RNA–Protein interactions for RNA: ENST00000419799.5

NOD1-205, Transcript of nucleotide binding oligomerization domain containing 1, humanhuman

TSL 1 (best)

Gene NOD1, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOD1-205ENST00000419799 NBPF15Q8N660 670 aa18.28■□□□□ 0.52
NOD1-205ENST00000419799 BEGAINQ9BUH8 593 aa18.28■□□□□ 0.52
NOD1-205ENST00000419799 LMOD1P29536 600 aaPredicted RBP18.27■□□□□ 0.52
NOD1-205ENST00000419799 GRIPAP1Q4V328 841 aa18.27■□□□□ 0.52
NOD1-205ENST00000419799 CAPNS2Q96L46 248 aa18.27■□□□□ 0.52
NOD1-205ENST00000419799 FAM177BA6PVY3 158 aa18.26■□□□□ 0.51
NOD1-205ENST00000419799 GTF2E1P29083 439 aaPredicted RBP18.26■□□□□ 0.51
NOD1-205ENST00000419799 SCNN1DP51172 638 aa18.26■□□□□ 0.51
NOD1-205ENST00000419799 MLLT1Q03111 559 aaPredicted RBP18.26■□□□□ 0.51
NOD1-205ENST00000419799 GPR101Q96P66 508 aaPredicted RBP18.26■□□□□ 0.51
NOD1-205ENST00000419799 GJA3Q9Y6H8 435 aa18.26■□□□□ 0.51
NOD1-205ENST00000419799 LTBP1Q14766 1721 aa18.26■□□□□ 0.51
NOD1-205ENST00000419799 COL4A5P29400 1685 aa18.25■□□□□ 0.51
NOD1-205ENST00000419799 HLFQ16534 295 aa18.25■□□□□ 0.51
NOD1-205ENST00000419799 USP50Q70EL3 339 aaPredicted RBP18.25■□□□□ 0.51
NOD1-205ENST00000419799 NYXQ9GZU5 481 aa18.25■□□□□ 0.51
NOD1-205ENST00000419799 MYBBP1AQ9BQG0 1328 aaKnown RBP18.24■□□□□ 0.51
NOD1-205ENST00000419799 CCDC85CA6NKD9 419 aa18.24■□□□□ 0.51
NOD1-205ENST00000419799 EPS15P42566 896 aa18.24■□□□□ 0.51
NOD1-205ENST00000419799 CST9Q5W186 159 aa18.24■□□□□ 0.51
NOD1-205ENST00000419799 CYP4F22Q6NT55 531 aa18.24■□□□□ 0.51
NOD1-205ENST00000419799 TLL2Q9Y6L7 1015 aa18.24■□□□□ 0.51
NOD1-205ENST00000419799 ABCC12Q96J65 1359 aa18.23■□□□□ 0.51
NOD1-205ENST00000419799 NEFMP07197 916 aa18.23■□□□□ 0.51
NOD1-205ENST00000419799 HOXA10P31260 410 aaPredicted RBP18.23■□□□□ 0.51
NOD1-205ENST00000419799 MAP2K2P36507 400 aa18.23■□□□□ 0.51
NOD1-205ENST00000419799 FMR1Q06787 632 aaKnown RBP eCLIP18.23■□□□□ 0.51
NOD1-205ENST00000419799 DCTN1Q14203 1278 aa18.23■□□□□ 0.51
NOD1-205ENST00000419799 PAXIP1Q6ZW49 1069 aaPredicted RBP18.23■□□□□ 0.51
NOD1-205ENST00000419799 MCM10Q7L590 875 aa18.23■□□□□ 0.51
NOD1-205ENST00000419799 RTF1Q92541 710 aaKnown RBP18.23■□□□□ 0.51
NOD1-205ENST00000419799 RIC1Q4ADV7 1423 aa18.23■□□□□ 0.51
NOD1-205ENST00000419799 ZNF316A6NFI3 1004 aaPredicted RBP18.22■□□□□ 0.51
NOD1-205ENST00000419799 ERVV-1B6SEH8 477 aa18.22■□□□□ 0.51
NOD1-205ENST00000419799 LARGE2Q8N3Y3 721 aa18.22■□□□□ 0.51
NOD1-205ENST00000419799 IBTKQ9P2D0 1353 aaPredicted RBP18.21■□□□□ 0.51
NOD1-205ENST00000419799 RPGRQ92834 1020 aaKnown RBP18.21■□□□□ 0.51
NOD1-205ENST00000419799 TRPM7Q96QT4 1865 aa18.2■□□□□ 0.5
NOD1-205ENST00000419799 TRAF5O00463 557 aa18.2■□□□□ 0.5
NOD1-205ENST00000419799 HTATSF1O43719 755 aaKnown RBP18.2■□□□□ 0.5
NOD1-205ENST00000419799 NUTM1Q86Y26 1132 aa18.2■□□□□ 0.5
NOD1-205ENST00000419799 CRAMP1Q96RY5 1269 aa18.2■□□□□ 0.5
NOD1-205ENST00000419799 PRKRIP1Q9H875 184 aaPredicted RBP18.2■□□□□ 0.5
NOD1-205ENST00000419799 PCDH10Q9P2E7 1040 aa18.2■□□□□ 0.5
NOD1-205ENST00000419799 CA12O43570 354 aa18.19■□□□□ 0.5
NOD1-205ENST00000419799 GRM1Q13255 1194 aa18.19■□□□□ 0.5
NOD1-205ENST00000419799 NIM1KQ8IY84 436 aa18.19■□□□□ 0.5
NOD1-205ENST00000419799 HHIPL1Q96JK4 782 aa18.19■□□□□ 0.5
NOD1-205ENST00000419799 VPS33BQ9H267 617 aa18.19■□□□□ 0.5
NOD1-205ENST00000419799 ADARB2Q9NS39 739 aaKnown RBP18.19■□□□□ 0.5
NOD1-205ENST00000419799 MAPK8IP3Q9UPT6 1336 aa18.19■□□□□ 0.5
NOD1-205ENST00000419799 LAMB4A4D0S4 1761 aa18.18■□□□□ 0.5
NOD1-205ENST00000419799 TAF7Q15545 349 aaPredicted RBP18.18■□□□□ 0.5
NOD1-205ENST00000419799 SAPCD2Q86UD0 394 aa18.18■□□□□ 0.5
NOD1-205ENST00000419799 PLEKHF1Q96S99 279 aa18.18■□□□□ 0.5
NOD1-205ENST00000419799 GPRC5DQ9NZD1 345 aa18.18■□□□□ 0.5
NOD1-205ENST00000419799 MAP3K15Q6ZN16 1313 aa18.18■□□□□ 0.5
NOD1-205ENST00000419799 PPEF1O14829 653 aaPredicted RBP18.17■□□□□ 0.5
NOD1-205ENST00000419799 AOC2O75106 756 aa18.17■□□□□ 0.5
NOD1-205ENST00000419799 CCDC146Q8IYE0 955 aa18.17■□□□□ 0.5
NOD1-205ENST00000419799 RBM17Q96I25 401 aaKnown RBP18.17■□□□□ 0.5
NOD1-205ENST00000419799 WDR43Q15061 677 aaKnown RBP eCLIP18.16■□□□□ 0.5
NOD1-205ENST00000419799 TSKSQ9UJT2 592 aa18.16■□□□□ 0.5
NOD1-205ENST00000419799 UBN2Q6ZU65 1347 aa18.16■□□□□ 0.5
NOD1-205ENST00000419799 NUP98P52948 1817 aa18.15■□□□□ 0.5
NOD1-205ENST00000419799 PPIP5K2O43314 1243 aa18.15■□□□□ 0.5
NOD1-205ENST00000419799 BRPF1P55201 1214 aaPredicted RBP18.15■□□□□ 0.5
NOD1-205ENST00000419799 NFE2L2Q16236 605 aa18.15■□□□□ 0.5
NOD1-205ENST00000419799 KIF6Q6ZMV9 814 aa18.15■□□□□ 0.5
NOD1-205ENST00000419799 THUMPD2Q9BTF0 503 aaKnown RBP18.15■□□□□ 0.5
NOD1-205ENST00000419799 MCOLN1Q9GZU1 580 aa18.15■□□□□ 0.5
NOD1-205ENST00000419799 PNNQ9H307 717 aaKnown RBP18.15■□□□□ 0.5
NOD1-205ENST00000419799 PGAP2Q9UHJ9 254 aa18.15■□□□□ 0.5
NOD1-205ENST00000419799 CELF2O95319 508 aaKnown RBP18.14■□□□□ 0.49
NOD1-205ENST00000419799 SUSD4Q5VX71 490 aa18.14■□□□□ 0.49
NOD1-205ENST00000419799 NGEFQ8N5V2 710 aa18.14■□□□□ 0.49
NOD1-205ENST00000419799 MIS18AQ9NYP9 233 aa18.14■□□□□ 0.49
NOD1-205ENST00000419799 NTSR2O95665 410 aa18.13■□□□□ 0.49
NOD1-205ENST00000419799 CXCL9Q07325 125 aa18.13■□□□□ 0.49
NOD1-205ENST00000419799 AOC3Q16853 763 aa18.13■□□□□ 0.49
NOD1-205ENST00000419799 TTLL7Q6ZT98 887 aa18.13■□□□□ 0.49
NOD1-205ENST00000419799 SLC51AQ86UW1 340 aa18.13■□□□□ 0.49
NOD1-205ENST00000419799 ZNF34Q8IZ26 560 aa18.13■□□□□ 0.49
NOD1-205ENST00000419799 ZC3H15Q8WU90 426 aaKnown RBP18.13■□□□□ 0.49
NOD1-205ENST00000419799 TMX4Q9H1E5 349 aaPredicted RBP18.13■□□□□ 0.49
NOD1-205ENST00000419799 ZNRF3Q9ULT6 936 aa18.13■□□□□ 0.49
NOD1-205ENST00000419799 RRP7AQ9Y3A4 280 aaKnown RBP18.13■□□□□ 0.49
NOD1-205ENST00000419799 ATP6V0A2Q9Y487 856 aa18.13■□□□□ 0.49
NOD1-205ENST00000419799 CDHR2Q9BYE9 1310 aa18.13■□□□□ 0.49
NOD1-205ENST00000419799 TCERG1O14776 1098 aaKnown RBP18.12■□□□□ 0.49
NOD1-205ENST00000419799 GPTP24298 496 aa18.12■□□□□ 0.49
NOD1-205ENST00000419799 SUPT20HQ8NEM7 779 aa18.12■□□□□ 0.49
NOD1-205ENST00000419799 PNISRQ8TF01 805 aaKnown RBP18.12■□□□□ 0.49
NOD1-205ENST00000419799 RTFDC1Q9BY42 306 aaPredicted RBP18.12■□□□□ 0.49
NOD1-205ENST00000419799 NEUROD2Q15784 382 aa18.11■□□□□ 0.49
NOD1-205ENST00000419799 PPP1R42Q7Z4L9 355 aa18.11■□□□□ 0.49
NOD1-205ENST00000419799 NLRP3Q96P20 1036 aa18.11■□□□□ 0.49
NOD1-205ENST00000419799 GLIS2Q9BZE0 524 aaPredicted RBP18.11■□□□□ 0.49
NOD1-205ENST00000419799 GMPSP49915 693 aaPredicted RBP18.1■□□□□ 0.49
NOD1-205ENST00000419799 RIPK4P57078 832 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms