RNA–Protein interactions for RNA: ENST00000416188.2

PHRF1-203, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PHRF1, Length 5,227 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-203ENST00000416188 CFAP45Q9UL16 551 aa18.25■□□□□ 0.51
PHRF1-203ENST00000416188 ZNHIT6Q9NWK9 470 aaKnown RBP18.25■□□□□ 0.51
PHRF1-203ENST00000416188 SEC63Q9UGP8 760 aaKnown RBP18.25■□□□□ 0.51
PHRF1-203ENST00000416188 NKTRP30414 1462 aaKnown RBP18.25■□□□□ 0.51
PHRF1-203ENST00000416188 HMGN5P82970 282 aaKnown RBP18.25■□□□□ 0.51
PHRF1-203ENST00000416188 GJA3Q9Y6H8 435 aa18.25■□□□□ 0.51
PHRF1-203ENST00000416188 GOLIM4O00461 696 aa18.25■□□□□ 0.51
PHRF1-203ENST00000416188 CCP110O43303 1012 aa18.25■□□□□ 0.51
PHRF1-203ENST00000416188 VEZTQ9HBM0 779 aa18.25■□□□□ 0.51
PHRF1-203ENST00000416188 TRIM27P14373 513 aa18.24■□□□□ 0.51
PHRF1-203ENST00000416188 ATP2B3Q16720 1220 aa18.24■□□□□ 0.51
PHRF1-203ENST00000416188 ZNF790Q6PG37 636 aa18.24■□□□□ 0.51
PHRF1-203ENST00000416188 PPFIBP1Q86W92 1011 aa18.24■□□□□ 0.51
PHRF1-203ENST00000416188 CCDC87Q9NVE4 849 aa18.24■□□□□ 0.51
PHRF1-203ENST00000416188 GRM8O00222 908 aa18.24■□□□□ 0.51
PHRF1-203ENST00000416188 IBSPP21815 317 aaPredicted RBP18.24■□□□□ 0.51
PHRF1-203ENST00000416188 IQCA1Q86XH1 822 aa18.24■□□□□ 0.51
PHRF1-203ENST00000416188 NOL7Q9UMY1 257 aaKnown RBP18.24■□□□□ 0.51
PHRF1-203ENST00000416188 ALDH1L1O75891 902 aa18.24■□□□□ 0.51
PHRF1-203ENST00000416188 NUP62CLQ9H1M0 184 aa18.24■□□□□ 0.51
PHRF1-203ENST00000416188 ZGPATQ8N5A5 531 aaKnown RBP18.24■□□□□ 0.51
PHRF1-203ENST00000416188 METP08581 1390 aa18.24■□□□□ 0.51
PHRF1-203ENST00000416188 H0YIN7 160 aa18.23■□□□□ 0.51
PHRF1-203ENST00000416188 STIM1Q13586 685 aa18.23■□□□□ 0.51
PHRF1-203ENST00000416188 SAMD9LQ8IVG5 1584 aa18.23■□□□□ 0.51
PHRF1-203ENST00000416188 PRPF40BQ6NWY9 871 aaKnown RBP18.23■□□□□ 0.51
PHRF1-203ENST00000416188 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.23■□□□□ 0.511e-6■■■■■ 71
PHRF1-203ENST00000416188 RBM10P98175 930 aaKnown RBP18.23■□□□□ 0.51
PHRF1-203ENST00000416188 SKIDA1Q1XH10 827 aa18.23■□□□□ 0.51
PHRF1-203ENST00000416188 ERCC4Q92889 916 aaPredicted RBP18.23■□□□□ 0.51
PHRF1-203ENST00000416188 PHACTR3Q96KR7 559 aa18.23■□□□□ 0.51
PHRF1-203ENST00000416188 DACH1Q9UI36 760 aa18.23■□□□□ 0.51
PHRF1-203ENST00000416188 SLC4A8Q2Y0W8 1093 aa18.22■□□□□ 0.51
PHRF1-203ENST00000416188 MBD5Q9P267 1494 aa18.22■□□□□ 0.51
PHRF1-203ENST00000416188 CCDC83Q8IWF9 413 aa18.22■□□□□ 0.51
PHRF1-203ENST00000416188 FAM177A1Q8N128 213 aaPredicted RBP18.22■□□□□ 0.51
PHRF1-203ENST00000416188 C8orf58Q8NAV2 365 aa18.22■□□□□ 0.51
PHRF1-203ENST00000416188 RNF41Q9H4P4 317 aaPredicted RBP18.22■□□□□ 0.51
PHRF1-203ENST00000416188 TTC37Q6PGP7 1564 aa18.22■□□□□ 0.51
PHRF1-203ENST00000416188 SSBP05455 408 aaKnown RBP eCLIP18.22■□□□□ 0.51
PHRF1-203ENST00000416188 FILIP1Q7Z7B0 1213 aa18.22■□□□□ 0.51
PHRF1-203ENST00000416188 HECW2Q9P2P5 1572 aa18.22■□□□□ 0.51
PHRF1-203ENST00000416188 SYCP1Q15431 976 aa18.21■□□□□ 0.51
PHRF1-203ENST00000416188 MTERF4Q7Z6M4 381 aaKnown RBP18.21■□□□□ 0.51
PHRF1-203ENST00000416188 CEP57L1Q8IYX8 460 aa18.21■□□□□ 0.51
PHRF1-203ENST00000416188 TANGO6Q9C0B7 1094 aa18.21■□□□□ 0.51
PHRF1-203ENST00000416188 ARHGEF5Q12774 1597 aa18.21■□□□□ 0.51
PHRF1-203ENST00000416188 MAGI3Q5TCQ9 1506 aa18.21■□□□□ 0.51
PHRF1-203ENST00000416188 FAM196AQ6ZSG2 479 aa18.21■□□□□ 0.51
PHRF1-203ENST00000416188 LINS1Q8NG48 757 aa18.21■□□□□ 0.51
PHRF1-203ENST00000416188 ARHGEF12Q9NZN5 1544 aa18.21■□□□□ 0.51
PHRF1-203ENST00000416188 PARP10Q53GL7 1025 aa18.21■□□□□ 0.51
PHRF1-203ENST00000416188 MSL1Q68DK7 614 aa18.21■□□□□ 0.51
PHRF1-203ENST00000416188 KRT27Q7Z3Y8 459 aa18.21■□□□□ 0.51
PHRF1-203ENST00000416188 CTCFLQ8NI51 663 aaPredicted RBP18.21■□□□□ 0.51
PHRF1-203ENST00000416188 MAP7D2Q96T17 732 aa18.2■□□□□ 0.5
PHRF1-203ENST00000416188 ECHDC1Q9NTX5 307 aa18.2■□□□□ 0.5
PHRF1-203ENST00000416188 TRIM37O94972 964 aa18.2■□□□□ 0.5
PHRF1-203ENST00000416188 DNAJC10Q8IXB1 793 aa18.2■□□□□ 0.5
PHRF1-203ENST00000416188 FLAD1Q8NFF5 587 aa18.2■□□□□ 0.5
PHRF1-203ENST00000416188 CRNKL1Q9BZJ0 848 aaKnown RBP18.2■□□□□ 0.5
PHRF1-203ENST00000416188 SLC52A2Q9HAB3 445 aa18.2■□□□□ 0.5
PHRF1-203ENST00000416188 ZNF213O14771 459 aa18.2■□□□□ 0.5
PHRF1-203ENST00000416188 ANKRD2Q9GZV1 360 aa18.2■□□□□ 0.5
PHRF1-203ENST00000416188 DEF6Q9H4E7 631 aa18.2■□□□□ 0.5
PHRF1-203ENST00000416188 HELBQ8NG08 1087 aaPredicted RBP18.19■□□□□ 0.5
PHRF1-203ENST00000416188 POLR3AO14802 1390 aaPredicted RBP18.18■□□□□ 0.5
PHRF1-203ENST00000416188 SYCE3A1L190 88 aa18.18■□□□□ 0.5
PHRF1-203ENST00000416188 PDE4BQ07343 736 aa18.18■□□□□ 0.5
PHRF1-203ENST00000416188 PICALMQ13492 652 aa18.18■□□□□ 0.5
PHRF1-203ENST00000416188 TNIP1Q15025 636 aa18.18■□□□□ 0.5
PHRF1-203ENST00000416188 CCDC112Q8NEF3 446 aa18.18■□□□□ 0.5
PHRF1-203ENST00000416188 PDCL3Q9H2J4 239 aa18.18■□□□□ 0.5
PHRF1-203ENST00000416188 KIAA0232Q92628 1395 aa18.18■□□□□ 0.5
PHRF1-203ENST00000416188 IL15P40933 162 aaPredicted RBP18.18■□□□□ 0.5
PHRF1-203ENST00000416188 CERKQ8TCT0 537 aa18.18■□□□□ 0.5
PHRF1-203ENST00000416188 DDX21Q9NR30 783 aaKnown RBP eCLIP18.17■□□□□ 0.5
PHRF1-203ENST00000416188 ERVK-7P63135 1459 aa18.17■□□□□ 0.5
PHRF1-203ENST00000416188 WASF1Q92558 559 aa18.17■□□□□ 0.5
PHRF1-203ENST00000416188 LGR6Q9HBX8 967 aa18.17■□□□□ 0.5
PHRF1-203ENST00000416188 SH3TC1Q8TE82 1336 aa18.17■□□□□ 0.5
PHRF1-203ENST00000416188 CYP7A1P22680 504 aa18.17■□□□□ 0.5
PHRF1-203ENST00000416188 CWF19L2Q2TBE0 894 aaKnown RBP18.17■□□□□ 0.5
PHRF1-203ENST00000416188 CUL5Q93034 780 aa18.17■□□□□ 0.5
PHRF1-203ENST00000416188 A1BGP04217 495 aa18.17■□□□□ 0.5
PHRF1-203ENST00000416188 CAMK4Q16566 473 aa18.17■□□□□ 0.5
PHRF1-203ENST00000416188 BCS1LQ9Y276 419 aa18.17■□□□□ 0.5
PHRF1-203ENST00000416188 TSPY2A6NKD2 308 aa18.16■□□□□ 0.5
PHRF1-203ENST00000416188 EIF6P56537 245 aaKnown RBP18.16■□□□□ 0.5
PHRF1-203ENST00000416188 MYO6Q9UM54 1294 aa18.16■□□□□ 0.5
PHRF1-203ENST00000416188 KRT24Q2M2I5 525 aa18.16■□□□□ 0.5
PHRF1-203ENST00000416188 NOM1Q5C9Z4 860 aaKnown RBP18.16■□□□□ 0.5
PHRF1-203ENST00000416188 AXDND1Q5T1B0 1012 aaPredicted RBP18.16■□□□□ 0.5
PHRF1-203ENST00000416188 FAM182BQ5T319 152 aa18.16■□□□□ 0.5
PHRF1-203ENST00000416188 LARGE2Q8N3Y3 721 aa18.16■□□□□ 0.5
PHRF1-203ENST00000416188 MAP3K11Q16584 847 aa18.16■□□□□ 0.5
PHRF1-203ENST00000416188 SCLT1Q96NL6 688 aa18.16■□□□□ 0.5
PHRF1-203ENST00000416188 CBFA2T2O43439 604 aa18.16■□□□□ 0.5
PHRF1-203ENST00000416188 IL13P35225 146 aa18.16■□□□□ 0.5
PHRF1-203ENST00000416188 RDXP35241 583 aaKnown RBP18.16■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 86.8 ms