RNA–Protein interactions for RNA: ENST00000418188.1

CSPG4P3Y-201, Transcript of CSPG4 pseudogene 3 Y-linked, humanhuman

BASIC

Gene CSPG4P3Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P3Y-201ENST00000418188 PDIA4P13667 645 aaKnown RBP13.96□□□□□ -0.17
CSPG4P3Y-201ENST00000418188 AXIN2Q9Y2T1 843 aa13.96□□□□□ -0.17
CSPG4P3Y-201ENST00000418188 CHMP3Q9Y3E7 222 aa13.96□□□□□ -0.17
CSPG4P3Y-201ENST00000418188 R3HCC1Q9Y3T6 440 aaKnown RBP13.96□□□□□ -0.17
CSPG4P3Y-201ENST00000418188 NECAB1Q8N987 351 aa13.95□□□□□ -0.18
CSPG4P3Y-201ENST00000418188 ANKRD13DQ6ZTN6 518 aa13.95□□□□□ -0.18
CSPG4P3Y-201ENST00000418188 SASH1O94885 1247 aa13.95□□□□□ -0.18
CSPG4P3Y-201ENST00000418188 KLHDC4Q8TBB5 520 aa13.95□□□□□ -0.18
CSPG4P3Y-201ENST00000418188 ATF3P18847 181 aa13.94□□□□□ -0.18
CSPG4P3Y-201ENST00000418188 DNM1Q05193 864 aaKnown RBP13.94□□□□□ -0.18
CSPG4P3Y-201ENST00000418188 NFAT5O94916 1531 aa13.94□□□□□ -0.18
CSPG4P3Y-201ENST00000418188 KRT85P78386 507 aa13.94□□□□□ -0.18
CSPG4P3Y-201ENST00000418188 IFNL2Q8IZJ0 200 aa13.94□□□□□ -0.18
CSPG4P3Y-201ENST00000418188 SLC52A2Q9HAB3 445 aa13.94□□□□□ -0.18
CSPG4P3Y-201ENST00000418188 GCKRQ14397 625 aa13.94□□□□□ -0.18
CSPG4P3Y-201ENST00000418188 UVSSAQ2YD98 709 aa13.94□□□□□ -0.18
CSPG4P3Y-201ENST00000418188 TMEM87AQ8NBN3 555 aa13.94□□□□□ -0.18
CSPG4P3Y-201ENST00000418188 RPAP1Q9BWH6 1393 aaPredicted RBP13.94□□□□□ -0.18
CSPG4P3Y-201ENST00000418188 LTN1O94822 1766 aa13.94□□□□□ -0.18
CSPG4P3Y-201ENST00000418188 ERBB3P21860 1342 aa13.94□□□□□ -0.18
CSPG4P3Y-201ENST00000418188 LARGE1O95461 756 aa13.93□□□□□ -0.18
CSPG4P3Y-201ENST00000418188 NECTIN1Q15223 517 aa13.93□□□□□ -0.18
CSPG4P3Y-201ENST00000418188 NEURL1BA8MQ27 555 aa13.93□□□□□ -0.18
CSPG4P3Y-201ENST00000418188 SNRPA1P09661 255 aaKnown RBP13.93□□□□□ -0.18
CSPG4P3Y-201ENST00000418188 HSP90B1P14625 803 aaKnown RBP13.93□□□□□ -0.18
CSPG4P3Y-201ENST00000418188 MAP4K1Q92918 833 aa13.93□□□□□ -0.18
CSPG4P3Y-201ENST00000418188 DNAJC2Q99543 621 aaKnown RBP13.93□□□□□ -0.18
CSPG4P3Y-201ENST00000418188 USP25Q9UHP3 1055 aa13.93□□□□□ -0.18
CSPG4P3Y-201ENST00000418188 NPHP3Q7Z494 1330 aa13.93□□□□□ -0.18
CSPG4P3Y-201ENST00000418188 DTNBO60941 627 aa13.93□□□□□ -0.18
CSPG4P3Y-201ENST00000418188 HCLS1P14317 486 aaPredicted RBP13.93□□□□□ -0.18
CSPG4P3Y-201ENST00000418188 ME3Q16798 604 aa13.93□□□□□ -0.18
CSPG4P3Y-201ENST00000418188 FERMT3Q86UX7 667 aa13.93□□□□□ -0.18
CSPG4P3Y-201ENST00000418188 METTL22Q9BUU2 404 aaPredicted RBP13.93□□□□□ -0.18
CSPG4P3Y-201ENST00000418188 CCDC9Q9Y3X0 531 aaKnown RBP13.93□□□□□ -0.18
CSPG4P3Y-201ENST00000418188 PXDNQ92626 1479 aa13.93□□□□□ -0.18
CSPG4P3Y-201ENST00000418188 SLC27A2O14975 620 aa13.92□□□□□ -0.18
CSPG4P3Y-201ENST00000418188 TCEANC2Q96MN5 208 aa13.92□□□□□ -0.18
CSPG4P3Y-201ENST00000418188 RRP9O43818 475 aaKnown RBP13.92□□□□□ -0.18
CSPG4P3Y-201ENST00000418188 ZNF500O60304 480 aaPredicted RBP13.92□□□□□ -0.18
CSPG4P3Y-201ENST00000418188 IGKV5-2P06315 115 aa13.92□□□□□ -0.18
CSPG4P3Y-201ENST00000418188 STK3Q13188 491 aa13.92□□□□□ -0.18
CSPG4P3Y-201ENST00000418188 KRT32Q14532 448 aa13.92□□□□□ -0.18
CSPG4P3Y-201ENST00000418188 UBE3BQ7Z3V4 1068 aa13.92□□□□□ -0.18
CSPG4P3Y-201ENST00000418188 JARID2Q92833 1246 aaPredicted RBP13.92□□□□□ -0.18
CSPG4P3Y-201ENST00000418188 FMNL2Q96PY5 1086 aa13.92□□□□□ -0.18
CSPG4P3Y-201ENST00000418188 TLR7Q9NYK1 1049 aaKnown RBP13.92□□□□□ -0.18
CSPG4P3Y-201ENST00000418188 HMG20BQ9P0W2 317 aa13.92□□□□□ -0.18
CSPG4P3Y-201ENST00000418188 MTMR6Q9Y217 621 aa13.92□□□□□ -0.18
CSPG4P3Y-201ENST00000418188 OVOS2A0A0G2JMS6 1433 aa13.92□□□□□ -0.18
CSPG4P3Y-201ENST00000418188 ZNF496Q96IT1 587 aaPredicted RBP13.92□□□□□ -0.18
CSPG4P3Y-201ENST00000418188 C19orf44Q9H6X5 657 aa13.92□□□□□ -0.18
CSPG4P3Y-201ENST00000418188 A0A0D9SFI3 127 aa13.91□□□□□ -0.18
CSPG4P3Y-201ENST00000418188 CABP4P57796 275 aa13.91□□□□□ -0.18
CSPG4P3Y-201ENST00000418188 A0A087WZG4 1122 aa13.91□□□□□ -0.18
CSPG4P3Y-201ENST00000418188 PIP4K2AP48426 406 aaPredicted RBP13.91□□□□□ -0.18
CSPG4P3Y-201ENST00000418188 GIMAP6Q6P9H5 292 aa13.91□□□□□ -0.18
CSPG4P3Y-201ENST00000418188 MPNDQ8N594 471 aa13.91□□□□□ -0.18
CSPG4P3Y-201ENST00000418188 PHKG2P15735 406 aa13.9□□□□□ -0.18
CSPG4P3Y-201ENST00000418188 KAZALD1Q96I82 304 aa13.9□□□□□ -0.18
CSPG4P3Y-201ENST00000418188 TPCN1Q9ULQ1 816 aa13.9□□□□□ -0.18
CSPG4P3Y-201ENST00000418188 UTYO14607 1347 aa13.9□□□□□ -0.18
CSPG4P3Y-201ENST00000418188 NPHP4O75161 1426 aaPredicted RBP13.9□□□□□ -0.18
CSPG4P3Y-201ENST00000418188 ATP5J2-PTCD1G3V325 749 aa13.9□□□□□ -0.18
CSPG4P3Y-201ENST00000418188 H3BQV1 296 aa13.9□□□□□ -0.18
CSPG4P3Y-201ENST00000418188 PTCD1O75127 700 aaKnown RBP13.9□□□□□ -0.18
CSPG4P3Y-201ENST00000418188 CCDC192P0DO97 292 aa13.9□□□□□ -0.18
CSPG4P3Y-201ENST00000418188 IFFO2Q5TF58 517 aa13.9□□□□□ -0.18
CSPG4P3Y-201ENST00000418188 NEUROD6Q96NK8 337 aa13.9□□□□□ -0.18
CSPG4P3Y-201ENST00000418188 MED1Q15648 1581 aaPredicted RBP13.9□□□□□ -0.18
CSPG4P3Y-201ENST00000418188 DCAF5Q96JK2 942 aa13.89□□□□□ -0.19
CSPG4P3Y-201ENST00000418188 ADCY5O95622 1261 aa13.89□□□□□ -0.19
CSPG4P3Y-201ENST00000418188 RPS6KB1P23443 525 aa13.89□□□□□ -0.19
CSPG4P3Y-201ENST00000418188 PDIA6Q15084 440 aa13.89□□□□□ -0.19
CSPG4P3Y-201ENST00000418188 NAP1L2Q9ULW6 460 aaPredicted RBP13.89□□□□□ -0.19
CSPG4P3Y-201ENST00000418188 USP16Q9Y5T5 823 aa13.89□□□□□ -0.19
CSPG4P3Y-201ENST00000418188 HEG1Q9ULI3 1381 aa13.89□□□□□ -0.19
CSPG4P3Y-201ENST00000418188 SCAND2PQ9GZW5 306 aaPredicted RBP13.89□□□□□ -0.19
CSPG4P3Y-201ENST00000418188 TFCP2Q12800 502 aa13.88□□□□□ -0.19
CSPG4P3Y-201ENST00000418188 TNNI3KQ59H18 835 aa13.88□□□□□ -0.19
CSPG4P3Y-201ENST00000418188 KCNB2Q92953 911 aa13.88□□□□□ -0.19
CSPG4P3Y-201ENST00000418188 EDC3Q96F86 508 aaKnown RBP13.88□□□□□ -0.19
CSPG4P3Y-201ENST00000418188 COPRSQ9NQ92 184 aa13.88□□□□□ -0.19
CSPG4P3Y-201ENST00000418188 FPGT-TNNI3KV9GXZ4 949 aa13.88□□□□□ -0.19
CSPG4P3Y-201ENST00000418188 CHRNA2Q15822 529 aa13.88□□□□□ -0.19
CSPG4P3Y-201ENST00000418188 SPATA32Q96LK8 384 aa13.88□□□□□ -0.19
CSPG4P3Y-201ENST00000418188 NEK1Q96PY6 1258 aa13.88□□□□□ -0.19
CSPG4P3Y-201ENST00000418188 NUP62CLQ9H1M0 184 aa13.88□□□□□ -0.19
CSPG4P3Y-201ENST00000418188 GOLGA6L6A8MZA4 724 aa13.87□□□□□ -0.19
CSPG4P3Y-201ENST00000418188 ATP5JP18859 108 aa13.87□□□□□ -0.19
CSPG4P3Y-201ENST00000418188 EPHA10Q5JZY3 1008 aa13.87□□□□□ -0.19
CSPG4P3Y-201ENST00000418188 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.87□□□□□ -0.19
CSPG4P3Y-201ENST00000418188 U3KPZ7 1027 aaPredicted RBP13.87□□□□□ -0.19
CSPG4P3Y-201ENST00000418188 USP54Q70EL1 1684 aa13.87□□□□□ -0.19
CSPG4P3Y-201ENST00000418188 BICD2Q8TD16 824 aa13.87□□□□□ -0.19
CSPG4P3Y-201ENST00000418188 MARF1Q9Y4F3 1742 aaKnown RBP13.87□□□□□ -0.19
CSPG4P3Y-201ENST00000418188 TERF1P54274 439 aa13.87□□□□□ -0.19
CSPG4P3Y-201ENST00000418188 MAP3K11Q16584 847 aa13.87□□□□□ -0.19
CSPG4P3Y-201ENST00000418188 ZNF589Q86UQ0 364 aaPredicted RBP13.87□□□□□ -0.19
CSPG4P3Y-201ENST00000418188 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms