RNA–Protein interactions for RNA: ENST00000416242.2

LINC01388-201, Transcript of long intergenic non-protein coding RNA 1388, humanhuman

TSL 3 BASIC

Gene LINC01388, Length 416 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01388-201ENST00000416242 KDM2BQ8NHM5 1336 aa18.4■□□□□ 0.54
LINC01388-201ENST00000416242 ELL2O00472 640 aaPredicted RBP18.39■□□□□ 0.53
LINC01388-201ENST00000416242 DDX58O95786 925 aaKnown RBP18.39■□□□□ 0.53
LINC01388-201ENST00000416242 HOXA10P31260 410 aaPredicted RBP18.39■□□□□ 0.53
LINC01388-201ENST00000416242 C1QTNF8P60827 252 aa18.39■□□□□ 0.53
LINC01388-201ENST00000416242 RASSF7Q02833 373 aa18.39■□□□□ 0.53
LINC01388-201ENST00000416242 GRIPAP1Q4V328 841 aa18.39■□□□□ 0.53
LINC01388-201ENST00000416242 SLC10A5Q5PT55 438 aa18.39■□□□□ 0.53
LINC01388-201ENST00000416242 CC2D2BQ6DHV5 1058 aa18.39■□□□□ 0.53
LINC01388-201ENST00000416242 TSR2Q969E8 191 aaKnown RBP18.39■□□□□ 0.53
LINC01388-201ENST00000416242 STK31Q9BXU1 1019 aa18.39■□□□□ 0.53
LINC01388-201ENST00000416242 SH3TC1Q8TE82 1336 aa18.39■□□□□ 0.53
LINC01388-201ENST00000416242 RTKN2Q8IZC4 609 aa18.38■□□□□ 0.53
LINC01388-201ENST00000416242 C7orf43Q8WVR3 580 aa18.38■□□□□ 0.53
LINC01388-201ENST00000416242 RBM17Q96I25 401 aaKnown RBP18.38■□□□□ 0.53
LINC01388-201ENST00000416242 COL11A2P13942 1736 aaPredicted RBP18.37■□□□□ 0.53
LINC01388-201ENST00000416242 TRIM28Q13263 835 aaKnown RBP18.37■□□□□ 0.53
LINC01388-201ENST00000416242 TWISTNBQ3B726 338 aaPredicted RBP18.37■□□□□ 0.53
LINC01388-201ENST00000416242 RIC3Q7Z5B4 369 aa18.37■□□□□ 0.53
LINC01388-201ENST00000416242 CRAMP1Q96RY5 1269 aa18.37■□□□□ 0.53
LINC01388-201ENST00000416242 TRMT112Q9UI30 125 aaKnown RBP18.37■□□□□ 0.53
LINC01388-201ENST00000416242 ISCA1Q9BUE6 129 aa18.36■□□□□ 0.53
LINC01388-201ENST00000416242 MYH16Q9H6N6 1097 aa18.36■□□□□ 0.53
LINC01388-201ENST00000416242 FANCIQ9NVI1 1328 aa18.36■□□□□ 0.53
LINC01388-201ENST00000416242 ZNF219Q9P2Y4 722 aaPredicted RBP18.36■□□□□ 0.53
LINC01388-201ENST00000416242 HSP90B1P14625 803 aaKnown RBP18.35■□□□□ 0.53
LINC01388-201ENST00000416242 TSPYL6Q8N831 410 aa18.35■□□□□ 0.53
LINC01388-201ENST00000416242 TMX4Q9H1E5 349 aaPredicted RBP18.35■□□□□ 0.53
LINC01388-201ENST00000416242 NUP98P52948 1817 aa18.35■□□□□ 0.53
LINC01388-201ENST00000416242 CCER2I3L3R5 266 aa18.33■□□□□ 0.52
LINC01388-201ENST00000416242 FKBP4Q02790 459 aaKnown RBP eCLIP18.33■□□□□ 0.52
LINC01388-201ENST00000416242 PHAXQ9H814 394 aaKnown RBP18.33■□□□□ 0.52
LINC01388-201ENST00000416242 SALL2Q9Y467 1007 aaPredicted RBP18.33■□□□□ 0.52
LINC01388-201ENST00000416242 SENP3-EIF4A1A0A087X0R7 540 aa18.32■□□□□ 0.52
LINC01388-201ENST00000416242 GLTPD2A6NH11 291 aa18.32■□□□□ 0.52
LINC01388-201ENST00000416242 KIF3CO14782 793 aa18.32■□□□□ 0.52
LINC01388-201ENST00000416242 DPY19L2Q6NUT2 758 aa18.32■□□□□ 0.52
LINC01388-201ENST00000416242 CCDC191Q8NCU4 936 aa18.32■□□□□ 0.52
LINC01388-201ENST00000416242 PPEF1O14829 653 aaPredicted RBP18.31■□□□□ 0.52
LINC01388-201ENST00000416242 PRELPP51888 382 aa18.31■□□□□ 0.52
LINC01388-201ENST00000416242 PSMD1Q99460 953 aa18.31■□□□□ 0.52
LINC01388-201ENST00000416242 TNRC6CQ9HCJ0 1690 aaKnown RBP18.31■□□□□ 0.52
LINC01388-201ENST00000416242 ARFGEF2Q9Y6D5 1785 aa18.3■□□□□ 0.52
LINC01388-201ENST00000416242 ATP5J2-PTCD1G3V325 749 aa18.3■□□□□ 0.52
LINC01388-201ENST00000416242 BBOX1O75936 387 aa18.3■□□□□ 0.52
LINC01388-201ENST00000416242 HCLS1P14317 486 aaPredicted RBP18.3■□□□□ 0.52
LINC01388-201ENST00000416242 KSR2Q6VAB6 950 aa18.3■□□□□ 0.52
LINC01388-201ENST00000416242 DDX46Q7L014 1031 aaKnown RBP18.3■□□□□ 0.52
LINC01388-201ENST00000416242 TMC4Q7Z404 712 aa18.3■□□□□ 0.52
LINC01388-201ENST00000416242 C16orf71Q8IYS4 520 aaPredicted RBP18.3■□□□□ 0.52
LINC01388-201ENST00000416242 ZBTB38Q8NAP3 1195 aaPredicted RBP18.3■□□□□ 0.52
LINC01388-201ENST00000416242 METTL22Q9BUU2 404 aaPredicted RBP18.3■□□□□ 0.52
LINC01388-201ENST00000416242 TOMM70O94826 608 aa18.29■□□□□ 0.52
LINC01388-201ENST00000416242 SLC4A2P04920 1241 aa18.29■□□□□ 0.52
LINC01388-201ENST00000416242 NEXNQ0ZGT2 675 aa18.29■□□□□ 0.52
LINC01388-201ENST00000416242 C3orf67Q6ZVT6 689 aa18.29■□□□□ 0.52
LINC01388-201ENST00000416242 NMRK2Q9NPI5 230 aa18.29■□□□□ 0.52
LINC01388-201ENST00000416242 SLX4Q8IY92 1834 aa18.28■□□□□ 0.52
LINC01388-201ENST00000416242 FAM89AQ96GI7 184 aa18.28■□□□□ 0.52
LINC01388-201ENST00000416242 MYD88Q99836 296 aa18.28■□□□□ 0.52
LINC01388-201ENST00000416242 CWC25Q9NXE8 425 aaPredicted RBP18.28■□□□□ 0.52
LINC01388-201ENST00000416242 ATP6V0A2Q9Y487 856 aa18.28■□□□□ 0.52
LINC01388-201ENST00000416242 ABCC4O15439 1325 aa18.27■□□□□ 0.52
LINC01388-201ENST00000416242 ZNF521Q96K83 1311 aa18.27■□□□□ 0.52
LINC01388-201ENST00000416242 PI4KAP2A4QPH2 592 aa18.27■□□□□ 0.52
LINC01388-201ENST00000416242 VAMP4O75379 141 aa18.27■□□□□ 0.52
LINC01388-201ENST00000416242 GRAPQ13588 217 aa18.27■□□□□ 0.52
LINC01388-201ENST00000416242 SF3B3Q15393 1217 aaKnown RBP18.27■□□□□ 0.52
LINC01388-201ENST00000416242 PI4KAP1Q8N8J0 262 aa18.27■□□□□ 0.52
LINC01388-201ENST00000416242 GRAPLQ8TC17 118 aaPredicted RBP18.27■□□□□ 0.52
LINC01388-201ENST00000416242 MAP3K2Q9Y2U5 619 aa18.27■□□□□ 0.52
LINC01388-201ENST00000416242 ANKRD36CQ5JPF3 1778 aa18.27■□□□□ 0.51
LINC01388-201ENST00000416242 SNED1Q8TER0 1413 aa18.26■□□□□ 0.51
LINC01388-201ENST00000416242 IRS4O14654 1257 aaPredicted RBP18.26■□□□□ 0.51
LINC01388-201ENST00000416242 PCCAP05165 728 aaPredicted RBP18.26■□□□□ 0.51
LINC01388-201ENST00000416242 VEGFAP15692 232 aaPredicted RBP18.26■□□□□ 0.51
LINC01388-201ENST00000416242 IARSP41252 1262 aaKnown RBP18.26■□□□□ 0.51
LINC01388-201ENST00000416242 EXOSC9Q06265 439 aaKnown RBP18.26■□□□□ 0.51
LINC01388-201ENST00000416242 FLIIQ13045 1269 aa18.26■□□□□ 0.51
LINC01388-201ENST00000416242 SYNE4Q8N205 404 aa18.26■□□□□ 0.51
LINC01388-201ENST00000416242 RBM46Q8TBY0 533 aaKnown RBP18.26■□□□□ 0.51
LINC01388-201ENST00000416242 VPS33BQ9H267 617 aa18.26■□□□□ 0.51
LINC01388-201ENST00000416242 ZNF277Q9NRM2 450 aaPredicted RBP18.26■□□□□ 0.51
LINC01388-201ENST00000416242 FER1L6Q2WGJ9 1857 aa18.25■□□□□ 0.51
LINC01388-201ENST00000416242 OLFM4Q6UX06 510 aa18.25■□□□□ 0.51
LINC01388-201ENST00000416242 SUPT20HQ8NEM7 779 aa18.25■□□□□ 0.51
LINC01388-201ENST00000416242 E9PSI1 815 aa18.24■□□□□ 0.51
LINC01388-201ENST00000416242 SP8Q8IXZ3 490 aa18.24■□□□□ 0.51
LINC01388-201ENST00000416242 JDP2Q8WYK2 163 aa18.24■□□□□ 0.51
LINC01388-201ENST00000416242 RRAGCQ9HB90 399 aa18.24■□□□□ 0.51
LINC01388-201ENST00000416242 SPINK5Q9NQ38 1064 aaPredicted RBP18.24■□□□□ 0.51
LINC01388-201ENST00000416242 SBF1O95248 1867 aa18.23■□□□□ 0.51
LINC01388-201ENST00000416242 TCERG1O14776 1098 aaKnown RBP18.23■□□□□ 0.51
LINC01388-201ENST00000416242 FSTL1Q12841 308 aa18.23■□□□□ 0.51
LINC01388-201ENST00000416242 FKBP5Q13451 457 aaPredicted RBP18.23■□□□□ 0.51
LINC01388-201ENST00000416242 CDHR2Q9BYE9 1310 aa18.23■□□□□ 0.51
LINC01388-201ENST00000416242 IQCA1LA6NCM1 817 aa18.22■□□□□ 0.51
LINC01388-201ENST00000416242 PDE8AO60658 829 aa18.22■□□□□ 0.51
LINC01388-201ENST00000416242 CCDC152Q4G0S7 254 aa18.22■□□□□ 0.51
LINC01388-201ENST00000416242 FZD9O00144 591 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms