RNA–Protein interactions for RNA: ENST00000416108.5

RBM39-208, Transcript of RNA binding motif protein 39, humanhuman

TSL 4

Gene RBM39, Length 577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-208ENST00000416108 SRP68Q9UHB9 627 aaKnown RBP10.52□□□□□ -0.73
RBM39-208ENST00000416108 DDX60Q8IY21 1712 aaKnown RBP10.52□□□□□ -0.73
RBM39-208ENST00000416108 NPHP1O15259 732 aa10.51□□□□□ -0.73
RBM39-208ENST00000416108 HMMRO75330 724 aa10.51□□□□□ -0.73
RBM39-208ENST00000416108 HSP90B1P14625 803 aaKnown RBP10.51□□□□□ -0.73
RBM39-208ENST00000416108 TRIM28Q13263 835 aaKnown RBP10.51□□□□□ -0.73
RBM39-208ENST00000416108 SLC15A2Q16348 729 aa10.51□□□□□ -0.73
RBM39-208ENST00000416108 B4GALNT3Q6L9W6 998 aa10.51□□□□□ -0.73
RBM39-208ENST00000416108 BICDL1Q6ZP65 573 aa10.51□□□□□ -0.73
RBM39-208ENST00000416108 SMIM5Q71RC9 77 aa10.51□□□□□ -0.73
RBM39-208ENST00000416108 UBE3BQ7Z3V4 1068 aa10.51□□□□□ -0.73
RBM39-208ENST00000416108 ZNF34Q8IZ26 560 aa10.51□□□□□ -0.73
RBM39-208ENST00000416108 UPF1Q92900 1129 aaKnown RBP eCLIP10.51□□□□□ -0.73
RBM39-208ENST00000416108 SETDB2Q96T68 719 aa10.51□□□□□ -0.73
RBM39-208ENST00000416108 RWDD1Q9H446 243 aaPredicted RBP10.51□□□□□ -0.73
RBM39-208ENST00000416108 SPEF2Q9C093 1822 aa10.5□□□□□ -0.73
RBM39-208ENST00000416108 FAM177BA6PVY3 158 aa10.5□□□□□ -0.73
RBM39-208ENST00000416108 PCCAP05165 728 aaPredicted RBP10.5□□□□□ -0.73
RBM39-208ENST00000416108 NBPF7P0C2Y1 421 aaPredicted RBP10.5□□□□□ -0.73
RBM39-208ENST00000416108 GTF2E1P29083 439 aaPredicted RBP10.5□□□□□ -0.73
RBM39-208ENST00000416108 NLRP10Q86W26 655 aa10.5□□□□□ -0.73
RBM39-208ENST00000416108 RPAP2Q8IXW5 612 aaPredicted RBP10.5□□□□□ -0.73
RBM39-208ENST00000416108 UTP14AQ9BVJ6 771 aaKnown RBP10.5□□□□□ -0.73
RBM39-208ENST00000416108 NYXQ9GZU5 481 aa10.5□□□□□ -0.73
RBM39-208ENST00000416108 TRMT112Q9UI30 125 aaKnown RBP10.5□□□□□ -0.73
RBM39-208ENST00000416108 LRRFIP2Q9Y608 721 aaKnown RBP10.5□□□□□ -0.73
RBM39-208ENST00000416108 UTYO14607 1347 aa10.5□□□□□ -0.73
RBM39-208ENST00000416108 RTL5Q5HYW3 569 aaPredicted RBP10.49□□□□□ -0.73
RBM39-208ENST00000416108 TBC1D9BQ66K14 1250 aa10.49□□□□□ -0.73
RBM39-208ENST00000416108 AMIGO3Q86WK7 504 aa10.49□□□□□ -0.73
RBM39-208ENST00000416108 ZBTB38Q8NAP3 1195 aaPredicted RBP10.49□□□□□ -0.73
RBM39-208ENST00000416108 PNPLA7Q6ZV29 1317 aa10.49□□□□□ -0.73
RBM39-208ENST00000416108 SH3TC1Q8TE82 1336 aa10.49□□□□□ -0.73
RBM39-208ENST00000416108 CDHR2Q9BYE9 1310 aa10.49□□□□□ -0.73
RBM39-208ENST00000416108 CARMIL3Q8ND23 1372 aa10.49□□□□□ -0.73
RBM39-208ENST00000416108 H7C1W4 665 aa10.48□□□□□ -0.73
RBM39-208ENST00000416108 SUSD4Q5VX71 490 aa10.48□□□□□ -0.73
RBM39-208ENST00000416108 CEP85Q6P2H3 762 aa10.48□□□□□ -0.73
RBM39-208ENST00000416108 NBPF5PQ86XG9 351 aaPredicted RBP10.48□□□□□ -0.73
RBM39-208ENST00000416108 COL23A1Q86Y22 540 aaPredicted RBP10.48□□□□□ -0.73
RBM39-208ENST00000416108 NLGN1Q8N2Q7 840 aa10.48□□□□□ -0.73
RBM39-208ENST00000416108 ANKRD44Q8N8A2 993 aa10.48□□□□□ -0.73
RBM39-208ENST00000416108 JARID2Q92833 1246 aaPredicted RBP10.48□□□□□ -0.73
RBM39-208ENST00000416108 SUCLG2Q96I99 432 aa10.48□□□□□ -0.73
RBM39-208ENST00000416108 BCL2L12Q9HB09 334 aa10.48□□□□□ -0.73
RBM39-208ENST00000416108 ANO8Q9HCE9 1232 aaPredicted RBP10.48□□□□□ -0.73
RBM39-208ENST00000416108 PCDHB15Q9Y5E8 787 aa10.48□□□□□ -0.73
RBM39-208ENST00000416108 UBN2Q6ZU65 1347 aa10.48□□□□□ -0.73
RBM39-208ENST00000416108 IRS4O14654 1257 aaPredicted RBP10.47□□□□□ -0.73
RBM39-208ENST00000416108 GYS1P13807 737 aa10.47□□□□□ -0.73
RBM39-208ENST00000416108 ATP8B2P98198 1209 aa10.47□□□□□ -0.73
RBM39-208ENST00000416108 TPTE2Q6XPS3 522 aa10.47□□□□□ -0.73
RBM39-208ENST00000416108 CENPQQ7L2Z9 268 aaPredicted RBP10.47□□□□□ -0.73
RBM39-208ENST00000416108 ZBTB47Q9UFB7 747 aaPredicted RBP10.47□□□□□ -0.73
RBM39-208ENST00000416108 CHMP3Q9Y3E7 222 aa10.47□□□□□ -0.73
RBM39-208ENST00000416108 CACNA1SQ13698 1873 aa10.47□□□□□ -0.73
RBM39-208ENST00000416108 PDE8AO60658 829 aa10.46□□□□□ -0.73
RBM39-208ENST00000416108 NTSR2O95665 410 aa10.46□□□□□ -0.73
RBM39-208ENST00000416108 HDAC1Q13547 482 aaPredicted RBP10.46□□□□□ -0.73
RBM39-208ENST00000416108 NFIXQ14938 502 aa10.46□□□□□ -0.73
RBM39-208ENST00000416108 FAM89AQ96GI7 184 aa10.46□□□□□ -0.73
RBM39-208ENST00000416108 BICC1Q9H694 974 aaKnown RBP10.46□□□□□ -0.73
RBM39-208ENST00000416108 NRXN2Q9P2S2 1712 aa10.46□□□□□ -0.74
RBM39-208ENST00000416108 SRGAP3O43295 1099 aa10.45□□□□□ -0.74
RBM39-208ENST00000416108 CASP7P55210 303 aa10.45□□□□□ -0.74
RBM39-208ENST00000416108 ST5P78524 1137 aa10.45□□□□□ -0.74
RBM39-208ENST00000416108 CNBD1Q8NA66 436 aa10.45□□□□□ -0.74
RBM39-208ENST00000416108 GCC1Q96CN9 775 aa10.45□□□□□ -0.74
RBM39-208ENST00000416108 PLA2G12BQ9BX93 195 aa10.45□□□□□ -0.74
RBM39-208ENST00000416108 PARP3Q9Y6F1 533 aa10.45□□□□□ -0.74
RBM39-208ENST00000416108 EP400Q96L91 3159 aa10.45□□□□□ -0.74
RBM39-208ENST00000416108 ANKRD31Q8N7Z5 1873 aa10.44□□□□□ -0.74
RBM39-208ENST00000416108 SERPINB2P05120 415 aa10.44□□□□□ -0.74
RBM39-208ENST00000416108 OS9Q13438 667 aaPredicted RBP10.44□□□□□ -0.74
RBM39-208ENST00000416108 MTX1Q13505 466 aa10.44□□□□□ -0.74
RBM39-208ENST00000416108 TAF7LQ5H9L4 462 aa10.44□□□□□ -0.74
RBM39-208ENST00000416108 LMBR1LQ6UX01 489 aa10.44□□□□□ -0.74
RBM39-208ENST00000416108 NUTM1Q86Y26 1132 aa10.44□□□□□ -0.74
RBM39-208ENST00000416108 SLC16A10Q8TF71 515 aa10.44□□□□□ -0.74
RBM39-208ENST00000416108 TAF1P21675 1872 aa10.44□□□□□ -0.74
RBM39-208ENST00000416108 TNRC6CQ9HCJ0 1690 aaKnown RBP10.44□□□□□ -0.74
RBM39-208ENST00000416108 PNMA6EA0A0J9YXQ4 647 aa10.43□□□□□ -0.74
RBM39-208ENST00000416108 IGHDP01880 384 aa10.43□□□□□ -0.74
RBM39-208ENST00000416108 CTSWP56202 376 aa10.43□□□□□ -0.74
RBM39-208ENST00000416108 CCDC57Q2TAC2 916 aa10.43□□□□□ -0.74
RBM39-208ENST00000416108 RABL6Q3YEC7 729 aaPredicted RBP10.43□□□□□ -0.74
RBM39-208ENST00000416108 ERFEQ4G0M1 354 aa10.43□□□□□ -0.74
RBM39-208ENST00000416108 CCDC152Q4G0S7 254 aa10.43□□□□□ -0.74
RBM39-208ENST00000416108 HSP90AB4PQ58FF6 505 aa10.43□□□□□ -0.74
RBM39-208ENST00000416108 EPHA10Q5JZY3 1008 aa10.43□□□□□ -0.74
RBM39-208ENST00000416108 MSL1Q68DK7 614 aa10.43□□□□□ -0.74
RBM39-208ENST00000416108 ILDR2Q71H61 639 aa10.43□□□□□ -0.74
RBM39-208ENST00000416108 SSH3Q8TE77 659 aa10.43□□□□□ -0.74
RBM39-208ENST00000416108 NLRP3Q96P20 1036 aa10.43□□□□□ -0.74
RBM39-208ENST00000416108 ANKRD18BA2A2Z9 1011 aa10.42□□□□□ -0.74
RBM39-208ENST00000416108 SURF6O75683 361 aaKnown RBP10.42□□□□□ -0.74
RBM39-208ENST00000416108 MMP10P09238 476 aa10.42□□□□□ -0.74
RBM39-208ENST00000416108 HCLS1P14317 486 aaPredicted RBP10.42□□□□□ -0.74
RBM39-208ENST00000416108 TM4SF1P30408 202 aa10.42□□□□□ -0.74
RBM39-208ENST00000416108 FOXO4P98177 505 aa10.42□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms