RNA–Protein interactions for RNA: ENST00000419500.1

HMGN1P4-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 4, humanhuman

BASIC

Gene HMGN1P4, Length 290 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P4-201ENST00000419500 C8orf58Q8NAV2 365 aa16.43■□□□□ 0.22
HMGN1P4-201ENST00000419500 RPGRQ92834 1020 aaKnown RBP16.43■□□□□ 0.22
HMGN1P4-201ENST00000419500 UTP14AQ9BVJ6 771 aaKnown RBP16.43■□□□□ 0.22
HMGN1P4-201ENST00000419500 RNF123Q5XPI4 1314 aa16.43■□□□□ 0.22
HMGN1P4-201ENST00000419500 LMNB1P20700 586 aa16.42■□□□□ 0.22
HMGN1P4-201ENST00000419500 GOLGA2Q08379 1002 aa16.42■□□□□ 0.22
HMGN1P4-201ENST00000419500 TCIRG1Q13488 830 aa16.42■□□□□ 0.22
HMGN1P4-201ENST00000419500 CCDC30Q5VVM6 783 aa16.42■□□□□ 0.22
HMGN1P4-201ENST00000419500 ANKRD13DQ6ZTN6 518 aa16.42■□□□□ 0.22
HMGN1P4-201ENST00000419500 PLBD2Q8NHP8 589 aa16.42■□□□□ 0.22
HMGN1P4-201ENST00000419500 SLX4Q8IY92 1834 aa16.42■□□□□ 0.22
HMGN1P4-201ENST00000419500 NFKBIEO00221 500 aa16.41■□□□□ 0.22
HMGN1P4-201ENST00000419500 ALDH1B1P30837 517 aa16.41■□□□□ 0.22
HMGN1P4-201ENST00000419500 WDR63Q8IWG1 891 aa16.41■□□□□ 0.22
HMGN1P4-201ENST00000419500 TIAM2Q8IVF5 1701 aa16.41■□□□□ 0.22
HMGN1P4-201ENST00000419500 SBF1O95248 1867 aa16.41■□□□□ 0.22
HMGN1P4-201ENST00000419500 CRY2Q49AN0 593 aa16.4■□□□□ 0.22
HMGN1P4-201ENST00000419500 CCDC93Q567U6 631 aa16.4■□□□□ 0.22
HMGN1P4-201ENST00000419500 RIC3Q7Z5B4 369 aa16.4■□□□□ 0.22
HMGN1P4-201ENST00000419500 NLRP10Q86W26 655 aa16.4■□□□□ 0.22
HMGN1P4-201ENST00000419500 TSPYL6Q8N831 410 aa16.4■□□□□ 0.22
HMGN1P4-201ENST00000419500 STK31Q9BXU1 1019 aa16.4■□□□□ 0.22
HMGN1P4-201ENST00000419500 TAOK3Q9H2K8 898 aa16.4■□□□□ 0.22
HMGN1P4-201ENST00000419500 TRMT112Q9UI30 125 aaKnown RBP16.4■□□□□ 0.22
HMGN1P4-201ENST00000419500 FANCIQ9NVI1 1328 aa16.4■□□□□ 0.22
HMGN1P4-201ENST00000419500 ZC3H4Q9UPT8 1303 aaKnown RBP16.4■□□□□ 0.22
HMGN1P4-201ENST00000419500 FER1L6Q2WGJ9 1857 aa16.39■□□□□ 0.22
HMGN1P4-201ENST00000419500 TWISTNBQ3B726 338 aaPredicted RBP16.39■□□□□ 0.21
HMGN1P4-201ENST00000419500 NLRP3Q96P20 1036 aa16.39■□□□□ 0.21
HMGN1P4-201ENST00000419500 SH3TC1Q8TE82 1336 aa16.39■□□□□ 0.21
HMGN1P4-201ENST00000419500 DDX58O95786 925 aaKnown RBP16.38■□□□□ 0.21
HMGN1P4-201ENST00000419500 C1QTNF8P60827 252 aa16.38■□□□□ 0.21
HMGN1P4-201ENST00000419500 PHAXQ9H814 394 aaKnown RBP16.38■□□□□ 0.21
HMGN1P4-201ENST00000419500 KDM2BQ8NHM5 1336 aa16.38■□□□□ 0.21
HMGN1P4-201ENST00000419500 LTBP3Q9NS15 1303 aa16.38■□□□□ 0.21
HMGN1P4-201ENST00000419500 POTEDQ86YR6 584 aa16.37■□□□□ 0.21
HMGN1P4-201ENST00000419500 RBM17Q96I25 401 aaKnown RBP16.37■□□□□ 0.21
HMGN1P4-201ENST00000419500 ATP5J2-PTCD1G3V325 749 aa16.36■□□□□ 0.21
HMGN1P4-201ENST00000419500 ZNF428Q96B54 188 aa16.36■□□□□ 0.21
HMGN1P4-201ENST00000419500 MYH16Q9H6N6 1097 aa16.36■□□□□ 0.21
HMGN1P4-201ENST00000419500 HCLS1P14317 486 aaPredicted RBP16.35■□□□□ 0.21
HMGN1P4-201ENST00000419500 HOXA10P31260 410 aaPredicted RBP16.35■□□□□ 0.21
HMGN1P4-201ENST00000419500 PRELPP51888 382 aa16.35■□□□□ 0.21
HMGN1P4-201ENST00000419500 SLC10A5Q5PT55 438 aa16.35■□□□□ 0.21
HMGN1P4-201ENST00000419500 C3orf67Q6ZVT6 689 aa16.35■□□□□ 0.21
HMGN1P4-201ENST00000419500 C7orf43Q8WVR3 580 aa16.35■□□□□ 0.21
HMGN1P4-201ENST00000419500 ISCA1Q9BUE6 129 aa16.35■□□□□ 0.21
HMGN1P4-201ENST00000419500 CCDC88AQ3V6T2 1871 aa16.35■□□□□ 0.21
HMGN1P4-201ENST00000419500 LAMB2P55268 1798 aa16.34■□□□□ 0.21
HMGN1P4-201ENST00000419500 TCERG1O14776 1098 aaKnown RBP16.34■□□□□ 0.21
HMGN1P4-201ENST00000419500 PPEF1O14829 653 aaPredicted RBP16.34■□□□□ 0.21
HMGN1P4-201ENST00000419500 FKBP4Q02790 459 aaKnown RBP eCLIP16.34■□□□□ 0.21
HMGN1P4-201ENST00000419500 RTKN2Q8IZC4 609 aa16.34■□□□□ 0.21
HMGN1P4-201ENST00000419500 CRAMP1Q96RY5 1269 aa16.34■□□□□ 0.21
HMGN1P4-201ENST00000419500 MYD88Q99836 296 aa16.34■□□□□ 0.21
HMGN1P4-201ENST00000419500 TMX4Q9H1E5 349 aaPredicted RBP16.34■□□□□ 0.21
HMGN1P4-201ENST00000419500 OLFM4Q6UX06 510 aa16.33■□□□□ 0.2
HMGN1P4-201ENST00000419500 SYNE4Q8N205 404 aa16.33■□□□□ 0.2
HMGN1P4-201ENST00000419500 NMRK2Q9NPI5 230 aa16.33■□□□□ 0.2
HMGN1P4-201ENST00000419500 DDX60Q8IY21 1712 aaKnown RBP16.33■□□□□ 0.2
HMGN1P4-201ENST00000419500 CCER2I3L3R5 266 aa16.32■□□□□ 0.2
HMGN1P4-201ENST00000419500 KIF3CO14782 793 aa16.32■□□□□ 0.2
HMGN1P4-201ENST00000419500 ABCC4O15439 1325 aa16.32■□□□□ 0.2
HMGN1P4-201ENST00000419500 SLC4A2P04920 1241 aa16.32■□□□□ 0.2
HMGN1P4-201ENST00000419500 EXOSC9Q06265 439 aaKnown RBP16.32■□□□□ 0.2
HMGN1P4-201ENST00000419500 TRIM28Q13263 835 aaKnown RBP16.32■□□□□ 0.2
HMGN1P4-201ENST00000419500 RTL5Q5HYW3 569 aaPredicted RBP16.32■□□□□ 0.2
HMGN1P4-201ENST00000419500 CC2D2BQ6DHV5 1058 aa16.32■□□□□ 0.2
HMGN1P4-201ENST00000419500 C16orf71Q8IYS4 520 aaPredicted RBP16.32■□□□□ 0.2
HMGN1P4-201ENST00000419500 FAM89AQ96GI7 184 aa16.32■□□□□ 0.2
HMGN1P4-201ENST00000419500 DICER1Q9UPY3 1922 aaKnown RBP16.32■□□□□ 0.2
HMGN1P4-201ENST00000419500 GLTPD2A6NH11 291 aa16.31■□□□□ 0.2
HMGN1P4-201ENST00000419500 NEXNQ0ZGT2 675 aa16.31■□□□□ 0.2
HMGN1P4-201ENST00000419500 DPY19L2Q6NUT2 758 aa16.31■□□□□ 0.2
HMGN1P4-201ENST00000419500 DDX46Q7L014 1031 aaKnown RBP16.31■□□□□ 0.2
HMGN1P4-201ENST00000419500 METTL22Q9BUU2 404 aaPredicted RBP16.31■□□□□ 0.2
HMGN1P4-201ENST00000419500 SPINK5Q9NQ38 1064 aaPredicted RBP16.31■□□□□ 0.2
HMGN1P4-201ENST00000419500 MAP3K2Q9Y2U5 619 aa16.31■□□□□ 0.2
HMGN1P4-201ENST00000419500 PI4KAP2A4QPH2 592 aa16.3■□□□□ 0.2
HMGN1P4-201ENST00000419500 HSP90B1P14625 803 aaKnown RBP16.3■□□□□ 0.2
HMGN1P4-201ENST00000419500 GRIPAP1Q4V328 841 aa16.3■□□□□ 0.2
HMGN1P4-201ENST00000419500 KSR2Q6VAB6 950 aa16.3■□□□□ 0.2
HMGN1P4-201ENST00000419500 PI4KAP1Q8N8J0 262 aa16.3■□□□□ 0.2
HMGN1P4-201ENST00000419500 ZBTB38Q8NAP3 1195 aaPredicted RBP16.3■□□□□ 0.2
HMGN1P4-201ENST00000419500 CCDC191Q8NCU4 936 aa16.3■□□□□ 0.2
HMGN1P4-201ENST00000419500 ZNF277Q9NRM2 450 aaPredicted RBP16.3■□□□□ 0.2
HMGN1P4-201ENST00000419500 CWC25Q9NXE8 425 aaPredicted RBP16.3■□□□□ 0.2
HMGN1P4-201ENST00000419500 IRS4O14654 1257 aaPredicted RBP16.29■□□□□ 0.2
HMGN1P4-201ENST00000419500 FLIIQ13045 1269 aa16.29■□□□□ 0.2
HMGN1P4-201ENST00000419500 PSMD1Q99460 953 aa16.29■□□□□ 0.2
HMGN1P4-201ENST00000419500 SNED1Q8TER0 1413 aa16.28■□□□□ 0.2
HMGN1P4-201ENST00000419500 ZNF521Q96K83 1311 aa16.28■□□□□ 0.2
HMGN1P4-201ENST00000419500 VAMP4O75379 141 aa16.28■□□□□ 0.2
HMGN1P4-201ENST00000419500 TOMM70O94826 608 aa16.28■□□□□ 0.2
HMGN1P4-201ENST00000419500 IARSP41252 1262 aaKnown RBP16.28■□□□□ 0.2
HMGN1P4-201ENST00000419500 FKBP5Q13451 457 aaPredicted RBP16.28■□□□□ 0.2
HMGN1P4-201ENST00000419500 GRAPQ13588 217 aa16.28■□□□□ 0.2
HMGN1P4-201ENST00000419500 GRAPLQ8TC17 118 aaPredicted RBP16.28■□□□□ 0.2
HMGN1P4-201ENST00000419500 RRAGCQ9HB90 399 aa16.28■□□□□ 0.2
HMGN1P4-201ENST00000419500 BBOX1O75936 387 aa16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms