RNA–Protein interactions for RNA: ENST00000417107.5

HDAC7-204, Transcript of histone deacetylase 7, humanhuman

TSL 4

Gene HDAC7, Length 569 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-204ENST00000417107 CHMP4AQ9BY43 222 aa23.35■■□□□ 1.33
HDAC7-204ENST00000417107 NYXQ9GZU5 481 aa23.35■■□□□ 1.33
HDAC7-204ENST00000417107 DDX21Q9NR30 783 aaKnown RBP eCLIP23.35■■□□□ 1.33
HDAC7-204ENST00000417107 VEGFAP15692 232 aaPredicted RBP23.34■■□□□ 1.33
HDAC7-204ENST00000417107 SUSD4Q5VX71 490 aa23.34■■□□□ 1.33
HDAC7-204ENST00000417107 C8orf58Q8NAV2 365 aa23.34■■□□□ 1.33
HDAC7-204ENST00000417107 ARFGEF2Q9Y6D5 1785 aa23.34■■□□□ 1.33
HDAC7-204ENST00000417107 FSTL1Q12841 308 aa23.33■■□□□ 1.33
HDAC7-204ENST00000417107 CCDC93Q567U6 631 aa23.33■■□□□ 1.33
HDAC7-204ENST00000417107 GIGYF2Q6Y7W6 1299 aaKnown RBP23.33■■□□□ 1.33
HDAC7-204ENST00000417107 ZNF34Q8IZ26 560 aa23.33■■□□□ 1.33
HDAC7-204ENST00000417107 NUP98P52948 1817 aa23.33■■□□□ 1.32
HDAC7-204ENST00000417107 DPY19L2Q6NUT2 758 aa23.32■■□□□ 1.32
HDAC7-204ENST00000417107 DBF4Q9UBU7 674 aaPredicted RBP23.32■■□□□ 1.32
HDAC7-204ENST00000417107 HTRA3P83110 453 aa23.31■■□□□ 1.32
HDAC7-204ENST00000417107 CHPF2Q9P2E5 772 aa23.31■■□□□ 1.32
HDAC7-204ENST00000417107 POTECB2RU33 542 aa23.3■■□□□ 1.32
HDAC7-204ENST00000417107 ALDH1B1P30837 517 aa23.3■■□□□ 1.32
HDAC7-204ENST00000417107 GOLGA2Q08379 1002 aa23.3■■□□□ 1.32
HDAC7-204ENST00000417107 AIMP1Q12904 312 aaKnown RBP23.3■■□□□ 1.32
HDAC7-204ENST00000417107 CRY2Q49AN0 593 aa23.3■■□□□ 1.32
HDAC7-204ENST00000417107 COPS6Q7L5N1 327 aa23.3■■□□□ 1.32
HDAC7-204ENST00000417107 ZNF277Q9NRM2 450 aaPredicted RBP23.3■■□□□ 1.32
HDAC7-204ENST00000417107 NTSR2O95665 410 aa23.29■■□□□ 1.32
HDAC7-204ENST00000417107 FKBP4Q02790 459 aaKnown RBP eCLIP23.29■■□□□ 1.32
HDAC7-204ENST00000417107 TSPYL6Q8N831 410 aa23.29■■□□□ 1.32
HDAC7-204ENST00000417107 SMC1BQ8NDV3 1235 aa23.29■■□□□ 1.32
HDAC7-204ENST00000417107 XAGE3Q8WTP9 111 aa23.29■■□□□ 1.32
HDAC7-204ENST00000417107 MYH16Q9H6N6 1097 aa23.29■■□□□ 1.32
HDAC7-204ENST00000417107 HYPKQ9NX55 129 aa23.29■■□□□ 1.32
HDAC7-204ENST00000417107 IBTKQ9P2D0 1353 aaPredicted RBP23.28■■□□□ 1.32
HDAC7-204ENST00000417107 DDNO94850 711 aaPredicted RBP23.28■■□□□ 1.32
HDAC7-204ENST00000417107 DNAJC5GQ8N7S2 189 aa23.28■■□□□ 1.32
HDAC7-204ENST00000417107 SPINK5Q9NQ38 1064 aaPredicted RBP23.28■■□□□ 1.32
HDAC7-204ENST00000417107 ZNF521Q96K83 1311 aa23.28■■□□□ 1.32
HDAC7-204ENST00000417107 FANCIQ9NVI1 1328 aa23.28■■□□□ 1.32
HDAC7-204ENST00000417107 CCDC30Q5VVM6 783 aa23.27■■□□□ 1.32
HDAC7-204ENST00000417107 C3orf67Q6ZVT6 689 aa23.27■■□□□ 1.32
HDAC7-204ENST00000417107 RPGRQ92834 1020 aaKnown RBP23.27■■□□□ 1.32
HDAC7-204ENST00000417107 DICER1Q9UPY3 1922 aaKnown RBP23.27■■□□□ 1.32
HDAC7-204ENST00000417107 TWISTNBQ3B726 338 aaPredicted RBP23.26■■□□□ 1.31
HDAC7-204ENST00000417107 PARP10Q53GL7 1025 aa23.26■■□□□ 1.31
HDAC7-204ENST00000417107 PPP1R42Q7Z4L9 355 aa23.26■■□□□ 1.31
HDAC7-204ENST00000417107 SLC51AQ86UW1 340 aa23.26■■□□□ 1.31
HDAC7-204ENST00000417107 RTKN2Q8IZC4 609 aa23.26■■□□□ 1.31
HDAC7-204ENST00000417107 WDR90Q96KV7 1748 aa23.25■■□□□ 1.31
HDAC7-204ENST00000417107 RIC1Q4ADV7 1423 aa23.25■■□□□ 1.31
HDAC7-204ENST00000417107 HOXA10P31260 410 aaPredicted RBP23.24■■□□□ 1.31
HDAC7-204ENST00000417107 SYNE4Q8N205 404 aa23.24■■□□□ 1.31
HDAC7-204ENST00000417107 UTP14AQ9BVJ6 771 aaKnown RBP23.24■■□□□ 1.31
HDAC7-204ENST00000417107 TCERG1O14776 1098 aaKnown RBP23.23■■□□□ 1.31
HDAC7-204ENST00000417107 EXOSC9Q06265 439 aaKnown RBP23.23■■□□□ 1.31
HDAC7-204ENST00000417107 ZNF428Q96B54 188 aa23.23■■□□□ 1.31
HDAC7-204ENST00000417107 ANKRD13DQ6ZTN6 518 aa23.22■■□□□ 1.31
HDAC7-204ENST00000417107 RBM17Q96I25 401 aaKnown RBP23.22■■□□□ 1.31
HDAC7-204ENST00000417107 VAMP4O75379 141 aa23.21■■□□□ 1.31
HDAC7-204ENST00000417107 IARSP41252 1262 aaKnown RBP23.21■■□□□ 1.31
HDAC7-204ENST00000417107 HSP90AB3PQ58FF7 597 aa23.21■■□□□ 1.31
HDAC7-204ENST00000417107 NLRP10Q86W26 655 aa23.21■■□□□ 1.31
HDAC7-204ENST00000417107 PLBD2Q8NHP8 589 aa23.21■■□□□ 1.31
HDAC7-204ENST00000417107 CRAMP1Q96RY5 1269 aa23.21■■□□□ 1.31
HDAC7-204ENST00000417107 STK31Q9BXU1 1019 aa23.21■■□□□ 1.31
HDAC7-204ENST00000417107 ZNF541Q9H0D2 1346 aa23.21■■□□□ 1.31
HDAC7-204ENST00000417107 SNED1Q8TER0 1413 aa23.21■■□□□ 1.31
HDAC7-204ENST00000417107 E9PSI1 815 aa23.2■■□□□ 1.3
HDAC7-204ENST00000417107 POTEIP0CG38 1075 aa23.2■■□□□ 1.3
HDAC7-204ENST00000417107 POTEJP0CG39 1038 aa23.2■■□□□ 1.3
HDAC7-204ENST00000417107 SLC10A5Q5PT55 438 aa23.2■■□□□ 1.3
HDAC7-204ENST00000417107 NLRP3Q96P20 1036 aa23.2■■□□□ 1.3
HDAC7-204ENST00000417107 PPEF1O14829 653 aaPredicted RBP23.19■■□□□ 1.3
HDAC7-204ENST00000417107 HCLS1P14317 486 aaPredicted RBP23.19■■□□□ 1.3
HDAC7-204ENST00000417107 TCIRG1Q13488 830 aa23.19■■□□□ 1.3
HDAC7-204ENST00000417107 PHAXQ9H814 394 aaKnown RBP23.19■■□□□ 1.3
HDAC7-204ENST00000417107 PSMD1Q99460 953 aa23.18■■□□□ 1.3
HDAC7-204ENST00000417107 SLFN5Q08AF3 891 aa23.17■■□□□ 1.3
HDAC7-204ENST00000417107 CC2D2BQ6DHV5 1058 aa23.17■■□□□ 1.3
HDAC7-204ENST00000417107 KLRG1Q96E93 195 aa23.17■■□□□ 1.3
HDAC7-204ENST00000417107 TRMT112Q9UI30 125 aaKnown RBP23.17■■□□□ 1.3
HDAC7-204ENST00000417107 DDX58O95786 925 aaKnown RBP23.16■■□□□ 1.3
HDAC7-204ENST00000417107 SLC4A2P04920 1241 aa23.16■■□□□ 1.3
HDAC7-204ENST00000417107 RIC3Q7Z5B4 369 aa23.16■■□□□ 1.3
HDAC7-204ENST00000417107 L3MBTL3Q96JM7 780 aaPredicted RBP23.16■■□□□ 1.3
HDAC7-204ENST00000417107 RNF123Q5XPI4 1314 aa23.15■■□□□ 1.3
HDAC7-204ENST00000417107 ANKRD36CQ5JPF3 1778 aa23.15■■□□□ 1.3
HDAC7-204ENST00000417107 CHADLQ6NUI6 762 aa23.15■■□□□ 1.3
HDAC7-204ENST00000417107 TAF1DQ9H5J8 278 aaPredicted RBP23.15■■□□□ 1.3
HDAC7-204ENST00000417107 ABCC4O15439 1325 aa23.14■■□□□ 1.3
HDAC7-204ENST00000417107 COL4A5P29400 1685 aa23.14■■□□□ 1.29
HDAC7-204ENST00000417107 IQCA1LA6NCM1 817 aa23.14■■□□□ 1.29
HDAC7-204ENST00000417107 FZD9O00144 591 aa23.14■■□□□ 1.29
HDAC7-204ENST00000417107 CDCA7LQ96GN5 454 aa23.14■■□□□ 1.29
HDAC7-204ENST00000417107 SH3TC1Q8TE82 1336 aa23.13■■□□□ 1.29
HDAC7-204ENST00000417107 ATP5J2-PTCD1G3V325 749 aa23.13■■□□□ 1.29
HDAC7-204ENST00000417107 JDP2Q8WYK2 163 aa23.13■■□□□ 1.29
HDAC7-204ENST00000417107 LARGE2Q8N3Y3 721 aa23.12■■□□□ 1.29
HDAC7-204ENST00000417107 ATP6V0A2Q9Y487 856 aa23.12■■□□□ 1.29
HDAC7-204ENST00000417107 GRIPAP1Q4V328 841 aa23.11■■□□□ 1.29
HDAC7-204ENST00000417107 TRMT2AQ8IZ69 625 aaKnown RBP23.11■■□□□ 1.29
HDAC7-204ENST00000417107 ISCA1Q9BUE6 129 aa23.11■■□□□ 1.29
HDAC7-204ENST00000417107 TRIM28Q13263 835 aaKnown RBP23.1■■□□□ 1.29
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms