RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 RIC3Q7Z5B4 369 aa17.36■□□□□ 0.37
HDAC9-208ENST00000417496 FERMT3Q86UX7 667 aa17.36■□□□□ 0.37
HDAC9-208ENST00000417496 TMEM87AQ8NBN3 555 aa17.36■□□□□ 0.37
HDAC9-208ENST00000417496 CHGBP05060 677 aa17.35■□□□□ 0.37
HDAC9-208ENST00000417496 UBE2HP62256 183 aa17.35■□□□□ 0.37
HDAC9-208ENST00000417496 ERC1Q8IUD2 1116 aa17.35■□□□□ 0.37
HDAC9-208ENST00000417496 CHMP3Q9Y3E7 222 aa17.35■□□□□ 0.37
HDAC9-208ENST00000417496 FER1L4A9Z1Z3 1794 aa17.35■□□□□ 0.37
HDAC9-208ENST00000417496 ZKSCAN1P17029 563 aaPredicted RBP17.35■□□□□ 0.37
HDAC9-208ENST00000417496 KDM3BQ7LBC6 1761 aa17.34■□□□□ 0.37
HDAC9-208ENST00000417496 HEG1Q9ULI3 1381 aa17.34■□□□□ 0.37
HDAC9-208ENST00000417496 PLCB2Q00722 1185 aa17.34■□□□□ 0.37
HDAC9-208ENST00000417496 DDX21Q9NR30 783 aaKnown RBP eCLIP17.34■□□□□ 0.37
HDAC9-208ENST00000417496 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP17.34■□□□□ 0.37
HDAC9-208ENST00000417496 RRP9O43818 475 aaKnown RBP17.34■□□□□ 0.37
HDAC9-208ENST00000417496 NFATC2IPQ8NCF5 419 aa17.34■□□□□ 0.37
HDAC9-208ENST00000417496 FSD1Q9BTV5 496 aa17.34■□□□□ 0.37
HDAC9-208ENST00000417496 ZNF589Q86UQ0 364 aaPredicted RBP17.33■□□□□ 0.36
HDAC9-208ENST00000417496 MAP4K1Q92918 833 aa17.33■□□□□ 0.36
HDAC9-208ENST00000417496 SLC27A2O14975 620 aa17.32■□□□□ 0.36
HDAC9-208ENST00000417496 ZNF790Q6PG37 636 aa17.32■□□□□ 0.36
HDAC9-208ENST00000417496 COPS6Q7L5N1 327 aa17.32■□□□□ 0.36
HDAC9-208ENST00000417496 XAGE3Q8WTP9 111 aa17.32■□□□□ 0.36
HDAC9-208ENST00000417496 USP54Q70EL1 1684 aa17.32■□□□□ 0.36
HDAC9-208ENST00000417496 ADCY5O95622 1261 aa17.31■□□□□ 0.36
HDAC9-208ENST00000417496 DDX58O95786 925 aaKnown RBP17.31■□□□□ 0.36
HDAC9-208ENST00000417496 STK3Q13188 491 aa17.31■□□□□ 0.36
HDAC9-208ENST00000417496 KCNB2Q92953 911 aa17.31■□□□□ 0.36
HDAC9-208ENST00000417496 MYD88Q99836 296 aa17.31■□□□□ 0.36
HDAC9-208ENST00000417496 TM6SF1Q9BZW5 370 aa17.31■□□□□ 0.36
HDAC9-208ENST00000417496 LARP1BQ659C4 914 aaKnown RBP17.31■□□□□ 0.36
HDAC9-208ENST00000417496 C17orf53Q8N3J3 647 aaPredicted RBP17.31■□□□□ 0.36
HDAC9-208ENST00000417496 TTC12Q9H892 705 aaPredicted RBP17.31■□□□□ 0.36
HDAC9-208ENST00000417496 CCDC9Q9Y3X0 531 aaKnown RBP17.31■□□□□ 0.36
HDAC9-208ENST00000417496 ATP6V1DQ9Y5K8 247 aa17.31■□□□□ 0.36
HDAC9-208ENST00000417496 CDC37L1Q7L3B6 337 aa17.3■□□□□ 0.36
HDAC9-208ENST00000417496 NLRP2Q9NX02 1062 aa17.3■□□□□ 0.36
HDAC9-208ENST00000417496 NEURL1BA8MQ27 555 aa17.3■□□□□ 0.36
HDAC9-208ENST00000417496 DDX17Q92841 729 aaKnown RBP17.3■□□□□ 0.36
HDAC9-208ENST00000417496 ZSCAN31Q96LW9 406 aaPredicted RBP17.3■□□□□ 0.36
HDAC9-208ENST00000417496 SH2B1Q9NRF2 756 aaPredicted RBP17.3■□□□□ 0.36
HDAC9-208ENST00000417496 USP16Q9Y5T5 823 aa17.3■□□□□ 0.36
HDAC9-208ENST00000417496 GCKRQ14397 625 aa17.29■□□□□ 0.36
HDAC9-208ENST00000417496 KRT28Q7Z3Y7 464 aa17.29■□□□□ 0.36
HDAC9-208ENST00000417496 ZNF496Q96IT1 587 aaPredicted RBP17.29■□□□□ 0.36
HDAC9-208ENST00000417496 UTYO14607 1347 aa17.29■□□□□ 0.36
HDAC9-208ENST00000417496 ADGRL3Q9HAR2 1447 aa17.29■□□□□ 0.36
HDAC9-208ENST00000417496 MCM5P33992 734 aa17.29■□□□□ 0.36
HDAC9-208ENST00000417496 LMO7Q8WWI1 1683 aa17.28■□□□□ 0.36
HDAC9-208ENST00000417496 FAM13BQ9NYF5 915 aa17.28■□□□□ 0.36
HDAC9-208ENST00000417496 HDAC5Q9UQL6 1122 aa17.28■□□□□ 0.36
HDAC9-208ENST00000417496 UQCRHLA0A096LP55 91 aa17.28■□□□□ 0.36
HDAC9-208ENST00000417496 ATP5J2-PTCD1G3V325 749 aa17.28■□□□□ 0.36
HDAC9-208ENST00000417496 AP5Z1O43299 807 aa17.28■□□□□ 0.36
HDAC9-208ENST00000417496 PTCD1O75127 700 aaKnown RBP17.28■□□□□ 0.36
HDAC9-208ENST00000417496 UQCRHP07919 91 aa17.28■□□□□ 0.36
HDAC9-208ENST00000417496 TRHP20396 242 aaPredicted RBP17.28■□□□□ 0.36
HDAC9-208ENST00000417496 NEXNQ0ZGT2 675 aa17.28■□□□□ 0.36
HDAC9-208ENST00000417496 CAMK4Q16566 473 aa17.28■□□□□ 0.36
HDAC9-208ENST00000417496 LARP1Q6PKG0 1096 aaKnown RBP17.28■□□□□ 0.36
HDAC9-208ENST00000417496 FAM184AQ8NB25 1140 aa17.28■□□□□ 0.36
HDAC9-208ENST00000417496 CRYBG1Q9Y4K1 1723 aa17.28■□□□□ 0.36
HDAC9-208ENST00000417496 BLOC1S2Q6QNY1 142 aa17.27■□□□□ 0.36
HDAC9-208ENST00000417496 TTC6Q86TZ1 520 aa17.27■□□□□ 0.36
HDAC9-208ENST00000417496 TFIP11Q9UBB9 837 aaKnown RBP17.27■□□□□ 0.36
HDAC9-208ENST00000417496 ERBB3P21860 1342 aa17.27■□□□□ 0.36
HDAC9-208ENST00000417496 CCDC129Q6ZRS4 1044 aa17.27■□□□□ 0.36
HDAC9-208ENST00000417496 RAPGEF4Q8WZA2 1011 aa17.27■□□□□ 0.36
HDAC9-208ENST00000417496 SEC62Q99442 399 aaKnown RBP17.27■□□□□ 0.36
HDAC9-208ENST00000417496 FUCA2Q9BTY2 467 aa17.27■□□□□ 0.36
HDAC9-208ENST00000417496 SLC52A2Q9HAB3 445 aa17.27■□□□□ 0.36
HDAC9-208ENST00000417496 TFCP2Q12800 502 aa17.26■□□□□ 0.35
HDAC9-208ENST00000417496 TOB2Q14106 344 aaPredicted RBP17.26■□□□□ 0.35
HDAC9-208ENST00000417496 UBE3BQ7Z3V4 1068 aa17.26■□□□□ 0.35
HDAC9-208ENST00000417496 DBNLQ9UJU6 430 aaKnown RBP17.26■□□□□ 0.35
HDAC9-208ENST00000417496 PSMA5P28066 241 aa17.26■□□□□ 0.35
HDAC9-208ENST00000417496 NCAPD2Q15021 1401 aa17.26■□□□□ 0.35
HDAC9-208ENST00000417496 CHD2O14647 1828 aaKnown RBP17.25■□□□□ 0.35
HDAC9-208ENST00000417496 NPHP4O75161 1426 aaPredicted RBP17.25■□□□□ 0.35
HDAC9-208ENST00000417496 KDM4AO75164 1064 aa17.25■□□□□ 0.35
HDAC9-208ENST00000417496 KIAA2012Q0VF49 1180 aa17.25■□□□□ 0.35
HDAC9-208ENST00000417496 UVSSAQ2YD98 709 aa17.25■□□□□ 0.35
HDAC9-208ENST00000417496 ANKRD13DQ6ZTN6 518 aa17.25■□□□□ 0.35
HDAC9-208ENST00000417496 CABLES1Q8TDN4 633 aa17.25■□□□□ 0.35
HDAC9-208ENST00000417496 DNAJC2Q99543 621 aaKnown RBP17.25■□□□□ 0.35
HDAC9-208ENST00000417496 COL15A1P39059 1388 aa17.25■□□□□ 0.35
HDAC9-208ENST00000417496 NPHP3Q7Z494 1330 aa17.25■□□□□ 0.35
HDAC9-208ENST00000417496 HIP1O00291 1037 aa17.25■□□□□ 0.35
HDAC9-208ENST00000417496 TAF5LO75529 589 aa17.25■□□□□ 0.35
HDAC9-208ENST00000417496 LETM1O95202 739 aaPredicted RBP17.25■□□□□ 0.35
HDAC9-208ENST00000417496 LIG1P18858 919 aa17.25■□□□□ 0.35
HDAC9-208ENST00000417496 RPS6KB1P23443 525 aa17.25■□□□□ 0.35
HDAC9-208ENST00000417496 CSPP1Q1MSJ5 1256 aa17.25■□□□□ 0.35
HDAC9-208ENST00000417496 SLFNL1Q499Z3 407 aa17.25■□□□□ 0.35
HDAC9-208ENST00000417496 METTL22Q9BUU2 404 aaPredicted RBP17.25■□□□□ 0.35
HDAC9-208ENST00000417496 DNTTIP2Q5QJE6 756 aaKnown RBP17.24■□□□□ 0.35
HDAC9-208ENST00000417496 PTPN12Q05209 780 aaKnown RBP17.24■□□□□ 0.35
HDAC9-208ENST00000417496 RNF20Q5VTR2 975 aa17.24■□□□□ 0.35
HDAC9-208ENST00000417496 JAK2O60674 1132 aa17.23■□□□□ 0.35
HDAC9-208ENST00000417496 PHKG2P15735 406 aa17.23■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms