RNA–Protein interactions for RNA: ENST00000418310.5

LIMK1-202, Transcript of LIM domain kinase 1, humanhuman

TSL 5 BASIC

Gene LIMK1, Length 3,360 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-202ENST00000418310 KAZALD1Q96I82 304 aa14.23□□□□□ -0.13
LIMK1-202ENST00000418310 CCDC171Q6TFL3 1326 aa14.23□□□□□ -0.13
LIMK1-202ENST00000418310 ST3GAL1Q11201 340 aa14.23□□□□□ -0.13
LIMK1-202ENST00000418310 SLFNL1Q499Z3 407 aa14.23□□□□□ -0.13
LIMK1-202ENST00000418310 CDC37L1Q7L3B6 337 aa14.23□□□□□ -0.13
LIMK1-202ENST00000418310 NFATC2IPQ8NCF5 419 aa14.23□□□□□ -0.13
LIMK1-202ENST00000418310 CABLES1Q8TDN4 633 aa14.23□□□□□ -0.13
LIMK1-202ENST00000418310 XAGE3Q8WTP9 111 aa14.23□□□□□ -0.13
LIMK1-202ENST00000418310 TPM2P07951 284 aa14.22□□□□□ -0.13
LIMK1-202ENST00000418310 CEBPZQ03701 1054 aaKnown RBP14.22□□□□□ -0.13
LIMK1-202ENST00000418310 COPS6Q7L5N1 327 aa14.22□□□□□ -0.13
LIMK1-202ENST00000418310 MTMR6Q9Y217 621 aa14.22□□□□□ -0.13
LIMK1-202ENST00000418310 CKAP2LQ8IYA6 745 aa14.22□□□□□ -0.13
LIMK1-202ENST00000418310 KIF13AQ9H1H9 1805 aa14.22□□□□□ -0.13
LIMK1-202ENST00000418310 KCNH5Q8NCM2 988 aa14.22□□□□□ -0.13
LIMK1-202ENST00000418310 DDX11Q96FC9 970 aa14.22□□□□□ -0.13
LIMK1-202ENST00000418310 SEC62Q99442 399 aaKnown RBP14.22□□□□□ -0.13
LIMK1-202ENST00000418310 BCL11BQ9C0K0 894 aaPredicted RBP14.22□□□□□ -0.13
LIMK1-202ENST00000418310 TTC41PQ6P2S7 1318 aa14.21□□□□□ -0.13
LIMK1-202ENST00000418310 CHRNA2Q15822 529 aa14.21□□□□□ -0.13
LIMK1-202ENST00000418310 ANKLE2Q86XL3 938 aa14.21□□□□□ -0.13
LIMK1-202ENST00000418310 EVI5LQ96CN4 794 aa14.21□□□□□ -0.13
LIMK1-202ENST00000418310 BABAM1Q9NWV8 329 aa14.21□□□□□ -0.13
LIMK1-202ENST00000418310 RRP9O43818 475 aaKnown RBP14.21□□□□□ -0.13
LIMK1-202ENST00000418310 IGKV5-2P06315 115 aa14.21□□□□□ -0.13
LIMK1-202ENST00000418310 UBE2HP62256 183 aa14.21□□□□□ -0.13
LIMK1-202ENST00000418310 HSP90B1P14625 803 aaKnown RBP14.2□□□□□ -0.14
LIMK1-202ENST00000418310 SLC27A2O14975 620 aa14.2□□□□□ -0.14
LIMK1-202ENST00000418310 DDX58O95786 925 aaKnown RBP14.2□□□□□ -0.14
LIMK1-202ENST00000418310 BLOC1S2Q6QNY1 142 aa14.2□□□□□ -0.14
LIMK1-202ENST00000418310 UBE3BQ7Z3V4 1068 aa14.2□□□□□ -0.14
LIMK1-202ENST00000418310 LINS1Q8NG48 757 aa14.2□□□□□ -0.14
LIMK1-202ENST00000418310 FGD1P98174 961 aa14.2□□□□□ -0.14
LIMK1-202ENST00000418310 ZNF330Q9Y3S2 320 aaPredicted RBP14.2□□□□□ -0.14
LIMK1-202ENST00000418310 NEXNQ0ZGT2 675 aa14.19□□□□□ -0.14
LIMK1-202ENST00000418310 DDX46Q7L014 1031 aaKnown RBP14.19□□□□□ -0.14
LIMK1-202ENST00000418310 RAPGEF4Q8WZA2 1011 aa14.19□□□□□ -0.14
LIMK1-202ENST00000418310 USP16Q9Y5T5 823 aa14.19□□□□□ -0.14
LIMK1-202ENST00000418310 ZNF500O60304 480 aaPredicted RBP14.19□□□□□ -0.14
LIMK1-202ENST00000418310 KIAA2012Q0VF49 1180 aa14.19□□□□□ -0.14
LIMK1-202ENST00000418310 NECTIN1Q15223 517 aa14.19□□□□□ -0.14
LIMK1-202ENST00000418310 AMOTQ4VCS5 1084 aa14.19□□□□□ -0.14
LIMK1-202ENST00000418310 ARHGEF25Q86VW2 580 aa14.19□□□□□ -0.14
LIMK1-202ENST00000418310 PXDNLA1KZ92 1463 aa14.19□□□□□ -0.14
LIMK1-202ENST00000418310 GOLGA6L4A6NEF3 574 aa14.19□□□□□ -0.14
LIMK1-202ENST00000418310 JAK2O60674 1132 aa14.19□□□□□ -0.14
LIMK1-202ENST00000418310 ALDH1L1O75891 902 aa14.19□□□□□ -0.14
LIMK1-202ENST00000418310 VPS53Q5VIR6 699 aa14.19□□□□□ -0.14
LIMK1-202ENST00000418310 ERC1Q8IUD2 1116 aa14.19□□□□□ -0.14
LIMK1-202ENST00000418310 ZSWIM6Q9HCJ5 1215 aa14.19□□□□□ -0.14
LIMK1-202ENST00000418310 LIG1P18858 919 aa14.18□□□□□ -0.14
LIMK1-202ENST00000418310 TTC6Q86TZ1 520 aa14.18□□□□□ -0.14
LIMK1-202ENST00000418310 ZNF496Q96IT1 587 aaPredicted RBP14.18□□□□□ -0.14
LIMK1-202ENST00000418310 ATP6V1DQ9Y5K8 247 aa14.18□□□□□ -0.14
LIMK1-202ENST00000418310 ANKARQ7Z5J8 1434 aa14.18□□□□□ -0.14
LIMK1-202ENST00000418310 HOXB7P09629 217 aa14.18□□□□□ -0.14
LIMK1-202ENST00000418310 HS1BP3Q53T59 392 aa14.18□□□□□ -0.14
LIMK1-202ENST00000418310 LARP1Q6PKG0 1096 aaKnown RBP14.18□□□□□ -0.14
LIMK1-202ENST00000418310 LRRC37A3O60309 1634 aa14.17□□□□□ -0.14
LIMK1-202ENST00000418310 TFCP2Q12800 502 aa14.17□□□□□ -0.14
LIMK1-202ENST00000418310 GLIPR1L2Q4G1C9 344 aa14.17□□□□□ -0.14
LIMK1-202ENST00000418310 KRT28Q7Z3Y7 464 aa14.17□□□□□ -0.14
LIMK1-202ENST00000418310 FBXW7Q969H0 707 aa14.17□□□□□ -0.14
LIMK1-202ENST00000418310 NEUROD6Q96NK8 337 aa14.17□□□□□ -0.14
LIMK1-202ENST00000418310 DDX21Q9NR30 783 aaKnown RBP eCLIP14.17□□□□□ -0.14
LIMK1-202ENST00000418310 RGPD2P0DJD1 1756 aa14.17□□□□□ -0.14
LIMK1-202ENST00000418310 ZNF790Q6PG37 636 aa14.17□□□□□ -0.14
LIMK1-202ENST00000418310 AP5Z1O43299 807 aa14.17□□□□□ -0.14
LIMK1-202ENST00000418310 ARHGAP23Q9P227 1491 aa14.17□□□□□ -0.14
LIMK1-202ENST00000418310 CCDC85AQ96PX6 553 aaPredicted RBP14.16□□□□□ -0.14
LIMK1-202ENST00000418310 MTX1Q13505 466 aa14.16□□□□□ -0.14
LIMK1-202ENST00000418310 PDIA6Q15084 440 aa14.16□□□□□ -0.14
LIMK1-202ENST00000418310 DBNDD2Q9BQY9 259 aa14.16□□□□□ -0.14
LIMK1-202ENST00000418310 NEURL1BA8MQ27 555 aa14.16□□□□□ -0.14
LIMK1-202ENST00000418310 LTN1O94822 1766 aa14.15□□□□□ -0.14
LIMK1-202ENST00000418310 SLIT1O75093 1534 aa14.15□□□□□ -0.14
LIMK1-202ENST00000418310 CHST3Q7LGC8 479 aa14.15□□□□□ -0.14
LIMK1-202ENST00000418310 LUZP1Q86V48 1076 aa14.15□□□□□ -0.14
LIMK1-202ENST00000418310 TTC5Q8N0Z6 440 aa14.15□□□□□ -0.14
LIMK1-202ENST00000418310 BICD2Q8TD16 824 aa14.15□□□□□ -0.14
LIMK1-202ENST00000418310 MAP4K1Q92918 833 aa14.15□□□□□ -0.14
LIMK1-202ENST00000418310 DBNLQ9UJU6 430 aaKnown RBP14.15□□□□□ -0.14
LIMK1-202ENST00000418310 A0A087WWV3 80 aa14.15□□□□□ -0.14
LIMK1-202ENST00000418310 KRT85P78386 507 aa14.15□□□□□ -0.14
LIMK1-202ENST00000418310 GCKRQ14397 625 aa14.15□□□□□ -0.14
LIMK1-202ENST00000418310 PROSER2Q86WR7 435 aaPredicted RBP14.15□□□□□ -0.14
LIMK1-202ENST00000418310 SH2B1Q9NRF2 756 aaPredicted RBP14.15□□□□□ -0.14
LIMK1-202ENST00000418310 DACT1Q9NYF0 836 aa14.15□□□□□ -0.14
LIMK1-202ENST00000418310 A0A087WZG4 1122 aa14.14□□□□□ -0.15
LIMK1-202ENST00000418310 GUCY1B3Q02153 619 aa14.14□□□□□ -0.15
LIMK1-202ENST00000418310 ZSCAN31Q96LW9 406 aaPredicted RBP14.14□□□□□ -0.15
LIMK1-202ENST00000418310 TUBGCP6Q96RT7 1819 aa14.14□□□□□ -0.15
LIMK1-202ENST00000418310 RNF20Q5VTR2 975 aa14.14□□□□□ -0.15
LIMK1-202ENST00000418310 DRC7Q8IY82 874 aa14.14□□□□□ -0.15
LIMK1-202ENST00000418310 PSMA5P28066 241 aa14.14□□□□□ -0.15
LIMK1-202ENST00000418310 ANKRD13DQ6ZTN6 518 aa14.14□□□□□ -0.15
LIMK1-202ENST00000418310 SPATA32Q96LK8 384 aa14.14□□□□□ -0.15
LIMK1-202ENST00000418310 CHMP4AQ9BY43 222 aa14.14□□□□□ -0.15
LIMK1-202ENST00000418310 KDM4AO75164 1064 aa14.13□□□□□ -0.15
LIMK1-202ENST00000418310 CSPP1Q1MSJ5 1256 aa14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms