RNA–Protein interactions for RNA: ENST00000419334.1

EPCAM-203, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 3

Gene EPCAM, Length 609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-203ENST00000419334 GPR162Q16538 588 aa22.57■■□□□ 1.2
EPCAM-203ENST00000419334 NUTM1Q86Y26 1132 aa22.57■■□□□ 1.2
EPCAM-203ENST00000419334 C2CD5Q86YS7 1000 aa22.57■■□□□ 1.2
EPCAM-203ENST00000419334 ABCC12Q96J65 1359 aa22.57■■□□□ 1.2
EPCAM-203ENST00000419334 TNRC6CQ9HCJ0 1690 aaKnown RBP22.57■■□□□ 1.2
EPCAM-203ENST00000419334 ATP5J2-PTCD1G3V325 749 aa22.56■■□□□ 1.2
EPCAM-203ENST00000419334 H0YIN7 160 aa22.56■■□□□ 1.2
EPCAM-203ENST00000419334 ALDH1L2Q3SY69 923 aa22.56■■□□□ 1.2
EPCAM-203ENST00000419334 ERFEQ4G0M1 354 aa22.56■■□□□ 1.2
EPCAM-203ENST00000419334 MYD88Q99836 296 aa22.56■■□□□ 1.2
EPCAM-203ENST00000419334 PIM2Q9P1W9 311 aa22.56■■□□□ 1.2
EPCAM-203ENST00000419334 KLRG2A4D1S0 409 aaPredicted RBP22.55■■□□□ 1.2
EPCAM-203ENST00000419334 YBX3P16989 372 aaKnown RBP eCLIP22.55■■□□□ 1.22e-6■■□□□ 11.4
EPCAM-203ENST00000419334 PELP1Q8IZL8 1130 aaKnown RBP22.55■■□□□ 1.2
EPCAM-203ENST00000419334 MRPL50Q8N5N7 158 aaKnown RBP22.54■■□□□ 1.2
EPCAM-203ENST00000419334 SSH1Q8WYL5 1049 aa22.54■■□□□ 1.2
EPCAM-203ENST00000419334 TRMT112Q9UI30 125 aaKnown RBP22.54■■□□□ 1.2
EPCAM-203ENST00000419334 SLC10A5Q5PT55 438 aa22.53■■□□□ 1.2
EPCAM-203ENST00000419334 CCDC191Q8NCU4 936 aa22.53■■□□□ 1.2
EPCAM-203ENST00000419334 WWC3Q9ULE0 1092 aa22.53■■□□□ 1.2
EPCAM-203ENST00000419334 SH3TC1Q8TE82 1336 aa22.53■■□□□ 1.2
EPCAM-203ENST00000419334 LAMB2P55268 1798 aa22.53■■□□□ 1.2
EPCAM-203ENST00000419334 DDX60Q8IY21 1712 aaKnown RBP22.52■■□□□ 1.2
EPCAM-203ENST00000419334 SRGNP10124 158 aa22.52■■□□□ 1.2
EPCAM-203ENST00000419334 NEXNQ0ZGT2 675 aa22.52■■□□□ 1.2
EPCAM-203ENST00000419334 DNAAF4Q8WXU2 420 aa22.52■■□□□ 1.2
EPCAM-203ENST00000419334 CACNA1SQ13698 1873 aa22.51■■□□□ 1.19
EPCAM-203ENST00000419334 GRIN3BO60391 1043 aa22.51■■□□□ 1.19
EPCAM-203ENST00000419334 DALRD3Q5D0E6 543 aaKnown RBP22.51■■□□□ 1.19
EPCAM-203ENST00000419334 BCS1LQ9Y276 419 aa22.51■■□□□ 1.19
EPCAM-203ENST00000419334 IGKV5-2P06315 115 aa22.5■■□□□ 1.19
EPCAM-203ENST00000419334 CRY2Q49AN0 593 aa22.5■■□□□ 1.19
EPCAM-203ENST00000419334 STYK1Q6J9G0 422 aa22.5■■□□□ 1.19
EPCAM-203ENST00000419334 MASTLQ96GX5 879 aa22.5■■□□□ 1.19
EPCAM-203ENST00000419334 CWC25Q9NXE8 425 aaPredicted RBP22.5■■□□□ 1.19
EPCAM-203ENST00000419334 CHD4Q14839 1912 aa22.5■■□□□ 1.19
EPCAM-203ENST00000419334 GOLGB1Q14789 3259 aaKnown RBP22.49■■□□□ 1.19
EPCAM-203ENST00000419334 NPR1P16066 1061 aa22.49■■□□□ 1.19
EPCAM-203ENST00000419334 TTLL6Q8N841 843 aa22.49■■□□□ 1.19
EPCAM-203ENST00000419334 BCL2L13Q9BXK5 485 aa22.49■■□□□ 1.19
EPCAM-203ENST00000419334 SMC4Q9NTJ3 1288 aa22.49■■□□□ 1.19
EPCAM-203ENST00000419334 PTPRCP08575 1304 aa22.49■■□□□ 1.19
EPCAM-203ENST00000419334 SYNE4Q8N205 404 aa22.48■■□□□ 1.19
EPCAM-203ENST00000419334 ZBTB38Q8NAP3 1195 aaPredicted RBP22.48■■□□□ 1.19
EPCAM-203ENST00000419334 CNKSR1Q969H4 720 aa22.48■■□□□ 1.19
EPCAM-203ENST00000419334 ZNF622Q969S3 477 aaKnown RBP eCLIP22.48■■□□□ 1.19
EPCAM-203ENST00000419334 NEURL1BA8MQ27 555 aa22.47■■□□□ 1.19
EPCAM-203ENST00000419334 F6X3S4 739 aa22.47■■□□□ 1.19
EPCAM-203ENST00000419334 PCCAP05165 728 aaPredicted RBP22.47■■□□□ 1.19
EPCAM-203ENST00000419334 RARSP54136 660 aaKnown RBP22.47■■□□□ 1.19
EPCAM-203ENST00000419334 BRPF1P55201 1214 aaPredicted RBP22.47■■□□□ 1.19
EPCAM-203ENST00000419334 CWF19L2Q2TBE0 894 aaKnown RBP22.47■■□□□ 1.19
EPCAM-203ENST00000419334 LINS1Q8NG48 757 aa22.47■■□□□ 1.19
EPCAM-203ENST00000419334 FAM89AQ96GI7 184 aa22.47■■□□□ 1.19
EPCAM-203ENST00000419334 NLRP3Q96P20 1036 aa22.47■■□□□ 1.19
EPCAM-203ENST00000419334 SLX4Q8IY92 1834 aa22.47■■□□□ 1.19
EPCAM-203ENST00000419334 HCLS1P14317 486 aaPredicted RBP22.46■■□□□ 1.19
EPCAM-203ENST00000419334 C3orf67Q6ZVT6 689 aa22.45■■□□□ 1.18
EPCAM-203ENST00000419334 HOXA10P31260 410 aaPredicted RBP22.44■■□□□ 1.18
EPCAM-203ENST00000419334 BEND3Q5T5X7 828 aa22.44■■□□□ 1.18
EPCAM-203ENST00000419334 RPGRQ92834 1020 aaKnown RBP22.44■■□□□ 1.18
EPCAM-203ENST00000419334 UTRNP46939 3433 aa22.44■■□□□ 1.18
EPCAM-203ENST00000419334 MYH3P11055 1940 aa22.43■■□□□ 1.18
EPCAM-203ENST00000419334 CDHR2Q9BYE9 1310 aa22.43■■□□□ 1.18
EPCAM-203ENST00000419334 IRS4O14654 1257 aaPredicted RBP22.43■■□□□ 1.18
EPCAM-203ENST00000419334 HSP90B1P14625 803 aaKnown RBP22.43■■□□□ 1.18
EPCAM-203ENST00000419334 ALDH1B1P30837 517 aa22.43■■□□□ 1.18
EPCAM-203ENST00000419334 GCKRQ14397 625 aa22.43■■□□□ 1.18
EPCAM-203ENST00000419334 RTL5Q5HYW3 569 aaPredicted RBP22.43■■□□□ 1.18
EPCAM-203ENST00000419334 PRPF40BQ6NWY9 871 aaKnown RBP22.42■■□□□ 1.18
EPCAM-203ENST00000419334 KIF16BQ96L93 1317 aa22.41■■□□□ 1.18
EPCAM-203ENST00000419334 SLC4A10Q6U841 1118 aa22.41■■□□□ 1.18
EPCAM-203ENST00000419334 RBM17Q96I25 401 aaKnown RBP22.41■■□□□ 1.18
EPCAM-203ENST00000419334 CRAMP1Q96RY5 1269 aa22.41■■□□□ 1.18
EPCAM-203ENST00000419334 H7C1W4 665 aa22.4■■□□□ 1.18
EPCAM-203ENST00000419334 ALDH1L1O75891 902 aa22.4■■□□□ 1.18
EPCAM-203ENST00000419334 SF3B3Q15393 1217 aaKnown RBP22.4■■□□□ 1.18
EPCAM-203ENST00000419334 NOB1Q9ULX3 412 aaKnown RBP22.4■■□□□ 1.18
EPCAM-203ENST00000419334 FER1L6Q2WGJ9 1857 aa22.4■■□□□ 1.18
EPCAM-203ENST00000419334 PDE8AO60658 829 aa22.39■■□□□ 1.17
EPCAM-203ENST00000419334 JARID2Q92833 1246 aaPredicted RBP22.39■■□□□ 1.17
EPCAM-203ENST00000419334 SRCIN1Q9C0H9 1055 aa22.39■■□□□ 1.17
EPCAM-203ENST00000419334 ARHGAP27Q6ZUM4 889 aa22.38■■□□□ 1.17
EPCAM-203ENST00000419334 UBE3BQ7Z3V4 1068 aa22.38■■□□□ 1.17
EPCAM-203ENST00000419334 TAF1P21675 1872 aa22.37■■□□□ 1.17
EPCAM-203ENST00000419334 C21orf2O43822 256 aa22.37■■□□□ 1.17
EPCAM-203ENST00000419334 CASP7P55210 303 aa22.37■■□□□ 1.17
EPCAM-203ENST00000419334 SOGA3Q5TF21 947 aa22.37■■□□□ 1.17
EPCAM-203ENST00000419334 C7orf43Q8WVR3 580 aa22.37■■□□□ 1.17
EPCAM-203ENST00000419334 ARHGAP45Q92619 1136 aa22.37■■□□□ 1.17
EPCAM-203ENST00000419334 API5Q9BZZ5 524 aaKnown RBP22.37■■□□□ 1.17
EPCAM-203ENST00000419334 SBF1O95248 1867 aa22.37■■□□□ 1.17
EPCAM-203ENST00000419334 ABCC4O15439 1325 aa22.36■■□□□ 1.17
EPCAM-203ENST00000419334 BCAR3O75815 825 aa22.36■■□□□ 1.17
EPCAM-203ENST00000419334 DDX46Q7L014 1031 aaKnown RBP22.36■■□□□ 1.17
EPCAM-203ENST00000419334 PLA2G12BQ9BX93 195 aa22.35■■□□□ 1.17
EPCAM-203ENST00000419334 ZNF219Q9P2Y4 722 aaPredicted RBP22.35■■□□□ 1.17
EPCAM-203ENST00000419334 GRM8O00222 908 aa22.34■■□□□ 1.17
EPCAM-203ENST00000419334 PPEF1O14829 653 aaPredicted RBP22.33■■□□□ 1.17
EPCAM-203ENST00000419334 IPO8O15397 1037 aaKnown RBP22.33■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms