RNA–Protein interactions for RNA: ENST00000419220.1

LINC02539-202, Transcript of long intergenic non-protein coding RNA 2539, humanhuman

TSL 2

Gene LINC02539, Length 703 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02539-202ENST00000419220 TAF7Q15545 349 aaPredicted RBP8.77□□□□□ -1.01
LINC02539-202ENST00000419220 PROX2Q3B8N5 592 aa8.77□□□□□ -1.01
LINC02539-202ENST00000419220 PIGBQ92521 554 aa8.77□□□□□ -1.01
LINC02539-202ENST00000419220 DOT1LQ8TEK3 1739 aa8.77□□□□□ -1.01
LINC02539-202ENST00000419220 BTAF1O14981 1849 aa8.76□□□□□ -1.01
LINC02539-202ENST00000419220 ITGB4P16144 1822 aa8.76□□□□□ -1.01
LINC02539-202ENST00000419220 STARD3NLO95772 234 aa8.76□□□□□ -1.01
LINC02539-202ENST00000419220 TMPOP42166 694 aaKnown RBP8.76□□□□□ -1.01
LINC02539-202ENST00000419220 FAM9BQ8IZU0 186 aa8.76□□□□□ -1.01
LINC02539-202ENST00000419220 PHACTR3Q96KR7 559 aa8.76□□□□□ -1.01
LINC02539-202ENST00000419220 FMNL2Q96PY5 1086 aa8.76□□□□□ -1.01
LINC02539-202ENST00000419220 PLEKHF1Q96S99 279 aa8.76□□□□□ -1.01
LINC02539-202ENST00000419220 SHANK3Q9BYB0 1731 aa8.76□□□□□ -1.01
LINC02539-202ENST00000419220 SCN11AQ9UI33 1791 aa8.76□□□□□ -1.01
LINC02539-202ENST00000419220 PALLDQ8WX93 1383 aa8.75□□□□□ -1.01
LINC02539-202ENST00000419220 TNS1Q9HBL0 1735 aaKnown RBP8.75□□□□□ -1.01
LINC02539-202ENST00000419220 LOC102724428A0A0B4J2F2 783 aa8.75□□□□□ -1.01
LINC02539-202ENST00000419220 SIK1P57059 783 aa8.75□□□□□ -1.01
LINC02539-202ENST00000419220 CDHR5Q9HBB8 845 aa8.75□□□□□ -1.01
LINC02539-202ENST00000419220 LGR6Q9HBX8 967 aa8.75□□□□□ -1.01
LINC02539-202ENST00000419220 GPBP1L1Q9HC44 474 aaPredicted RBP8.75□□□□□ -1.01
LINC02539-202ENST00000419220 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.75□□□□□ -1.01
LINC02539-202ENST00000419220 TFCP2L1Q9NZI6 479 aa8.75□□□□□ -1.01
LINC02539-202ENST00000419220 TRIM66O15016 1216 aa8.74□□□□□ -1.01
LINC02539-202ENST00000419220 MAP3K7O43318 606 aa8.74□□□□□ -1.01
LINC02539-202ENST00000419220 SLC15A2Q16348 729 aa8.74□□□□□ -1.01
LINC02539-202ENST00000419220 TMEM132AQ24JP5 1023 aa8.74□□□□□ -1.01
LINC02539-202ENST00000419220 ZNF790Q6PG37 636 aa8.74□□□□□ -1.01
LINC02539-202ENST00000419220 CCDC146Q8IYE0 955 aa8.74□□□□□ -1.01
LINC02539-202ENST00000419220 LRCH3Q96II8 777 aa8.74□□□□□ -1.01
LINC02539-202ENST00000419220 KIAA1468Q9P260 1216 aa8.74□□□□□ -1.01
LINC02539-202ENST00000419220 PDZRN3Q9UPQ7 1066 aa8.74□□□□□ -1.01
LINC02539-202ENST00000419220 PCDHGA10Q9Y5H3 936 aa8.74□□□□□ -1.01
LINC02539-202ENST00000419220 VIRMAQ69YN4 1812 aaKnown RBP8.73□□□□□ -1.01
LINC02539-202ENST00000419220 GNPATO15228 680 aa8.73□□□□□ -1.01
LINC02539-202ENST00000419220 PTCD1O75127 700 aaKnown RBP8.73□□□□□ -1.01
LINC02539-202ENST00000419220 PHF14O94880 888 aa8.73□□□□□ -1.01
LINC02539-202ENST00000419220 GNAI1P63096 354 aa8.73□□□□□ -1.01
LINC02539-202ENST00000419220 TSR1Q2NL82 804 aaKnown RBP8.73□□□□□ -1.01
LINC02539-202ENST00000419220 RC3H1Q5TC82 1133 aaKnown RBP8.73□□□□□ -1.01
LINC02539-202ENST00000419220 MCM10Q7L590 875 aa8.73□□□□□ -1.01
LINC02539-202ENST00000419220 IL17REQ8NFR9 667 aa8.73□□□□□ -1.01
LINC02539-202ENST00000419220 SLC16A10Q8TF71 515 aa8.73□□□□□ -1.01
LINC02539-202ENST00000419220 FBXW7Q969H0 707 aa8.73□□□□□ -1.01
LINC02539-202ENST00000419220 ATG3Q9NT62 314 aa8.73□□□□□ -1.01
LINC02539-202ENST00000419220 TSPYL4Q9UJ04 414 aa8.73□□□□□ -1.01
LINC02539-202ENST00000419220 ASAP1Q9ULH1 1129 aa8.73□□□□□ -1.01
LINC02539-202ENST00000419220 HPS5Q9UPZ3 1129 aa8.73□□□□□ -1.01
LINC02539-202ENST00000419220 RTCBQ9Y3I0 505 aaKnown RBP8.73□□□□□ -1.01
LINC02539-202ENST00000419220 CEMIPQ8WUJ3 1361 aa8.73□□□□□ -1.01
LINC02539-202ENST00000419220 A0A087WZG4 1122 aa8.72□□□□□ -1.01
LINC02539-202ENST00000419220 APAF1O14727 1248 aa8.72□□□□□ -1.01
LINC02539-202ENST00000419220 SNRPA1P09661 255 aaKnown RBP8.72□□□□□ -1.01
LINC02539-202ENST00000419220 PTGDRQ13258 359 aa8.72□□□□□ -1.01
LINC02539-202ENST00000419220 CCDC27Q2M243 656 aa8.72□□□□□ -1.01
LINC02539-202ENST00000419220 TRAPPC3LQ5T215 181 aa8.72□□□□□ -1.01
LINC02539-202ENST00000419220 CCDC102AQ96A19 550 aa8.72□□□□□ -1.01
LINC02539-202ENST00000419220 LAS1LQ9Y4W2 734 aaKnown RBP8.72□□□□□ -1.01
LINC02539-202ENST00000419220 KDM6AO15550 1401 aaPredicted RBP8.71□□□□□ -1.01
LINC02539-202ENST00000419220 SSFA2P28290 1259 aa8.71□□□□□ -1.02
LINC02539-202ENST00000419220 POLD1P28340 1107 aa8.71□□□□□ -1.02
LINC02539-202ENST00000419220 MAP2K5Q13163 448 aa8.71□□□□□ -1.02
LINC02539-202ENST00000419220 HIC1Q14526 733 aa8.71□□□□□ -1.02
LINC02539-202ENST00000419220 DLG5Q8TDM6 1919 aa8.71□□□□□ -1.02
LINC02539-202ENST00000419220 LY75O60449 1722 aa8.71□□□□□ -1.02
LINC02539-202ENST00000419220 ZPR1O75312 459 aa8.7□□□□□ -1.02
LINC02539-202ENST00000419220 COL9A1P20849 921 aa8.7□□□□□ -1.02
LINC02539-202ENST00000419220 RFC4P35249 363 aa8.7□□□□□ -1.02
LINC02539-202ENST00000419220 PDE4DQ08499 809 aa8.7□□□□□ -1.02
LINC02539-202ENST00000419220 R3HDM1Q15032 1099 aaKnown RBP8.7□□□□□ -1.02
LINC02539-202ENST00000419220 WDR63Q8IWG1 891 aa8.7□□□□□ -1.02
LINC02539-202ENST00000419220 EPAS1Q99814 870 aa8.7□□□□□ -1.02
LINC02539-202ENST00000419220 SPON1Q9HCB6 807 aa8.7□□□□□ -1.02
LINC02539-202ENST00000419220 SOS1Q07889 1333 aaPredicted RBP8.7□□□□□ -1.02
LINC02539-202ENST00000419220 MRC1P22897 1456 aa8.7□□□□□ -1.02
LINC02539-202ENST00000419220 ZNF831Q5JPB2 1677 aa8.69□□□□□ -1.02
LINC02539-202ENST00000419220 RREB1Q92766 1687 aa8.69□□□□□ -1.02
LINC02539-202ENST00000419220 IRF6O14896 467 aa8.69□□□□□ -1.02
LINC02539-202ENST00000419220 SLC39A6Q13433 755 aa8.69□□□□□ -1.02
LINC02539-202ENST00000419220 DCTN1Q14203 1278 aa8.69□□□□□ -1.02
LINC02539-202ENST00000419220 TYW1BQ6NUM6 668 aa8.69□□□□□ -1.02
LINC02539-202ENST00000419220 PTF1AQ7RTS3 328 aa8.69□□□□□ -1.02
LINC02539-202ENST00000419220 MYH16Q9H6N6 1097 aa8.69□□□□□ -1.02
LINC02539-202ENST00000419220 IFT57Q9NWB7 429 aa8.69□□□□□ -1.02
LINC02539-202ENST00000419220 PPP1R1BQ9UD71 204 aaPredicted RBP8.69□□□□□ -1.02
LINC02539-202ENST00000419220 RRP7AQ9Y3A4 280 aaKnown RBP8.69□□□□□ -1.02
LINC02539-202ENST00000419220 IL16Q14005 1332 aa8.69□□□□□ -1.02
LINC02539-202ENST00000419220 CNTNAP4Q9C0A0 1308 aa8.69□□□□□ -1.02
LINC02539-202ENST00000419220 TOGARAM1Q9Y4F4 1720 aa8.68□□□□□ -1.02
LINC02539-202ENST00000419220 RPS6KA4O75676 772 aa8.68□□□□□ -1.02
LINC02539-202ENST00000419220 HOXB7P09629 217 aa8.68□□□□□ -1.02
LINC02539-202ENST00000419220 ARXQ96QS3 562 aa8.68□□□□□ -1.02
LINC02539-202ENST00000419220 MTFR1LQ9H019 292 aa8.68□□□□□ -1.02
LINC02539-202ENST00000419220 KDM4CQ9H3R0 1056 aa8.68□□□□□ -1.02
LINC02539-202ENST00000419220 LRRC4BQ9NT99 713 aa8.68□□□□□ -1.02
LINC02539-202ENST00000419220 CCDC87Q9NVE4 849 aa8.68□□□□□ -1.02
LINC02539-202ENST00000419220 SEPT9Q9UHD8 586 aaPredicted RBP8.68□□□□□ -1.02
LINC02539-202ENST00000419220 GTF3C3Q9Y5Q9 886 aa8.68□□□□□ -1.02
LINC02539-202ENST00000419220 HEG1Q9ULI3 1381 aa8.68□□□□□ -1.02
LINC02539-202ENST00000419220 ADAMTS7Q9UKP4 1686 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms