RNA–Protein interactions for RNA: ENST00000417344.2

CCNT1-202, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 2,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-202ENST00000417344 UBXN6Q9BZV1 441 aa7.55□□□□□ -1.2
CCNT1-202ENST00000417344 SRCIN1Q9C0H9 1055 aa7.55□□□□□ -1.2
CCNT1-202ENST00000417344 CXorf56Q9H5V9 222 aa7.55□□□□□ -1.2
CCNT1-202ENST00000417344 ARGLU1Q9NWB6 273 aaPredicted RBP7.55□□□□□ -1.2
CCNT1-202ENST00000417344 PLA2R1Q13018 1463 aa7.55□□□□□ -1.2
CCNT1-202ENST00000417344 DNMBPQ6XZF7 1577 aa7.55□□□□□ -1.2
CCNT1-202ENST00000417344 POTEB3A0JP26 581 aa7.54□□□□□ -1.2
CCNT1-202ENST00000417344 USP27XA6NNY8 438 aa7.54□□□□□ -1.2
CCNT1-202ENST00000417344 GSCP56915 257 aaPredicted RBP7.54□□□□□ -1.2
CCNT1-202ENST00000417344 TTLL12Q14166 644 aaPredicted RBP7.54□□□□□ -1.2
CCNT1-202ENST00000417344 PROX2Q3B8N5 592 aa7.54□□□□□ -1.2
CCNT1-202ENST00000417344 POTEBQ6S5H4 581 aa7.54□□□□□ -1.2
CCNT1-202ENST00000417344 SIRT2Q8IXJ6 389 aa7.54□□□□□ -1.2
CCNT1-202ENST00000417344 TRIM5Q9C035 493 aa7.54□□□□□ -1.2
CCNT1-202ENST00000417344 GPCPD1Q9NPB8 672 aa7.54□□□□□ -1.2
CCNT1-202ENST00000417344 ELP1O95163 1332 aa7.54□□□□□ -1.2
CCNT1-202ENST00000417344 KIF2AO00139 706 aaPredicted RBP7.54□□□□□ -1.2
CCNT1-202ENST00000417344 ERC2O15083 957 aa7.54□□□□□ -1.2
CCNT1-202ENST00000417344 ATP8B1O43520 1251 aa7.54□□□□□ -1.2
CCNT1-202ENST00000417344 SDSP20132 328 aa7.54□□□□□ -1.2
CCNT1-202ENST00000417344 ALDH1L2Q3SY69 923 aa7.54□□□□□ -1.2
CCNT1-202ENST00000417344 GRIPAP1Q4V328 841 aa7.54□□□□□ -1.2
CCNT1-202ENST00000417344 SWT1Q5T5J6 900 aaKnown RBP7.54□□□□□ -1.2
CCNT1-202ENST00000417344 DMRTA1Q5VZB9 504 aa7.54□□□□□ -1.2
CCNT1-202ENST00000417344 LUZP1Q86V48 1076 aa7.54□□□□□ -1.2
CCNT1-202ENST00000417344 SUGP1Q8IWZ8 645 aaKnown RBP7.54□□□□□ -1.2
CCNT1-202ENST00000417344 PARP9Q8IXQ6 854 aa7.54□□□□□ -1.2
CCNT1-202ENST00000417344 MNS1Q8NEH6 495 aa7.54□□□□□ -1.2
CCNT1-202ENST00000417344 NBPF3Q9H094 633 aa7.54□□□□□ -1.2
CCNT1-202ENST00000417344 PSD3Q9NYI0 1048 aa7.54□□□□□ -1.2
CCNT1-202ENST00000417344 CLIP2Q9UDT6 1046 aa7.54□□□□□ -1.2
CCNT1-202ENST00000417344 PNMA3Q9UL41 463 aa7.54□□□□□ -1.2
CCNT1-202ENST00000417344 VPS9D1Q9Y2B5 631 aa7.54□□□□□ -1.2
CCNT1-202ENST00000417344 AXIN2Q9Y2T1 843 aa7.54□□□□□ -1.2
CCNT1-202ENST00000417344 RTL1A6NKG5 1358 aa7.53□□□□□ -1.2
CCNT1-202ENST00000417344 NEMFO60524 1076 aa7.53□□□□□ -1.2
CCNT1-202ENST00000417344 IVLP07476 585 aa7.53□□□□□ -1.2
CCNT1-202ENST00000417344 DNAJB2P25686 324 aa7.53□□□□□ -1.2
CCNT1-202ENST00000417344 OAS2P29728 719 aaKnown RBP7.53□□□□□ -1.2
CCNT1-202ENST00000417344 LSM11P83369 360 aaKnown RBP eCLIP7.53□□□□□ -1.2
CCNT1-202ENST00000417344 ARHGAP29Q52LW3 1261 aa7.53□□□□□ -1.2
CCNT1-202ENST00000417344 NUDT18Q6ZVK8 323 aa7.53□□□□□ -1.2
CCNT1-202ENST00000417344 FILIP1Q7Z7B0 1213 aa7.53□□□□□ -1.2
CCNT1-202ENST00000417344 LAPTM4BQ86VI4 370 aa7.53□□□□□ -1.2
CCNT1-202ENST00000417344 LRRC8AQ8IWT6 810 aa7.53□□□□□ -1.2
CCNT1-202ENST00000417344 EXOC4Q96A65 974 aa7.53□□□□□ -1.2
CCNT1-202ENST00000417344 TMUB1Q9BVT8 246 aa7.53□□□□□ -1.2
CCNT1-202ENST00000417344 KDM4CQ9H3R0 1056 aa7.53□□□□□ -1.2
CCNT1-202ENST00000417344 L2HGDHQ9H9P8 463 aa7.53□□□□□ -1.2
CCNT1-202ENST00000417344 MED4Q9NPJ6 270 aa7.53□□□□□ -1.2
CCNT1-202ENST00000417344 KIAA1468Q9P260 1216 aa7.53□□□□□ -1.2
CCNT1-202ENST00000417344 SUFUQ9UMX1 484 aa7.53□□□□□ -1.2
CCNT1-202ENST00000417344 ADGRL1O94910 1474 aa7.53□□□□□ -1.2
CCNT1-202ENST00000417344 TROQ12816 1431 aaPredicted RBP7.53□□□□□ -1.2
CCNT1-202ENST00000417344 AATKQ6ZMQ8 1374 aa7.53□□□□□ -1.2
CCNT1-202ENST00000417344 IQGAP1P46940 1657 aa7.52□□□□□ -1.2
CCNT1-202ENST00000417344 FIBPO43427 364 aa7.52□□□□□ -1.2
CCNT1-202ENST00000417344 TSPY4P0CV99 314 aa7.52□□□□□ -1.2
CCNT1-202ENST00000417344 TSPY10P0CW01 314 aa7.52□□□□□ -1.2
CCNT1-202ENST00000417344 HSP90B1P14625 803 aaKnown RBP7.52□□□□□ -1.2
CCNT1-202ENST00000417344 ACTN2P35609 894 aa7.52□□□□□ -1.2
CCNT1-202ENST00000417344 CCDC144BQ3MJ40 725 aa7.52□□□□□ -1.2
CCNT1-202ENST00000417344 MCTP2Q6DN12 878 aa7.52□□□□□ -1.2
CCNT1-202ENST00000417344 NOL8Q76FK4 1167 aaKnown RBP7.52□□□□□ -1.2
CCNT1-202ENST00000417344 MORC1Q86VD1 984 aa7.52□□□□□ -1.2
CCNT1-202ENST00000417344 REXO1L1PQ8IX06 675 aa7.52□□□□□ -1.2
CCNT1-202ENST00000417344 CCDC144CPQ8IYA2 1237 aa7.52□□□□□ -1.2
CCNT1-202ENST00000417344 PPM1EQ8WY54 764 aa7.52□□□□□ -1.2
CCNT1-202ENST00000417344 MRVI1Q9Y6F6 885 aa7.52□□□□□ -1.2
CCNT1-202ENST00000417344 NUP153P49790 1475 aaKnown RBP7.52□□□□□ -1.21
CCNT1-202ENST00000417344 ZNF518AQ6AHZ1 1483 aa7.52□□□□□ -1.21
CCNT1-202ENST00000417344 PRG4Q92954 1404 aaPredicted RBP7.52□□□□□ -1.21
CCNT1-202ENST00000417344 ZSCAN22P10073 491 aaPredicted RBP7.52□□□□□ -1.21
CCNT1-202ENST00000417344 CDC25BP30305 580 aa7.52□□□□□ -1.21
CCNT1-202ENST00000417344 LMAN1P49257 510 aa7.52□□□□□ -1.21
CCNT1-202ENST00000417344 TYRO3Q06418 890 aa7.52□□□□□ -1.21
CCNT1-202ENST00000417344 SMC1AQ14683 1233 aaKnown RBP7.52□□□□□ -1.21
CCNT1-202ENST00000417344 TMEM132AQ24JP5 1023 aa7.52□□□□□ -1.21
CCNT1-202ENST00000417344 HSP90AB3PQ58FF7 597 aa7.52□□□□□ -1.21
CCNT1-202ENST00000417344 CFAP53Q96M91 514 aa7.52□□□□□ -1.21
CCNT1-202ENST00000417344 PHOX2BQ99453 314 aa7.52□□□□□ -1.21
CCNT1-202ENST00000417344 CBX8Q9HC52 389 aa7.52□□□□□ -1.21
CCNT1-202ENST00000417344 ZCCHC17Q9NP64 241 aaKnown RBP7.52□□□□□ -1.21
CCNT1-202ENST00000417344 ATP6V1DQ9Y5K8 247 aa7.52□□□□□ -1.21
CCNT1-202ENST00000417344 TOPBP1Q92547 1522 aa7.52□□□□□ -1.21
CCNT1-202ENST00000417344 MYO5CQ9NQX4 1742 aa7.52□□□□□ -1.21
CCNT1-202ENST00000417344 RGS12O14924 1447 aa7.52□□□□□ -1.21
CCNT1-202ENST00000417344 ADGRB2O60241 1585 aa7.51□□□□□ -1.21
CCNT1-202ENST00000417344 SKILP12757 684 aa7.51□□□□□ -1.21
CCNT1-202ENST00000417344 CASTP20810 708 aaKnown RBP7.51□□□□□ -1.21
CCNT1-202ENST00000417344 TDO2P48775 406 aa7.51□□□□□ -1.21
CCNT1-202ENST00000417344 MAP3K11Q16584 847 aa7.51□□□□□ -1.21
CCNT1-202ENST00000417344 LEKR1Q6ZMV7 388 aa7.51□□□□□ -1.21
CCNT1-202ENST00000417344 C16orf71Q8IYS4 520 aaPredicted RBP7.51□□□□□ -1.21
CCNT1-202ENST00000417344 CCAR2Q8N163 923 aaKnown RBP7.51□□□□□ -1.21
CCNT1-202ENST00000417344 KCND1Q9NSA2 647 aa7.51□□□□□ -1.21
CCNT1-202ENST00000417344 MYOM2P54296 1465 aa7.51□□□□□ -1.21
CCNT1-202ENST00000417344 FANCD2Q9BXW9 1451 aa7.51□□□□□ -1.21
CCNT1-202ENST00000417344 KDM5AP29375 1690 aaKnown RBP7.51□□□□□ -1.21
CCNT1-202ENST00000417344 PIK3R4Q99570 1358 aa7.51□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms