RNA–Protein interactions for RNA: ENST00000417012.5

LRRTM1-205, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

TSL 1 (best)

Gene LRRTM1, Length 3,021 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-205ENST00000417012 MAP3K2Q9Y2U5 619 aa15.29■□□□□ 0.04
LRRTM1-205ENST00000417012 LARGE1O95461 756 aa15.29■□□□□ 0.04
LRRTM1-205ENST00000417012 FGD1P98174 961 aa15.29■□□□□ 0.04
LRRTM1-205ENST00000417012 DNM1Q05193 864 aaKnown RBP15.29■□□□□ 0.04
LRRTM1-205ENST00000417012 CHRNA2Q15822 529 aa15.29■□□□□ 0.04
LRRTM1-205ENST00000417012 VPS53Q5VIR6 699 aa15.29■□□□□ 0.04
LRRTM1-205ENST00000417012 C17orf53Q8N3J3 647 aaPredicted RBP15.29■□□□□ 0.04
LRRTM1-205ENST00000417012 TMEM94Q12767 1356 aa15.29■□□□□ 0.04
LRRTM1-205ENST00000417012 AIMP1Q12904 312 aaKnown RBP15.28■□□□□ 0.04
LRRTM1-205ENST00000417012 CWF19L2Q2TBE0 894 aaKnown RBP15.28■□□□□ 0.04
LRRTM1-205ENST00000417012 CCDC94Q9BW85 323 aaPredicted RBP15.28■□□□□ 0.04
LRRTM1-205ENST00000417012 MTMR6Q9Y217 621 aa15.28■□□□□ 0.04
LRRTM1-205ENST00000417012 USP42Q9H9J4 1324 aaKnown RBP15.28■□□□□ 0.04
LRRTM1-205ENST00000417012 VPS37CA5D8V6 355 aaPredicted RBP15.28■□□□□ 0.04
LRRTM1-205ENST00000417012 TPM3P06753 285 aa15.28■□□□□ 0.04
LRRTM1-205ENST00000417012 GTF2F1P35269 517 aaKnown RBP eCLIP15.28■□□□□ 0.04
LRRTM1-205ENST00000417012 CYP46A1Q9Y6A2 500 aa15.28■□□□□ 0.04
LRRTM1-205ENST00000417012 CRYBG1Q9Y4K1 1723 aa15.28■□□□□ 0.04
LRRTM1-205ENST00000417012 SMAP1Q8IYB5 467 aaPredicted RBP15.27■□□□□ 0.04
LRRTM1-205ENST00000417012 NCAPD2Q15021 1401 aa15.27■□□□□ 0.04
LRRTM1-205ENST00000417012 CCDC192P0DO97 292 aa15.27■□□□□ 0.04
LRRTM1-205ENST00000417012 AEBP2Q6ZN18 517 aaPredicted RBP15.27■□□□□ 0.04
LRRTM1-205ENST00000417012 CLASRPQ8N2M8 674 aaKnown RBP15.27■□□□□ 0.04
LRRTM1-205ENST00000417012 GPATCH3Q96I76 525 aa15.27■□□□□ 0.04
LRRTM1-205ENST00000417012 GOLGA6L6A8MZA4 724 aa15.27■□□□□ 0.03
LRRTM1-205ENST00000417012 PRPF40BQ6NWY9 871 aaKnown RBP15.27■□□□□ 0.03
LRRTM1-205ENST00000417012 CHMP4AQ9BY43 222 aa15.27■□□□□ 0.03
LRRTM1-205ENST00000417012 TM6SF1Q9BZW5 370 aa15.27■□□□□ 0.03
LRRTM1-205ENST00000417012 KIF3AQ9Y496 699 aa15.27■□□□□ 0.03
LRRTM1-205ENST00000417012 RAPGEF4Q8WZA2 1011 aa15.26■□□□□ 0.03
LRRTM1-205ENST00000417012 STRCP1A6NGW2 1772 aa15.26■□□□□ 0.03
LRRTM1-205ENST00000417012 CSB-PGBD3P0DP91 1061 aa15.26■□□□□ 0.03
LRRTM1-205ENST00000417012 ZKSCAN1P17029 563 aaPredicted RBP15.25■□□□□ 0.03
LRRTM1-205ENST00000417012 HSPA2P54652 639 aa15.25■□□□□ 0.03
LRRTM1-205ENST00000417012 PTH1RQ03431 593 aa15.25■□□□□ 0.03
LRRTM1-205ENST00000417012 CHAF1AQ13111 956 aaPredicted RBP15.25■□□□□ 0.03
LRRTM1-205ENST00000417012 NFATC2IPQ8NCF5 419 aa15.25■□□□□ 0.03
LRRTM1-205ENST00000417012 ZSWIM6Q9HCJ5 1215 aa15.25■□□□□ 0.03
LRRTM1-205ENST00000417012 C9orf78Q9NZ63 289 aaPredicted RBP15.25■□□□□ 0.03
LRRTM1-205ENST00000417012 ADCK5Q3MIX3 580 aa15.25■□□□□ 0.03
LRRTM1-205ENST00000417012 BCL11BQ9C0K0 894 aaPredicted RBP15.25■□□□□ 0.03
LRRTM1-205ENST00000417012 ECHDC1Q9NTX5 307 aa15.25■□□□□ 0.03
LRRTM1-205ENST00000417012 ALS2Q96Q42 1657 aa15.25■□□□□ 0.03
LRRTM1-205ENST00000417012 MST1RQ04912 1400 aa15.25■□□□□ 0.03
LRRTM1-205ENST00000417012 KIF1AQ12756 1690 aa15.25■□□□□ 0.03
LRRTM1-205ENST00000417012 MYL6BP14649 208 aa15.24■□□□□ 0.03
LRRTM1-205ENST00000417012 PIP4K2AP48426 406 aaPredicted RBP15.24■□□□□ 0.03
LRRTM1-205ENST00000417012 KRT85P78386 507 aa15.24■□□□□ 0.03
LRRTM1-205ENST00000417012 TSC1Q92574 1164 aa15.24■□□□□ 0.03
LRRTM1-205ENST00000417012 PDIA4P13667 645 aaKnown RBP15.24■□□□□ 0.03
LRRTM1-205ENST00000417012 KCNJ4P48050 445 aa15.24■□□□□ 0.03
LRRTM1-205ENST00000417012 KSR2Q6VAB6 950 aa15.24■□□□□ 0.03
LRRTM1-205ENST00000417012 KIAA1524Q8TCG1 905 aa15.24■□□□□ 0.03
LRRTM1-205ENST00000417012 JARID2Q92833 1246 aaPredicted RBP15.24■□□□□ 0.03
LRRTM1-205ENST00000417012 PA2G4Q9UQ80 394 aaKnown RBP15.24■□□□□ 0.03
LRRTM1-205ENST00000417012 HEG1Q9ULI3 1381 aa15.23■□□□□ 0.03
LRRTM1-205ENST00000417012 CAMTA1Q9Y6Y1 1673 aa15.23■□□□□ 0.03
LRRTM1-205ENST00000417012 IFIT2P09913 472 aaKnown RBP15.23■□□□□ 0.03
LRRTM1-205ENST00000417012 ZNF710Q8N1W2 664 aa15.23■□□□□ 0.03
LRRTM1-205ENST00000417012 SPC24Q8NBT2 197 aa15.23■□□□□ 0.03
LRRTM1-205ENST00000417012 CCDC171Q6TFL3 1326 aa15.23■□□□□ 0.03
LRRTM1-205ENST00000417012 SIPA1L3O60292 1781 aaPredicted RBP15.23■□□□□ 0.03
LRRTM1-205ENST00000417012 ME3Q16798 604 aa15.23■□□□□ 0.03
LRRTM1-205ENST00000417012 ZNF790Q6PG37 636 aa15.23■□□□□ 0.03
LRRTM1-205ENST00000417012 KCNB2Q92953 911 aa15.23■□□□□ 0.03
LRRTM1-205ENST00000417012 AP5Z1O43299 807 aa15.22■□□□□ 0.03
LRRTM1-205ENST00000417012 MAP3K11Q16584 847 aa15.22■□□□□ 0.03
LRRTM1-205ENST00000417012 LARP1BQ659C4 914 aaKnown RBP15.22■□□□□ 0.03
LRRTM1-205ENST00000417012 ERC1Q8IUD2 1116 aa15.22■□□□□ 0.03
LRRTM1-205ENST00000417012 FAM200AQ8TCP9 573 aa15.22■□□□□ 0.03
LRRTM1-205ENST00000417012 EVI5LQ96CN4 794 aa15.22■□□□□ 0.03
LRRTM1-205ENST00000417012 NUP62CLQ9H1M0 184 aa15.22■□□□□ 0.03
LRRTM1-205ENST00000417012 KCNF1Q9H3M0 494 aa15.22■□□□□ 0.03
LRRTM1-205ENST00000417012 DTNBO60941 627 aa15.22■□□□□ 0.03
LRRTM1-205ENST00000417012 PDIA6Q15084 440 aa15.22■□□□□ 0.03
LRRTM1-205ENST00000417012 NECAB1Q8N987 351 aa15.22■□□□□ 0.03
LRRTM1-205ENST00000417012 MEGF6O75095 1541 aa15.22■□□□□ 0.03
LRRTM1-205ENST00000417012 NPHP3Q7Z494 1330 aa15.22■□□□□ 0.03
LRRTM1-205ENST00000417012 KDM6AO15550 1401 aaPredicted RBP15.22■□□□□ 0.03
LRRTM1-205ENST00000417012 PHKG2P15735 406 aa15.22■□□□□ 0.03
LRRTM1-205ENST00000417012 TATP17735 454 aaPredicted RBP15.22■□□□□ 0.03
LRRTM1-205ENST00000417012 PDCP20941 246 aa15.22■□□□□ 0.03
LRRTM1-205ENST00000417012 ST3GAL1Q11201 340 aa15.22■□□□□ 0.03
LRRTM1-205ENST00000417012 MTX1Q13505 466 aa15.22■□□□□ 0.03
LRRTM1-205ENST00000417012 SLC52A2Q9HAB3 445 aa15.22■□□□□ 0.03
LRRTM1-205ENST00000417012 PRDM4Q9UKN5 801 aa15.22■□□□□ 0.03
LRRTM1-205ENST00000417012 PYCARDQ9ULZ3 195 aa15.22■□□□□ 0.03
LRRTM1-205ENST00000417012 RBM8AQ9Y5S9 174 aaKnown RBP15.22■□□□□ 0.03
LRRTM1-205ENST00000417012 NECTIN1Q15223 517 aa15.21■□□□□ 0.03
LRRTM1-205ENST00000417012 PSMA5P28066 241 aa15.21■□□□□ 0.02
LRRTM1-205ENST00000417012 TTC6Q86TZ1 520 aa15.21■□□□□ 0.02
LRRTM1-205ENST00000417012 ELP1O95163 1332 aa15.21■□□□□ 0.02
LRRTM1-205ENST00000417012 HIP1O00291 1037 aa15.2■□□□□ 0.02
LRRTM1-205ENST00000417012 CREB3L3Q68CJ9 461 aa15.2■□□□□ 0.02
LRRTM1-205ENST00000417012 DDX54Q8TDD1 881 aaKnown RBP15.2■□□□□ 0.02
LRRTM1-205ENST00000417012 TPCN1Q9ULQ1 816 aa15.2■□□□□ 0.02
LRRTM1-205ENST00000417012 CHMP3Q9Y3E7 222 aa15.2■□□□□ 0.02
LRRTM1-205ENST00000417012 OVOS2A0A0G2JMS6 1433 aa15.2■□□□□ 0.02
LRRTM1-205ENST00000417012 BCL2L12Q9HB09 334 aa15.2■□□□□ 0.02
LRRTM1-205ENST00000417012 HDAC5Q9UQL6 1122 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms