RNA–Protein interactions for RNA: ENST00000419437.5

THUMPD3-204, Transcript of THUMP domain containing 3, humanhuman

TSL 2

Gene THUMPD3, Length 704 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD3-204ENST00000419437 IFT57Q9NWB7 429 aa15.2■□□□□ 0.02
THUMPD3-204ENST00000419437 CHADLQ6NUI6 762 aa15.19■□□□□ 0.02
THUMPD3-204ENST00000419437 GIGYF2Q6Y7W6 1299 aaKnown RBP15.19■□□□□ 0.02
THUMPD3-204ENST00000419437 DDX21Q9NR30 783 aaKnown RBP eCLIP15.19■□□□□ 0.02
THUMPD3-204ENST00000419437 CREBZFQ9NS37 354 aa15.19■□□□□ 0.02
THUMPD3-204ENST00000419437 CHPF2Q9P2E5 772 aa15.19■□□□□ 0.02
THUMPD3-204ENST00000419437 KLRG2A4D1S0 409 aaPredicted RBP15.18■□□□□ 0.02
THUMPD3-204ENST00000419437 IQCA1LA6NCM1 817 aa15.18■□□□□ 0.02
THUMPD3-204ENST00000419437 TNS4Q8IZW8 715 aa15.18■□□□□ 0.02
THUMPD3-204ENST00000419437 C7orf43Q8WVR3 580 aa15.18■□□□□ 0.02
THUMPD3-204ENST00000419437 LAMB4A4D0S4 1761 aa15.18■□□□□ 0.02
THUMPD3-204ENST00000419437 HOXB7P09629 217 aa15.17■□□□□ 0.02
THUMPD3-204ENST00000419437 HSPA1AP0DMV8 641 aaKnown RBP15.17■□□□□ 0.02
THUMPD3-204ENST00000419437 HSPA1BP0DMV9 641 aaKnown RBP15.17■□□□□ 0.02
THUMPD3-204ENST00000419437 NPR1P16066 1061 aa15.17■□□□□ 0.02
THUMPD3-204ENST00000419437 SUSD4Q5VX71 490 aa15.17■□□□□ 0.02
THUMPD3-204ENST00000419437 NUTM1Q86Y26 1132 aa15.17■□□□□ 0.02
THUMPD3-204ENST00000419437 WWC1Q8IX03 1113 aa15.17■□□□□ 0.02
THUMPD3-204ENST00000419437 ZNF34Q8IZ26 560 aa15.17■□□□□ 0.02
THUMPD3-204ENST00000419437 L3MBTL3Q96JM7 780 aaPredicted RBP15.17■□□□□ 0.02
THUMPD3-204ENST00000419437 NYXQ9GZU5 481 aa15.17■□□□□ 0.02
THUMPD3-204ENST00000419437 DBF4Q9UBU7 674 aaPredicted RBP15.17■□□□□ 0.02
THUMPD3-204ENST00000419437 DDNO94850 711 aaPredicted RBP15.16■□□□□ 0.02
THUMPD3-204ENST00000419437 CCDC93Q567U6 631 aa15.16■□□□□ 0.02
THUMPD3-204ENST00000419437 C8orf58Q8NAV2 365 aa15.16■□□□□ 0.02
THUMPD3-204ENST00000419437 CCDC27Q2M243 656 aa15.15■□□□□ 0.02
THUMPD3-204ENST00000419437 LDHDQ86WU2 507 aa15.15■□□□□ 0.02
THUMPD3-204ENST00000419437 TSR2Q969E8 191 aaKnown RBP15.15■□□□□ 0.02
THUMPD3-204ENST00000419437 UBN2Q6ZU65 1347 aa15.15■□□□□ 0.02
THUMPD3-204ENST00000419437 FKBP4Q02790 459 aaKnown RBP eCLIP15.14■□□□□ 0.01
THUMPD3-204ENST00000419437 ANKRD13DQ6ZTN6 518 aa15.14■□□□□ 0.01
THUMPD3-204ENST00000419437 PPP1R42Q7Z4L9 355 aa15.14■□□□□ 0.01
THUMPD3-204ENST00000419437 RTKN2Q8IZC4 609 aa15.14■□□□□ 0.01
THUMPD3-204ENST00000419437 ZNF428Q96B54 188 aa15.14■□□□□ 0.01
THUMPD3-204ENST00000419437 HYPKQ9NX55 129 aa15.14■□□□□ 0.01
THUMPD3-204ENST00000419437 NUP98P52948 1817 aa15.13■□□□□ 0.01
THUMPD3-204ENST00000419437 ALDH1B1P30837 517 aa15.13■□□□□ 0.01
THUMPD3-204ENST00000419437 TCIRG1Q13488 830 aa15.13■□□□□ 0.01
THUMPD3-204ENST00000419437 PARP10Q53GL7 1025 aa15.13■□□□□ 0.01
THUMPD3-204ENST00000419437 TSPYL6Q8N831 410 aa15.13■□□□□ 0.01
THUMPD3-204ENST00000419437 TAF1DQ9H5J8 278 aaPredicted RBP15.13■□□□□ 0.01
THUMPD3-204ENST00000419437 ADAMTSL1Q8N6G6 1762 aa15.13■□□□□ 0.01
THUMPD3-204ENST00000419437 PASKQ96RG2 1323 aa15.13■□□□□ 0.01
THUMPD3-204ENST00000419437 POTEIP0CG38 1075 aa15.12■□□□□ 0.01
THUMPD3-204ENST00000419437 POTEJP0CG39 1038 aa15.12■□□□□ 0.01
THUMPD3-204ENST00000419437 HSP90AB3PQ58FF7 597 aa15.12■□□□□ 0.01
THUMPD3-204ENST00000419437 UTP14AQ9BVJ6 771 aaKnown RBP15.12■□□□□ 0.01
THUMPD3-204ENST00000419437 PHAXQ9H814 394 aaKnown RBP15.12■□□□□ 0.01
THUMPD3-204ENST00000419437 CNTNAP1P78357 1384 aa15.11■□□□□ 0.01
THUMPD3-204ENST00000419437 NTSR2O95665 410 aa15.11■□□□□ 0.01
THUMPD3-204ENST00000419437 NCBP3Q53F19 620 aaKnown RBP15.11■□□□□ 0.01
THUMPD3-204ENST00000419437 PLBD2Q8NHP8 589 aa15.11■□□□□ 0.01
THUMPD3-204ENST00000419437 TCERG1O14776 1098 aaKnown RBP15.1■□□□□ 0.01
THUMPD3-204ENST00000419437 CRY2Q49AN0 593 aa15.1■□□□□ 0.01
THUMPD3-204ENST00000419437 CCDC30Q5VVM6 783 aa15.1■□□□□ 0.01
THUMPD3-204ENST00000419437 RIC3Q7Z5B4 369 aa15.1■□□□□ 0.01
THUMPD3-204ENST00000419437 NLRP10Q86W26 655 aa15.1■□□□□ 0.01
THUMPD3-204ENST00000419437 SYNE4Q8N205 404 aa15.1■□□□□ 0.01
THUMPD3-204ENST00000419437 MKRN1Q9UHC7 482 aaKnown RBP15.1■□□□□ 0.01
THUMPD3-204ENST00000419437 TRMT112Q9UI30 125 aaKnown RBP15.1■□□□□ 0.01
THUMPD3-204ENST00000419437 IL16Q14005 1332 aa15.1■□□□□ 0.01
THUMPD3-204ENST00000419437 ABCC12Q96J65 1359 aa15.1■□□□□ 0.01
THUMPD3-204ENST00000419437 RIC1Q4ADV7 1423 aa15.09■□□□□ 0.01
THUMPD3-204ENST00000419437 ATP5J2-PTCD1G3V325 749 aa15.09■□□□□ 0.01
THUMPD3-204ENST00000419437 OLFM4Q6UX06 510 aa15.09■□□□□ 0.01
THUMPD3-204ENST00000419437 PNMA8AQ86V59 439 aaPredicted RBP15.09■□□□□ 0.01
THUMPD3-204ENST00000419437 WDR63Q8IWG1 891 aa15.09■□□□□ 0.01
THUMPD3-204ENST00000419437 RPGRQ92834 1020 aaKnown RBP15.09■□□□□ 0.01
THUMPD3-204ENST00000419437 NLRP3Q96P20 1036 aa15.09■□□□□ 0.01
THUMPD3-204ENST00000419437 PSMD1Q99460 953 aa15.09■□□□□ 0.01
THUMPD3-204ENST00000419437 CHMP4AQ9BY43 222 aa15.09■□□□□ 0.01
THUMPD3-204ENST00000419437 ZNF277Q9NRM2 450 aaPredicted RBP15.09■□□□□ 0.01
THUMPD3-204ENST00000419437 HACL1Q9UJ83 578 aa15.09■□□□□ 0.01
THUMPD3-204ENST00000419437 SNED1Q8TER0 1413 aa15.09■□□□□ 0.01
THUMPD3-204ENST00000419437 TMEM88BA6NKF7 163 aa15.08■□□□□ 0
THUMPD3-204ENST00000419437 FZD9O00144 591 aa15.08■□□□□ 0
THUMPD3-204ENST00000419437 CAPN15O75808 1086 aa15.08■□□□□ 0
THUMPD3-204ENST00000419437 ITGBL1O95965 494 aaPredicted RBP15.08■□□□□ 0
THUMPD3-204ENST00000419437 HCLS1P14317 486 aaPredicted RBP15.08■□□□□ 0
THUMPD3-204ENST00000419437 TWISTNBQ3B726 338 aaPredicted RBP15.08■□□□□ 0
THUMPD3-204ENST00000419437 GRIPAP1Q4V328 841 aa15.08■□□□□ 0
THUMPD3-204ENST00000419437 SLC10A5Q5PT55 438 aa15.08■□□□□ 0
THUMPD3-204ENST00000419437 CC2D2BQ6DHV5 1058 aa15.08■□□□□ 0
THUMPD3-204ENST00000419437 C3orf67Q6ZVT6 689 aa15.08■□□□□ 0
THUMPD3-204ENST00000419437 GPC2Q8N158 579 aa15.08■□□□□ 0
THUMPD3-204ENST00000419437 ZNF541Q9H0D2 1346 aa15.08■□□□□ 0
THUMPD3-204ENST00000419437 IBTKQ9P2D0 1353 aaPredicted RBP15.08■□□□□ 0
THUMPD3-204ENST00000419437 IARSP41252 1262 aaKnown RBP15.07■□□□□ 0
THUMPD3-204ENST00000419437 GOLGA2Q08379 1002 aa15.07■□□□□ 0
THUMPD3-204ENST00000419437 RBM17Q96I25 401 aaKnown RBP15.07■□□□□ 0
THUMPD3-204ENST00000419437 EPHX2P34913 555 aa15.06■□□□□ 0
THUMPD3-204ENST00000419437 RTL5Q5HYW3 569 aaPredicted RBP15.06■□□□□ 0
THUMPD3-204ENST00000419437 JDP2Q8WYK2 163 aa15.06■□□□□ 0
THUMPD3-204ENST00000419437 ISCA1Q9BUE6 129 aa15.06■□□□□ 0
THUMPD3-204ENST00000419437 STK31Q9BXU1 1019 aa15.06■□□□□ 0
THUMPD3-204ENST00000419437 SPINK5Q9NQ38 1064 aaPredicted RBP15.06■□□□□ 0
THUMPD3-204ENST00000419437 PRDM10Q9NQV6 1147 aa15.06■□□□□ 0
THUMPD3-204ENST00000419437 HOXA10P31260 410 aaPredicted RBP15.05■□□□□ -0
THUMPD3-204ENST00000419437 EAPPQ56P03 285 aaPredicted RBP15.05■□□□□ -0
THUMPD3-204ENST00000419437 FAM89AQ96GI7 184 aa15.05■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms