RNA–Protein interactions for RNA: ENST00000417652.5

NCL-203, Transcript of nucleolin, humanhuman

TSL 4

Gene NCL, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-203ENST00000417652 NLRP3Q96P20 1036 aa8.78□□□□□ -1
NCL-203ENST00000417652 TMX4Q9H1E5 349 aaPredicted RBP8.78□□□□□ -1
NCL-203ENST00000417652 ZNF219Q9P2Y4 722 aaPredicted RBP8.78□□□□□ -1
NCL-203ENST00000417652 MAP3K2Q9Y2U5 619 aa8.78□□□□□ -1
NCL-203ENST00000417652 C10orf71Q711Q0 1435 aa8.78□□□□□ -1
NCL-203ENST00000417652 AFDNP55196 1824 aaKnown RBP8.77□□□□□ -1
NCL-203ENST00000417652 HSP90B1P14625 803 aaKnown RBP8.77□□□□□ -1.01
NCL-203ENST00000417652 FLIIQ13045 1269 aa8.77□□□□□ -1.01
NCL-203ENST00000417652 RTL5Q5HYW3 569 aaPredicted RBP8.77□□□□□ -1.01
NCL-203ENST00000417652 G2E3Q7L622 706 aa8.77□□□□□ -1.01
NCL-203ENST00000417652 NLRP10Q86W26 655 aa8.77□□□□□ -1.01
NCL-203ENST00000417652 CNKSR1Q969H4 720 aa8.77□□□□□ -1.01
NCL-203ENST00000417652 SCN7AQ01118 1682 aa8.77□□□□□ -1.01
NCL-203ENST00000417652 SH3TC1Q8TE82 1336 aa8.77□□□□□ -1.01
NCL-203ENST00000417652 BCORQ6W2J9 1755 aa8.76□□□□□ -1.01
NCL-203ENST00000417652 N4BP2Q86UW6 1770 aaPredicted RBP8.76□□□□□ -1.01
NCL-203ENST00000417652 NPR1P16066 1061 aa8.76□□□□□ -1.01
NCL-203ENST00000417652 YBX3P16989 372 aaKnown RBP eCLIP8.76□□□□□ -1.016e-16■■■□□ 15.7
NCL-203ENST00000417652 ALDH1B1P30837 517 aa8.76□□□□□ -1.01
NCL-203ENST00000417652 SLC4A10Q6U841 1118 aa8.76□□□□□ -1.01
NCL-203ENST00000417652 FAM89AQ96GI7 184 aa8.76□□□□□ -1.01
NCL-203ENST00000417652 MASTLQ96GX5 879 aa8.76□□□□□ -1.01
NCL-203ENST00000417652 RBM17Q96I25 401 aaKnown RBP8.76□□□□□ -1.01
NCL-203ENST00000417652 METTL22Q9BUU2 404 aaPredicted RBP8.76□□□□□ -1.01
NCL-203ENST00000417652 SMC4Q9NTJ3 1288 aa8.76□□□□□ -1.01
NCL-203ENST00000417652 CWC25Q9NXE8 425 aaPredicted RBP8.76□□□□□ -1.01
NCL-203ENST00000417652 ATP10DQ9P241 1426 aa8.76□□□□□ -1.01
NCL-203ENST00000417652 UBN2Q6ZU65 1347 aa8.76□□□□□ -1.01
NCL-203ENST00000417652 CACNA1FO60840 1977 aa8.75□□□□□ -1.01
NCL-203ENST00000417652 NTSR2O95665 410 aa8.75□□□□□ -1.01
NCL-203ENST00000417652 CT47B1P0C2W7 299 aaPredicted RBP8.75□□□□□ -1.01
NCL-203ENST00000417652 SRGNP10124 158 aa8.75□□□□□ -1.01
NCL-203ENST00000417652 HCLS1P14317 486 aaPredicted RBP8.75□□□□□ -1.01
NCL-203ENST00000417652 KCNA3P22001 575 aa8.75□□□□□ -1.01
NCL-203ENST00000417652 YY1P25490 414 aa8.75□□□□□ -1.01
NCL-203ENST00000417652 STYK1Q6J9G0 422 aa8.75□□□□□ -1.01
NCL-203ENST00000417652 CCDC191Q8NCU4 936 aa8.75□□□□□ -1.01
NCL-203ENST00000417652 DNAAF4Q8WXU2 420 aa8.75□□□□□ -1.01
NCL-203ENST00000417652 ISCA1Q9BUE6 129 aa8.75□□□□□ -1.01
NCL-203ENST00000417652 BCL2L13Q9BXK5 485 aa8.75□□□□□ -1.01
NCL-203ENST00000417652 PXDNLA1KZ92 1463 aa8.75□□□□□ -1.01
NCL-203ENST00000417652 RNF123Q5XPI4 1314 aa8.75□□□□□ -1.01
NCL-203ENST00000417652 IRS4O14654 1257 aaPredicted RBP8.74□□□□□ -1.01
NCL-203ENST00000417652 C21orf2O43822 256 aa8.74□□□□□ -1.01
NCL-203ENST00000417652 TRIM28Q13263 835 aaKnown RBP8.74□□□□□ -1.01
NCL-203ENST00000417652 DDX46Q7L014 1031 aaKnown RBP8.74□□□□□ -1.01
NCL-203ENST00000417652 ZBTB38Q8NAP3 1195 aaPredicted RBP8.74□□□□□ -1.01
NCL-203ENST00000417652 SSH1Q8WYL5 1049 aa8.74□□□□□ -1.01
NCL-203ENST00000417652 KIF13BQ9NQT8 1826 aa8.73□□□□□ -1.01
NCL-203ENST00000417652 F6X3S4 739 aa8.73□□□□□ -1.01
NCL-203ENST00000417652 ABCB7O75027 752 aa8.73□□□□□ -1.01
NCL-203ENST00000417652 CWF19L2Q2TBE0 894 aaKnown RBP8.73□□□□□ -1.01
NCL-203ENST00000417652 ALDH1L2Q3SY69 923 aa8.73□□□□□ -1.01
NCL-203ENST00000417652 SLC10A5Q5PT55 438 aa8.73□□□□□ -1.01
NCL-203ENST00000417652 SOGA3Q5TF21 947 aa8.73□□□□□ -1.01
NCL-203ENST00000417652 PRPF40BQ6NWY9 871 aaKnown RBP8.73□□□□□ -1.01
NCL-203ENST00000417652 TRMT2AQ8IZ69 625 aaKnown RBP8.73□□□□□ -1.01
NCL-203ENST00000417652 SYNE4Q8N205 404 aa8.73□□□□□ -1.01
NCL-203ENST00000417652 MRPL50Q8N5N7 158 aaKnown RBP8.73□□□□□ -1.01
NCL-203ENST00000417652 LINS1Q8NG48 757 aa8.73□□□□□ -1.01
NCL-203ENST00000417652 JARID2Q92833 1246 aaPredicted RBP8.73□□□□□ -1.01
NCL-203ENST00000417652 YTHDC1Q96MU7 727 aaKnown RBP8.73□□□□□ -1.01
NCL-203ENST00000417652 C9orf78Q9NZ63 289 aaPredicted RBP8.73□□□□□ -1.01
NCL-203ENST00000417652 ZBED9Q6R2W3 1325 aa8.73□□□□□ -1.01
NCL-203ENST00000417652 IBTKQ9P2D0 1353 aaPredicted RBP8.73□□□□□ -1.01
NCL-203ENST00000417652 NEURL1BA8MQ27 555 aa8.72□□□□□ -1.01
NCL-203ENST00000417652 IPO8O15397 1037 aaKnown RBP8.72□□□□□ -1.01
NCL-203ENST00000417652 PCCAP05165 728 aaPredicted RBP8.72□□□□□ -1.01
NCL-203ENST00000417652 FRAT1Q92837 279 aaPredicted RBP8.72□□□□□ -1.01
NCL-203ENST00000417652 SRCIN1Q9C0H9 1055 aa8.72□□□□□ -1.01
NCL-203ENST00000417652 PTPRCP08575 1304 aa8.72□□□□□ -1.01
NCL-203ENST00000417652 ADCY9O60503 1353 aa8.72□□□□□ -1.01
NCL-203ENST00000417652 ABCC12Q96J65 1359 aa8.72□□□□□ -1.01
NCL-203ENST00000417652 NRXN2Q9P2S2 1712 aa8.71□□□□□ -1.01
NCL-203ENST00000417652 KLRG2A4D1S0 409 aaPredicted RBP8.71□□□□□ -1.02
NCL-203ENST00000417652 PDE8AO60658 829 aa8.71□□□□□ -1.02
NCL-203ENST00000417652 IGKV5-2P06315 115 aa8.71□□□□□ -1.02
NCL-203ENST00000417652 GCKRQ14397 625 aa8.71□□□□□ -1.02
NCL-203ENST00000417652 UBE3BQ7Z3V4 1068 aa8.71□□□□□ -1.02
NCL-203ENST00000417652 CCDC85AQ96PX6 553 aaPredicted RBP8.71□□□□□ -1.02
NCL-203ENST00000417652 CRAMP1Q96RY5 1269 aa8.71□□□□□ -1.02
NCL-203ENST00000417652 NOB1Q9ULX3 412 aaKnown RBP8.71□□□□□ -1.02
NCL-203ENST00000417652 ANKRD36CQ5JPF3 1778 aa8.71□□□□□ -1.02
NCL-203ENST00000417652 ARFGEF2Q9Y6D5 1785 aa8.71□□□□□ -1.02
NCL-203ENST00000417652 CHD4Q14839 1912 aa8.7□□□□□ -1.02
NCL-203ENST00000417652 PPEF1O14829 653 aaPredicted RBP8.7□□□□□ -1.02
NCL-203ENST00000417652 BBOX1O75936 387 aa8.7□□□□□ -1.02
NCL-203ENST00000417652 HOXA10P31260 410 aaPredicted RBP8.7□□□□□ -1.02
NCL-203ENST00000417652 RARSP54136 660 aaKnown RBP8.7□□□□□ -1.02
NCL-203ENST00000417652 CRY2Q49AN0 593 aa8.7□□□□□ -1.02
NCL-203ENST00000417652 CCDC152Q4G0S7 254 aa8.7□□□□□ -1.02
NCL-203ENST00000417652 CCDC93Q567U6 631 aa8.7□□□□□ -1.02
NCL-203ENST00000417652 C3orf67Q6ZVT6 689 aa8.7□□□□□ -1.02
NCL-203ENST00000417652 RTKN2Q8IZC4 609 aa8.7□□□□□ -1.02
NCL-203ENST00000417652 API5Q9BZZ5 524 aaKnown RBP8.7□□□□□ -1.02
NCL-203ENST00000417652 RNF181Q9P0P0 153 aa8.7□□□□□ -1.02
NCL-203ENST00000417652 CHMP3Q9Y3E7 222 aa8.7□□□□□ -1.02
NCL-203ENST00000417652 ANKRD31Q8N7Z5 1873 aa8.7□□□□□ -1.02
NCL-203ENST00000417652 ALDH1L1O75891 902 aa8.69□□□□□ -1.02
NCL-203ENST00000417652 LMNB1P20700 586 aa8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms