEJP0CG39 1038 aa23.2■■□□□ 1.3
ECHDC3-202ENST00000420401 SOGA3Q5TF21 947 aa23.2■■□□□ 1.3
ECHDC3-202ENST00000420401 PRPF40BQ6NWY9 871 aaKnown RBP23.2■■□□□ 1.3
ECHDC3-202ENST00000420401 FAM89AQ96GI7 184 aa23.2■■□□□ 1.3
ECHDC3-202ENST00000420401 RBM17Q96I25 401 aaKnown RBP23.2■■□□□ 1.3
ECHDC3-202ENST00000420401 SCN4AP35499 1836 aa23.19■■□□□ 1.3
ECHDC3-202ENST00000420401 IQCA1LA6NCM1 817 aa23.19■■□□□ 1.3
ECHDC3-202ENST00000420401 HCLS1P14317 486 aaPredicted RBP23.19■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms