RNA–Protein interactions for RNA: ENST00000418006.1

LINC00940-201, long intergenic non-protein coding RNA 940, humanhuman

TSL 2 BASIC

Gene LINC00940, Length 2,350 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00940-201ENST00000418006 KLHDC4Q8TBB5 520 aa16.78■□□□□ 0.28
LINC00940-201ENST00000418006 C8orf37Q96NL8 207 aa16.78■□□□□ 0.28
LINC00940-201ENST00000418006 SPATA31A1Q5TZJ5 1347 aa16.78■□□□□ 0.28
LINC00940-201ENST00000418006 DISP2A7MBM2 1401 aa16.78■□□□□ 0.28
LINC00940-201ENST00000418006 A0A087WZG4 1122 aa16.78■□□□□ 0.28
LINC00940-201ENST00000418006 RAB11FIP3O75154 756 aa16.78■□□□□ 0.28
LINC00940-201ENST00000418006 EPHA10Q5JZY3 1008 aa16.78■□□□□ 0.28
LINC00940-201ENST00000418006 NOL7Q9UMY1 257 aaKnown RBP16.78■□□□□ 0.28
LINC00940-201ENST00000418006 ZNF500O60304 480 aaPredicted RBP16.77■□□□□ 0.28
LINC00940-201ENST00000418006 KIF1BPQ96EK5 621 aa16.77■□□□□ 0.28
LINC00940-201ENST00000418006 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.77■□□□□ 0.28
LINC00940-201ENST00000418006 HDAC5Q9UQL6 1122 aa16.77■□□□□ 0.28
LINC00940-201ENST00000418006 GLI3P10071 1580 aa16.77■□□□□ 0.28
LINC00940-201ENST00000418006 ZSCAN23Q3MJ62 389 aa16.75■□□□□ 0.27
LINC00940-201ENST00000418006 CASC1Q6TDU7 716 aa16.75■□□□□ 0.27
LINC00940-201ENST00000418006 NGLY1Q96IV0 654 aa16.75■□□□□ 0.27
LINC00940-201ENST00000418006 PLCH1Q4KWH8 1693 aa16.75■□□□□ 0.27
LINC00940-201ENST00000418006 UQCRHLA0A096LP55 91 aa16.75■□□□□ 0.27
LINC00940-201ENST00000418006 UQCRHP07919 91 aa16.75■□□□□ 0.27
LINC00940-201ENST00000418006 MTX1Q13505 466 aa16.75■□□□□ 0.27
LINC00940-201ENST00000418006 CAVIN1Q6NZI2 390 aaKnown RBP16.75■□□□□ 0.27
LINC00940-201ENST00000418006 PDLIM2Q96JY6 352 aa16.75■□□□□ 0.27
LINC00940-201ENST00000418006 RBSNQ9H1K0 784 aa16.75■□□□□ 0.27
LINC00940-201ENST00000418006 OSBPL3Q9H4L5 887 aa16.75■□□□□ 0.27
LINC00940-201ENST00000418006 CHMP3Q9Y3E7 222 aa16.75■□□□□ 0.27
LINC00940-201ENST00000418006 UTYO14607 1347 aa16.75■□□□□ 0.27
LINC00940-201ENST00000418006 SALL3Q9BXA9 1300 aa16.75■□□□□ 0.27
LINC00940-201ENST00000418006 HSP90AB4PQ58FF6 505 aa16.74■□□□□ 0.27
LINC00940-201ENST00000418006 MCTP1Q6DN14 999 aa16.74■□□□□ 0.27
LINC00940-201ENST00000418006 TNS2Q63HR2 1409 aa16.74■□□□□ 0.27
LINC00940-201ENST00000418006 NCLP19338 710 aaKnown RBP16.74■□□□□ 0.27
LINC00940-201ENST00000418006 LAMB4A4D0S4 1761 aa16.74■□□□□ 0.27
LINC00940-201ENST00000418006 UBR2Q8IWV8 1755 aa16.74■□□□□ 0.27
LINC00940-201ENST00000418006 STARD3NLO95772 234 aa16.73■□□□□ 0.27
LINC00940-201ENST00000418006 UNC5CLQ8IV45 518 aa16.73■□□□□ 0.27
LINC00940-201ENST00000418006 G3BP1Q13283 466 aaKnown RBP eCLIP16.73■□□□□ 0.27
LINC00940-201ENST00000418006 FAM98CQ17RN3 349 aaKnown RBP16.73■□□□□ 0.27
LINC00940-201ENST00000418006 SLC4A9Q96Q91 983 aa16.73■□□□□ 0.27
LINC00940-201ENST00000418006 CLASRPQ8N2M8 674 aaKnown RBP16.72■□□□□ 0.27
LINC00940-201ENST00000418006 LMBRD1Q9NUN5 540 aa16.72■□□□□ 0.27
LINC00940-201ENST00000418006 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP16.72■□□□□ 0.27
LINC00940-201ENST00000418006 SPATA31A5Q5VU36 1347 aa16.72■□□□□ 0.27
LINC00940-201ENST00000418006 SPATA31A7Q8IWB4 1347 aa16.72■□□□□ 0.27
LINC00940-201ENST00000418006 MARCH10Q8NA82 808 aaPredicted RBP16.72■□□□□ 0.27
LINC00940-201ENST00000418006 BCL9O00512 1426 aa16.72■□□□□ 0.27
LINC00940-201ENST00000418006 PAPPAQ13219 1627 aa16.71■□□□□ 0.27
LINC00940-201ENST00000418006 ARFGEF2Q9Y6D5 1785 aa16.71■□□□□ 0.27
LINC00940-201ENST00000418006 ITGB4P16144 1822 aa16.71■□□□□ 0.27
LINC00940-201ENST00000418006 THRAP3Q9Y2W1 955 aaKnown RBP16.71■□□□□ 0.27
LINC00940-201ENST00000418006 AACSQ86V21 672 aa16.71■□□□□ 0.26
LINC00940-201ENST00000418006 TEX13AQ9BXU3 409 aaPredicted RBP16.71■□□□□ 0.26
LINC00940-201ENST00000418006 CWC25Q9NXE8 425 aaPredicted RBP16.71■□□□□ 0.26
LINC00940-201ENST00000418006 STAP2Q9UGK3 403 aa16.71■□□□□ 0.26
LINC00940-201ENST00000418006 ZKSCAN5Q9Y2L8 839 aa16.71■□□□□ 0.26
LINC00940-201ENST00000418006 AFDNP55196 1824 aaKnown RBP16.7■□□□□ 0.26
LINC00940-201ENST00000418006 IFIT2P09913 472 aaKnown RBP16.7■□□□□ 0.26
LINC00940-201ENST00000418006 CDCA7Q9BWT1 371 aaPredicted RBP16.7■□□□□ 0.26
LINC00940-201ENST00000418006 CCDC8Q9H0W5 538 aaPredicted RBP16.7■□□□□ 0.26
LINC00940-201ENST00000418006 DYNC1I1O14576 645 aa16.7■□□□□ 0.26
LINC00940-201ENST00000418006 SASH1O94885 1247 aa16.7■□□□□ 0.26
LINC00940-201ENST00000418006 LMBR1LQ6UX01 489 aa16.7■□□□□ 0.26
LINC00940-201ENST00000418006 KIF6Q6ZMV9 814 aa16.7■□□□□ 0.26
LINC00940-201ENST00000418006 CYP2E1P05181 493 aaPredicted RBP16.69■□□□□ 0.26
LINC00940-201ENST00000418006 NUCB2P80303 420 aa16.69■□□□□ 0.26
LINC00940-201ENST00000418006 CSPP1Q1MSJ5 1256 aa16.69■□□□□ 0.26
LINC00940-201ENST00000418006 MTERF4Q7Z6M4 381 aaKnown RBP16.69■□□□□ 0.26
LINC00940-201ENST00000418006 PODXL2Q9NZ53 605 aa16.69■□□□□ 0.26
LINC00940-201ENST00000418006 ERC1Q8IUD2 1116 aa16.69■□□□□ 0.26
LINC00940-201ENST00000418006 SMAP1Q8IYB5 467 aaPredicted RBP16.69■□□□□ 0.26
LINC00940-201ENST00000418006 ZBTB1Q9Y2K1 713 aa16.69■□□□□ 0.26
LINC00940-201ENST00000418006 PI4K2BQ8TCG2 481 aa16.68■□□□□ 0.26
LINC00940-201ENST00000418006 KCNQ2O43526 872 aa16.67■□□□□ 0.26
LINC00940-201ENST00000418006 CYP19A1P11511 503 aaPredicted RBP16.67■□□□□ 0.26
LINC00940-201ENST00000418006 GPTP24298 496 aa16.67■□□□□ 0.26
LINC00940-201ENST00000418006 AEBP2Q6ZN18 517 aaPredicted RBP16.67■□□□□ 0.26
LINC00940-201ENST00000418006 CCDC85AQ96PX6 553 aaPredicted RBP16.67■□□□□ 0.26
LINC00940-201ENST00000418006 USP26Q9BXU7 913 aa16.67■□□□□ 0.26
LINC00940-201ENST00000418006 NRAPQ86VF7 1730 aa16.67■□□□□ 0.26
LINC00940-201ENST00000418006 ERC2O15083 957 aa16.67■□□□□ 0.26
LINC00940-201ENST00000418006 MCM5P33992 734 aa16.67■□□□□ 0.26
LINC00940-201ENST00000418006 PKP1Q13835 747 aa16.67■□□□□ 0.26
LINC00940-201ENST00000418006 ARID3AQ99856 593 aa16.67■□□□□ 0.26
LINC00940-201ENST00000418006 TLR7Q9NYK1 1049 aaKnown RBP16.67■□□□□ 0.26
LINC00940-201ENST00000418006 H7C1W4 665 aa16.66■□□□□ 0.26
LINC00940-201ENST00000418006 CASP7P55210 303 aa16.66■□□□□ 0.26
LINC00940-201ENST00000418006 RABEP1Q15276 862 aa16.66■□□□□ 0.26
LINC00940-201ENST00000418006 HLFQ16534 295 aa16.66■□□□□ 0.26
LINC00940-201ENST00000418006 EAF2Q96CJ1 260 aaPredicted RBP16.66■□□□□ 0.26
LINC00940-201ENST00000418006 RBM27Q9P2N5 1060 aaKnown RBP16.66■□□□□ 0.26
LINC00940-201ENST00000418006 TBC1D2BQ9UPU7 963 aa16.66■□□□□ 0.26
LINC00940-201ENST00000418006 SLIT2O94813 1529 aa16.66■□□□□ 0.26
LINC00940-201ENST00000418006 CHMLP26374 656 aa16.66■□□□□ 0.26
LINC00940-201ENST00000418006 ATP6V1AP38606 617 aa16.66■□□□□ 0.26
LINC00940-201ENST00000418006 SASS6Q6UVJ0 657 aa16.66■□□□□ 0.26
LINC00940-201ENST00000418006 CCDC191Q8NCU4 936 aa16.66■□□□□ 0.26
LINC00940-201ENST00000418006 GPT2Q8TD30 523 aa16.66■□□□□ 0.26
LINC00940-201ENST00000418006 PTPN12Q05209 780 aaKnown RBP16.65■□□□□ 0.26
LINC00940-201ENST00000418006 TCIRG1Q13488 830 aa16.65■□□□□ 0.26
LINC00940-201ENST00000418006 FAM89AQ96GI7 184 aa16.65■□□□□ 0.26
LINC00940-201ENST00000418006 DOT1LQ8TEK3 1739 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms