RNA–Protein interactions for RNA: ENST00000419533.1

UBR4-206, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 5,583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-206ENST00000419533 RNF41Q9H4P4 317 aaPredicted RBP9.92□□□□□ -0.82
UBR4-206ENST00000419533 CCDC39Q9UFE4 941 aa9.92□□□□□ -0.82
UBR4-206ENST00000419533 MINDY4BA8MYZ0 360 aa9.91□□□□□ -0.82
UBR4-206ENST00000419533 TTF1Q15361 905 aaPredicted RBP9.91□□□□□ -0.82
UBR4-206ENST00000419533 LUC7LQ9NQ29 371 aaKnown RBP9.91□□□□□ -0.82
UBR4-206ENST00000419533 MYO3AQ8NEV4 1616 aa9.91□□□□□ -0.82
UBR4-206ENST00000419533 KIAA0232Q92628 1395 aa9.91□□□□□ -0.82
UBR4-206ENST00000419533 FLIIQ13045 1269 aa9.91□□□□□ -0.82
UBR4-206ENST00000419533 FLAD1Q8NFF5 587 aa9.91□□□□□ -0.82
UBR4-206ENST00000419533 CAGE1Q8TC20 777 aa9.91□□□□□ -0.82
UBR4-206ENST00000419533 RARSP54136 660 aaKnown RBP9.91□□□□□ -0.82
UBR4-206ENST00000419533 TXLNBQ8N3L3 684 aa9.91□□□□□ -0.82
UBR4-206ENST00000419533 ARGLU1Q9NWB6 273 aaPredicted RBP9.91□□□□□ -0.82
UBR4-206ENST00000419533 RTCBQ9Y3I0 505 aaKnown RBP9.91□□□□□ -0.82
UBR4-206ENST00000419533 MRE11P49959 708 aa9.91□□□□□ -0.82
UBR4-206ENST00000419533 MAP3K2Q9Y2U5 619 aa9.91□□□□□ -0.82
UBR4-206ENST00000419533 SPTY2D1Q68D10 685 aaPredicted RBP9.9□□□□□ -0.82
UBR4-206ENST00000419533 SEPT12Q8IYM1 358 aa9.9□□□□□ -0.82
UBR4-206ENST00000419533 CARD10Q9BWT7 1032 aa9.9□□□□□ -0.82
UBR4-206ENST00000419533 BOLA2Q9H3K6 86 aa9.9□□□□□ -0.82
UBR4-206ENST00000419533 CCNL1Q9UK58 526 aaPredicted RBP9.9□□□□□ -0.82
UBR4-206ENST00000419533 SSBP05455 408 aaKnown RBP eCLIP9.9□□□□□ -0.82
UBR4-206ENST00000419533 BRPF1P55201 1214 aaPredicted RBP9.9□□□□□ -0.82
UBR4-206ENST00000419533 CAVIN1Q6NZI2 390 aaKnown RBP9.9□□□□□ -0.82
UBR4-206ENST00000419533 IQCA1Q86XH1 822 aa9.9□□□□□ -0.82
UBR4-206ENST00000419533 ZNF219Q9P2Y4 722 aaPredicted RBP9.9□□□□□ -0.82
UBR4-206ENST00000419533 SLIT1O75093 1534 aa9.9□□□□□ -0.82
UBR4-206ENST00000419533 HMGB1P09429 215 aaKnown RBP9.9□□□□□ -0.82
UBR4-206ENST00000419533 EIF4A2Q14240 407 aaKnown RBP9.9□□□□□ -0.82
UBR4-206ENST00000419533 NBPF6Q5VWK0 638 aa9.9□□□□□ -0.82
UBR4-206ENST00000419533 NBPF5PQ86XG9 351 aaPredicted RBP9.9□□□□□ -0.82
UBR4-206ENST00000419533 CTCFLQ8NI51 663 aaPredicted RBP9.9□□□□□ -0.82
UBR4-206ENST00000419533 ZNF622Q969S3 477 aaKnown RBP eCLIP9.9□□□□□ -0.829e-11■□□□□ 9.9
UBR4-206ENST00000419533 NBPF4Q96M43 638 aa9.9□□□□□ -0.82
UBR4-206ENST00000419533 LRRFIP2Q9Y608 721 aaKnown RBP9.9□□□□□ -0.82
UBR4-206ENST00000419533 CUL5Q93034 780 aa9.9□□□□□ -0.83
UBR4-206ENST00000419533 TANGO6Q9C0B7 1094 aa9.9□□□□□ -0.83
UBR4-206ENST00000419533 EHMT1Q9H9B1 1298 aa9.9□□□□□ -0.83
UBR4-206ENST00000419533 CDC42BPGQ6DT37 1551 aa9.9□□□□□ -0.83
UBR4-206ENST00000419533 CASTP20810 708 aaKnown RBP9.89□□□□□ -0.83
UBR4-206ENST00000419533 NASPP49321 788 aaPredicted RBP9.89□□□□□ -0.83
UBR4-206ENST00000419533 CCDC152Q4G0S7 254 aa9.89□□□□□ -0.83
UBR4-206ENST00000419533 CEP57L1Q8IYX8 460 aa9.89□□□□□ -0.83
UBR4-206ENST00000419533 TNMDQ9H2S6 317 aa9.89□□□□□ -0.83
UBR4-206ENST00000419533 PARP3Q9Y6F1 533 aa9.89□□□□□ -0.83
UBR4-206ENST00000419533 C3P01024 1663 aa9.89□□□□□ -0.83
UBR4-206ENST00000419533 USP6P35125 1406 aa9.89□□□□□ -0.83
UBR4-206ENST00000419533 F6X3S4 739 aa9.89□□□□□ -0.83
UBR4-206ENST00000419533 BAG3O95817 575 aa9.89□□□□□ -0.83
UBR4-206ENST00000419533 CCDC192P0DO97 292 aa9.89□□□□□ -0.83
UBR4-206ENST00000419533 TRIM21P19474 475 aaKnown RBP9.89□□□□□ -0.83
UBR4-206ENST00000419533 POLKQ9UBT6 870 aa9.89□□□□□ -0.83
UBR4-206ENST00000419533 IL16Q14005 1332 aa9.89□□□□□ -0.83
UBR4-206ENST00000419533 ADAMTS13Q76LX8 1427 aa9.89□□□□□ -0.83
UBR4-206ENST00000419533 SERPINC1P01008 464 aa9.89□□□□□ -0.83
UBR4-206ENST00000419533 LDHAL6AQ6ZMR3 332 aa9.89□□□□□ -0.83
UBR4-206ENST00000419533 SPATA32Q96LK8 384 aa9.89□□□□□ -0.83
UBR4-206ENST00000419533 RTL1A6NKG5 1358 aa9.89□□□□□ -0.83
UBR4-206ENST00000419533 TRAK2O60296 914 aa9.89□□□□□ -0.83
UBR4-206ENST00000419533 MATR3P43243 847 aaKnown RBP eCLIP9.89□□□□□ -0.83
UBR4-206ENST00000419533 SETQ01105 290 aaPredicted RBP9.89□□□□□ -0.83
UBR4-206ENST00000419533 TULP4Q9NRJ4 1543 aa9.89□□□□□ -0.83
UBR4-206ENST00000419533 CCDC96Q2M329 555 aa9.88□□□□□ -0.83
UBR4-206ENST00000419533 PAXIP1Q6ZW49 1069 aaPredicted RBP9.88□□□□□ -0.83
UBR4-206ENST00000419533 PIBF1Q8WXW3 757 aa9.88□□□□□ -0.83
UBR4-206ENST00000419533 PKNOX2Q96KN3 472 aa9.88□□□□□ -0.83
UBR4-206ENST00000419533 DNAI2Q9GZS0 605 aa9.88□□□□□ -0.83
UBR4-206ENST00000419533 MYO1BO43795 1136 aa9.88□□□□□ -0.83
UBR4-206ENST00000419533 PPP4R3AQ6IN85 833 aa9.88□□□□□ -0.83
UBR4-206ENST00000419533 MAP7D2Q96T17 732 aa9.88□□□□□ -0.83
UBR4-206ENST00000419533 ZNF213O14771 459 aa9.88□□□□□ -0.83
UBR4-206ENST00000419533 DESP17661 470 aa9.88□□□□□ -0.83
UBR4-206ENST00000419533 GSTO1P78417 241 aa9.88□□□□□ -0.83
UBR4-206ENST00000419533 PPFIBP1Q86W92 1011 aa9.88□□□□□ -0.83
UBR4-206ENST00000419533 RNF214Q8ND24 703 aa9.88□□□□□ -0.83
UBR4-206ENST00000419533 CCDC8Q9H0W5 538 aaPredicted RBP9.88□□□□□ -0.83
UBR4-206ENST00000419533 KDM5AP29375 1690 aaKnown RBP9.88□□□□□ -0.83
UBR4-206ENST00000419533 RANBP6O60518 1105 aaKnown RBP9.88□□□□□ -0.83
UBR4-206ENST00000419533 WDR17Q8IZU2 1322 aa9.88□□□□□ -0.83
UBR4-206ENST00000419533 CBFA2T2O43439 604 aa9.88□□□□□ -0.83
UBR4-206ENST00000419533 TEX35Q5T0J7 233 aa9.88□□□□□ -0.83
UBR4-206ENST00000419533 SETDB2Q96T68 719 aa9.88□□□□□ -0.83
UBR4-206ENST00000419533 DLC1Q96QB1 1528 aa9.87□□□□□ -0.83
UBR4-206ENST00000419533 HLA-DOAP06340 250 aa9.87□□□□□ -0.83
UBR4-206ENST00000419533 PRPF40BQ6NWY9 871 aaKnown RBP9.87□□□□□ -0.83
UBR4-206ENST00000419533 GJD4Q96KN9 370 aaPredicted RBP9.87□□□□□ -0.83
UBR4-206ENST00000419533 PHAXQ9H814 394 aaKnown RBP9.87□□□□□ -0.83
UBR4-206ENST00000419533 DEPDC5O75140 1603 aa9.87□□□□□ -0.83
UBR4-206ENST00000419533 UQCRFS1P1P0C7P4 283 aa9.87□□□□□ -0.83
UBR4-206ENST00000419533 CCDC184Q52MB2 194 aa9.87□□□□□ -0.83
UBR4-206ENST00000419533 TRAPPC3LQ5T215 181 aa9.87□□□□□ -0.83
UBR4-206ENST00000419533 ANKRD13DQ6ZTN6 518 aa9.87□□□□□ -0.83
UBR4-206ENST00000419533 CABP5Q9NP86 173 aa9.87□□□□□ -0.83
UBR4-206ENST00000419533 IQGAP1P46940 1657 aa9.87□□□□□ -0.83
UBR4-206ENST00000419533 TTLL5Q6EMB2 1281 aa9.87□□□□□ -0.83
UBR4-206ENST00000419533 MTERF4Q7Z6M4 381 aaKnown RBP9.87□□□□□ -0.83
UBR4-206ENST00000419533 EYA1Q99502 592 aa9.87□□□□□ -0.83
UBR4-206ENST00000419533 SMARCA5O60264 1052 aaPredicted RBP9.87□□□□□ -0.83
UBR4-206ENST00000419533 EVI5LQ96CN4 794 aa9.87□□□□□ -0.83
UBR4-206ENST00000419533 DEF6Q9H4E7 631 aa9.87□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms