RNA–Protein interactions for RNA: ENST00000418713.5

RPUSD3-202, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 955 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-202ENST00000418713 KLRG2A4D1S0 409 aaPredicted RBP25.29■■□□□ 1.64
RPUSD3-202ENST00000418713 PI4KAP2A4QPH2 592 aa25.29■■□□□ 1.64
RPUSD3-202ENST00000418713 NTSR2O95665 410 aa25.29■■□□□ 1.64
RPUSD3-202ENST00000418713 ALDH1L2Q3SY69 923 aa25.29■■□□□ 1.64
RPUSD3-202ENST00000418713 SLC10A5Q5PT55 438 aa25.29■■□□□ 1.64
RPUSD3-202ENST00000418713 PI4KAP1Q8N8J0 262 aa25.29■■□□□ 1.64
RPUSD3-202ENST00000418713 CCDC191Q8NCU4 936 aa25.29■■□□□ 1.64
RPUSD3-202ENST00000418713 SH3TC1Q8TE82 1336 aa25.29■■□□□ 1.64
RPUSD3-202ENST00000418713 NPR1P16066 1061 aa25.28■■□□□ 1.64
RPUSD3-202ENST00000418713 ALDH1B1P30837 517 aa25.28■■□□□ 1.64
RPUSD3-202ENST00000418713 ERFEQ4G0M1 354 aa25.28■■□□□ 1.64
RPUSD3-202ENST00000418713 CCDC24Q8N4L8 307 aa25.28■■□□□ 1.64
RPUSD3-202ENST00000418713 MYD88Q99836 296 aa25.28■■□□□ 1.64
RPUSD3-202ENST00000418713 N4BP2Q86UW6 1770 aaPredicted RBP25.27■■□□□ 1.64
RPUSD3-202ENST00000418713 ATP5J2-PTCD1G3V325 749 aa25.27■■□□□ 1.64
RPUSD3-202ENST00000418713 SRGNP10124 158 aa25.27■■□□□ 1.64
RPUSD3-202ENST00000418713 YBX3P16989 372 aaKnown RBP eCLIP25.27■■□□□ 1.641e-6■■□□□ 12
RPUSD3-202ENST00000418713 NUTM1Q86Y26 1132 aa25.27■■□□□ 1.64
RPUSD3-202ENST00000418713 ZBED9Q6R2W3 1325 aa25.27■■□□□ 1.64
RPUSD3-202ENST00000418713 CWC25Q9NXE8 425 aaPredicted RBP25.26■■□□□ 1.63
RPUSD3-202ENST00000418713 RIC1Q4ADV7 1423 aa25.26■■□□□ 1.63
RPUSD3-202ENST00000418713 G2E3Q7L622 706 aa25.25■■□□□ 1.63
RPUSD3-202ENST00000418713 DNAAF4Q8WXU2 420 aa25.25■■□□□ 1.63
RPUSD3-202ENST00000418713 RPGRQ92834 1020 aaKnown RBP25.25■■□□□ 1.63
RPUSD3-202ENST00000418713 ANKRD36CQ5JPF3 1778 aa25.25■■□□□ 1.63
RPUSD3-202ENST00000418713 SOGA3Q5TF21 947 aa25.24■■□□□ 1.63
RPUSD3-202ENST00000418713 RBM17Q96I25 401 aaKnown RBP25.24■■□□□ 1.63
RPUSD3-202ENST00000418713 ZBTB38Q8NAP3 1195 aaPredicted RBP25.23■■□□□ 1.63
RPUSD3-202ENST00000418713 PTPRCP08575 1304 aa25.22■■□□□ 1.63
RPUSD3-202ENST00000418713 CRY2Q49AN0 593 aa25.22■■□□□ 1.63
RPUSD3-202ENST00000418713 WWC3Q9ULE0 1092 aa25.22■■□□□ 1.63
RPUSD3-202ENST00000418713 KIAA1551Q9HCM1 1747 aa25.22■■□□□ 1.63
RPUSD3-202ENST00000418713 ARHGAP27Q6ZUM4 889 aa25.21■■□□□ 1.63
RPUSD3-202ENST00000418713 TMX4Q9H1E5 349 aaPredicted RBP25.21■■□□□ 1.63
RPUSD3-202ENST00000418713 ARFGEF2Q9Y6D5 1785 aa25.21■■□□□ 1.63
RPUSD3-202ENST00000418713 PCCAP05165 728 aaPredicted RBP25.2■■□□□ 1.62
RPUSD3-202ENST00000418713 MRPL50Q8N5N7 158 aaKnown RBP25.2■■□□□ 1.62
RPUSD3-202ENST00000418713 LINS1Q8NG48 757 aa25.2■■□□□ 1.62
RPUSD3-202ENST00000418713 ADCY9O60503 1353 aa25.19■■□□□ 1.62
RPUSD3-202ENST00000418713 ANKRD31Q8N7Z5 1873 aa25.19■■□□□ 1.62
RPUSD3-202ENST00000418713 SSH1Q8WYL5 1049 aa25.19■■□□□ 1.62
RPUSD3-202ENST00000418713 SMC4Q9NTJ3 1288 aa25.19■■□□□ 1.62
RPUSD3-202ENST00000418713 BRCA1P38398 1863 aaKnown RBP25.18■■□□□ 1.62
RPUSD3-202ENST00000418713 YY1P25490 414 aa25.18■■□□□ 1.62
RPUSD3-202ENST00000418713 HOXA10P31260 410 aaPredicted RBP25.18■■□□□ 1.62
RPUSD3-202ENST00000418713 GRIPAP1Q4V328 841 aa25.18■■□□□ 1.62
RPUSD3-202ENST00000418713 FAM89AQ96GI7 184 aa25.18■■□□□ 1.62
RPUSD3-202ENST00000418713 CRAMP1Q96RY5 1269 aa25.18■■□□□ 1.62
RPUSD3-202ENST00000418713 IRS4O14654 1257 aaPredicted RBP25.17■■□□□ 1.62
RPUSD3-202ENST00000418713 BRPF1P55201 1214 aaPredicted RBP25.17■■□□□ 1.62
RPUSD3-202ENST00000418713 DLEC1Q9Y238 1755 aa25.17■■□□□ 1.62
RPUSD3-202ENST00000418713 ABCC12Q96J65 1359 aa25.17■■□□□ 1.62
RPUSD3-202ENST00000418713 NEURL1BA8MQ27 555 aa25.16■■□□□ 1.62
RPUSD3-202ENST00000418713 HCLS1P14317 486 aaPredicted RBP25.16■■□□□ 1.62
RPUSD3-202ENST00000418713 CC2D2BQ6DHV5 1058 aa25.16■■□□□ 1.62
RPUSD3-202ENST00000418713 DDX46Q7L014 1031 aaKnown RBP25.16■■□□□ 1.62
RPUSD3-202ENST00000418713 ARFGEF1Q9Y6D6 1849 aa25.16■■□□□ 1.62
RPUSD3-202ENST00000418713 CHD4Q14839 1912 aa25.16■■□□□ 1.62
RPUSD3-202ENST00000418713 IGKV5-2P06315 115 aa25.15■■□□□ 1.62
RPUSD3-202ENST00000418713 PRPF40BQ6NWY9 871 aaKnown RBP25.15■■□□□ 1.62
RPUSD3-202ENST00000418713 CDHR2Q9BYE9 1310 aa25.14■■□□□ 1.62
RPUSD3-202ENST00000418713 PDE8AO60658 829 aa25.14■■□□□ 1.62
RPUSD3-202ENST00000418713 ALDH1L1O75891 902 aa25.14■■□□□ 1.62
RPUSD3-202ENST00000418713 BBOX1O75936 387 aa25.14■■□□□ 1.62
RPUSD3-202ENST00000418713 SF3B3Q15393 1217 aaKnown RBP25.14■■□□□ 1.62
RPUSD3-202ENST00000418713 IPO8O15397 1037 aaKnown RBP25.13■■□□□ 1.61
RPUSD3-202ENST00000418713 GCKRQ14397 625 aa25.13■■□□□ 1.61
RPUSD3-202ENST00000418713 TMC4Q7Z404 712 aa25.13■■□□□ 1.61
RPUSD3-202ENST00000418713 C21orf2O43822 256 aa25.12■■□□□ 1.61
RPUSD3-202ENST00000418713 RARSP54136 660 aaKnown RBP25.12■■□□□ 1.61
RPUSD3-202ENST00000418713 CWF19L2Q2TBE0 894 aaKnown RBP25.12■■□□□ 1.61
RPUSD3-202ENST00000418713 SLC4A10Q6U841 1118 aa25.12■■□□□ 1.61
RPUSD3-202ENST00000418713 RTKN2Q8IZC4 609 aa25.12■■□□□ 1.61
RPUSD3-202ENST00000418713 SRCIN1Q9C0H9 1055 aa25.12■■□□□ 1.61
RPUSD3-202ENST00000418713 KIF16BQ96L93 1317 aa25.12■■□□□ 1.61
RPUSD3-202ENST00000418713 F6X3S4 739 aa25.11■■□□□ 1.61
RPUSD3-202ENST00000418713 CCDC152Q4G0S7 254 aa25.11■■□□□ 1.61
RPUSD3-202ENST00000418713 CCDC93Q567U6 631 aa25.11■■□□□ 1.61
RPUSD3-202ENST00000418713 RTL5Q5HYW3 569 aaPredicted RBP25.11■■□□□ 1.61
RPUSD3-202ENST00000418713 BEND3Q5T5X7 828 aa25.11■■□□□ 1.61
RPUSD3-202ENST00000418713 API5Q9BZZ5 524 aaKnown RBP25.11■■□□□ 1.61
RPUSD3-202ENST00000418713 H7C1W4 665 aa25.1■■□□□ 1.61
RPUSD3-202ENST00000418713 SYNE4Q8N205 404 aa25.1■■□□□ 1.61
RPUSD3-202ENST00000418713 ARHGAP45Q92619 1136 aa25.1■■□□□ 1.61
RPUSD3-202ENST00000418713 BCL2L13Q9BXK5 485 aa25.1■■□□□ 1.61
RPUSD3-202ENST00000418713 C9orf78Q9NZ63 289 aaPredicted RBP25.09■■□□□ 1.61
RPUSD3-202ENST00000418713 ZNF219Q9P2Y4 722 aaPredicted RBP25.08■■□□□ 1.61
RPUSD3-202ENST00000418713 COL11A2P13942 1736 aaPredicted RBP25.07■■□□□ 1.6
RPUSD3-202ENST00000418713 PPEF1O14829 653 aaPredicted RBP25.07■■□□□ 1.6
RPUSD3-202ENST00000418713 GRAPQ13588 217 aa25.07■■□□□ 1.6
RPUSD3-202ENST00000418713 GRAPLQ8TC17 118 aaPredicted RBP25.07■■□□□ 1.6
RPUSD3-202ENST00000418713 C7orf43Q8WVR3 580 aa25.07■■□□□ 1.6
RPUSD3-202ENST00000418713 NOB1Q9ULX3 412 aaKnown RBP25.07■■□□□ 1.6
RPUSD3-202ENST00000418713 C3orf67Q6ZVT6 689 aa25.06■■□□□ 1.6
RPUSD3-202ENST00000418713 UBE3BQ7Z3V4 1068 aa25.06■■□□□ 1.6
RPUSD3-202ENST00000418713 PLA2G12BQ9BX93 195 aa25.06■■□□□ 1.6
RPUSD3-202ENST00000418713 TAOK3Q9H2K8 898 aa25.06■■□□□ 1.6
RPUSD3-202ENST00000418713 LMNB1P20700 586 aa25.05■■□□□ 1.6
RPUSD3-202ENST00000418713 CCT4P50991 539 aaKnown RBP25.05■■□□□ 1.6
RPUSD3-202ENST00000418713 HDAC5Q9UQL6 1122 aa25.05■■□□□ 1.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms