RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 A0A1W2PP64 1363 aa14.97□□□□□ -0.01
SCN1B-202ENST00000415950 CWF19L2Q2TBE0 894 aaKnown RBP14.96□□□□□ -0.01
SCN1B-202ENST00000415950 UBE3BQ7Z3V4 1068 aa14.96□□□□□ -0.01
SCN1B-202ENST00000415950 MARCKSP29966 332 aaPredicted RBP14.96□□□□□ -0.01
SCN1B-202ENST00000415950 KIF6Q6ZMV9 814 aa14.96□□□□□ -0.01
SCN1B-202ENST00000415950 GNG11P61952 73 aa14.96□□□□□ -0.01
SCN1B-202ENST00000415950 LRMPQ12912 555 aa14.96□□□□□ -0.01
SCN1B-202ENST00000415950 MPHOSPH8Q99549 860 aa14.96□□□□□ -0.01
SCN1B-202ENST00000415950 ABCF2Q9UG63 623 aa14.96□□□□□ -0.01
SCN1B-202ENST00000415950 USP16Q9Y5T5 823 aa14.96□□□□□ -0.01
SCN1B-202ENST00000415950 CABP4P57796 275 aa14.96□□□□□ -0.02
SCN1B-202ENST00000415950 GTF3C6Q969F1 213 aa14.96□□□□□ -0.02
SCN1B-202ENST00000415950 EVI5LQ96CN4 794 aa14.96□□□□□ -0.02
SCN1B-202ENST00000415950 LUC7LQ9NQ29 371 aaKnown RBP14.96□□□□□ -0.02
SCN1B-202ENST00000415950 TATP17735 454 aaPredicted RBP14.95□□□□□ -0.02
SCN1B-202ENST00000415950 KLHL34Q8N239 644 aa14.95□□□□□ -0.02
SCN1B-202ENST00000415950 ACEP12821 1306 aa14.95□□□□□ -0.02
SCN1B-202ENST00000415950 A0A087WZG4 1122 aa14.95□□□□□ -0.02
SCN1B-202ENST00000415950 KLHDC4Q8TBB5 520 aa14.95□□□□□ -0.02
SCN1B-202ENST00000415950 RAI14Q9P0K7 980 aa14.95□□□□□ -0.02
SCN1B-202ENST00000415950 CTNNA3Q9UI47 895 aa14.95□□□□□ -0.02
SCN1B-202ENST00000415950 MSH6P52701 1360 aa14.95□□□□□ -0.02
SCN1B-202ENST00000415950 TRAPPC8Q9Y2L5 1435 aa14.95□□□□□ -0.02
SCN1B-202ENST00000415950 CFAP43Q8NDM7 1665 aa14.95□□□□□ -0.02
SCN1B-202ENST00000415950 IFIT1P09914 478 aaKnown RBP14.95□□□□□ -0.02
SCN1B-202ENST00000415950 LMAN1P49257 510 aa14.94□□□□□ -0.02
SCN1B-202ENST00000415950 IPO4Q8TEX9 1081 aaKnown RBP14.94□□□□□ -0.02
SCN1B-202ENST00000415950 GOLGA8BA8MQT2 603 aa14.94□□□□□ -0.02
SCN1B-202ENST00000415950 CEBPAP49715 358 aaPredicted RBP14.94□□□□□ -0.02
SCN1B-202ENST00000415950 ANAPC15P60006 121 aa14.94□□□□□ -0.02
SCN1B-202ENST00000415950 MCM6Q14566 821 aa14.94□□□□□ -0.02
SCN1B-202ENST00000415950 KRT222Q8N1A0 295 aa14.94□□□□□ -0.02
SCN1B-202ENST00000415950 PPP1R9BQ96SB3 815 aa14.94□□□□□ -0.02
SCN1B-202ENST00000415950 ORC3Q9UBD5 711 aaPredicted RBP14.94□□□□□ -0.02
SCN1B-202ENST00000415950 U3KPZ7 1027 aaPredicted RBP14.94□□□□□ -0.02
SCN1B-202ENST00000415950 KIF14Q15058 1648 aa14.94□□□□□ -0.02
SCN1B-202ENST00000415950 NMIQ13287 307 aaPredicted RBP14.94□□□□□ -0.02
SCN1B-202ENST00000415950 SLC39A6Q13433 755 aa14.94□□□□□ -0.02
SCN1B-202ENST00000415950 CDKL5O76039 1030 aa14.93□□□□□ -0.02
SCN1B-202ENST00000415950 SEPT7Q16181 437 aaKnown RBP14.93□□□□□ -0.02
SCN1B-202ENST00000415950 STX1AQ16623 288 aa14.93□□□□□ -0.02
SCN1B-202ENST00000415950 JAKMIP3Q5VZ66 844 aa14.93□□□□□ -0.02
SCN1B-202ENST00000415950 MICU3Q86XE3 530 aa14.93□□□□□ -0.02
SCN1B-202ENST00000415950 PLCD3Q8N3E9 789 aa14.93□□□□□ -0.02
SCN1B-202ENST00000415950 LIG1P18858 919 aa14.93□□□□□ -0.02
SCN1B-202ENST00000415950 TMEM132AQ24JP5 1023 aa14.93□□□□□ -0.02
SCN1B-202ENST00000415950 SYT10Q6XYQ8 523 aa14.93□□□□□ -0.02
SCN1B-202ENST00000415950 BCL2L12Q9HB09 334 aa14.93□□□□□ -0.02
SCN1B-202ENST00000415950 SOGA3Q5TF21 947 aa14.93□□□□□ -0.02
SCN1B-202ENST00000415950 LARP1Q6PKG0 1096 aaKnown RBP14.93□□□□□ -0.02
SCN1B-202ENST00000415950 Q6ZUG5 572 aa14.93□□□□□ -0.02
SCN1B-202ENST00000415950 DBF4Q9UBU7 674 aaPredicted RBP14.93□□□□□ -0.02
SCN1B-202ENST00000415950 CCDC113Q9H0I3 377 aa14.93□□□□□ -0.02
SCN1B-202ENST00000415950 LRP2BPQ9P2M1 347 aa14.93□□□□□ -0.02
SCN1B-202ENST00000415950 SYCP2Q9BX26 1530 aa14.92□□□□□ -0.02
SCN1B-202ENST00000415950 VGLL3A8MV65 326 aa14.92□□□□□ -0.02
SCN1B-202ENST00000415950 PHACTR2O75167 634 aa14.92□□□□□ -0.02
SCN1B-202ENST00000415950 CNNM3Q8NE01 707 aa14.92□□□□□ -0.02
SCN1B-202ENST00000415950 MYRIPQ8NFW9 859 aa14.92□□□□□ -0.02
SCN1B-202ENST00000415950 GOLGA6L7A0A1B0GV03 622 aa14.92□□□□□ -0.02
SCN1B-202ENST00000415950 MINDY4BA8MYZ0 360 aa14.92□□□□□ -0.02
SCN1B-202ENST00000415950 KIF2AO00139 706 aaPredicted RBP14.92□□□□□ -0.02
SCN1B-202ENST00000415950 ZSCAN12O43309 604 aa14.92□□□□□ -0.02
SCN1B-202ENST00000415950 IMMTQ16891 758 aaKnown RBP14.92□□□□□ -0.02
SCN1B-202ENST00000415950 ZBTB3Q9H5J0 574 aa14.92□□□□□ -0.02
SCN1B-202ENST00000415950 INTS4Q96HW7 963 aaKnown RBP14.91□□□□□ -0.02
SCN1B-202ENST00000415950 CD109Q6YHK3 1445 aa14.91□□□□□ -0.02
SCN1B-202ENST00000415950 KIF5CO60282 957 aa14.91□□□□□ -0.02
SCN1B-202ENST00000415950 A0A087WWV3 80 aa14.91□□□□□ -0.02
SCN1B-202ENST00000415950 OTUD7BQ6GQQ9 843 aa14.91□□□□□ -0.02
SCN1B-202ENST00000415950 FAM227BQ96M60 508 aa14.91□□□□□ -0.02
SCN1B-202ENST00000415950 GNL3LQ9NVN8 582 aaKnown RBP14.91□□□□□ -0.02
SCN1B-202ENST00000415950 PAXBP1Q9Y5B6 917 aa14.91□□□□□ -0.02
SCN1B-202ENST00000415950 NSD2O96028 1365 aa14.91□□□□□ -0.02
SCN1B-202ENST00000415950 A0A1B0GVL5 298 aa14.91□□□□□ -0.02
SCN1B-202ENST00000415950 BRD1O95696 1058 aa14.91□□□□□ -0.02
SCN1B-202ENST00000415950 USP5P45974 858 aa14.91□□□□□ -0.02
SCN1B-202ENST00000415950 CREB3L3Q68CJ9 461 aa14.91□□□□□ -0.02
SCN1B-202ENST00000415950 SIRT2Q8IXJ6 389 aa14.91□□□□□ -0.02
SCN1B-202ENST00000415950 AIDAQ96BJ3 306 aa14.91□□□□□ -0.02
SCN1B-202ENST00000415950 SNX14Q9Y5W7 946 aa14.91□□□□□ -0.02
SCN1B-202ENST00000415950 TAF4BQ92750 862 aa14.9□□□□□ -0.02
SCN1B-202ENST00000415950 CASQ1P31415 396 aa14.9□□□□□ -0.02
SCN1B-202ENST00000415950 USP8P40818 1118 aa14.9□□□□□ -0.02
SCN1B-202ENST00000415950 IFNKQ9P0W0 207 aa14.9□□□□□ -0.02
SCN1B-202ENST00000415950 CEP170Q5SW79 1584 aa14.9□□□□□ -0.02
SCN1B-202ENST00000415950 APOBRQ0VD83 1088 aa14.9□□□□□ -0.02
SCN1B-202ENST00000415950 CCDC129Q6ZRS4 1044 aa14.9□□□□□ -0.02
SCN1B-202ENST00000415950 TOM1L2Q6ZVM7 507 aa14.9□□□□□ -0.02
SCN1B-202ENST00000415950 UNC5CLQ8IV45 518 aa14.9□□□□□ -0.02
SCN1B-202ENST00000415950 EDC3Q96F86 508 aaKnown RBP14.9□□□□□ -0.02
SCN1B-202ENST00000415950 NBPF7P0C2Y1 421 aaPredicted RBP14.89□□□□□ -0.03
SCN1B-202ENST00000415950 RXRAP19793 462 aa14.89□□□□□ -0.03
SCN1B-202ENST00000415950 UBASH3AP57075 661 aa14.89□□□□□ -0.03
SCN1B-202ENST00000415950 BMS1Q14692 1282 aaKnown RBP14.89□□□□□ -0.03
SCN1B-202ENST00000415950 PAF1Q8N7H5 531 aa14.89□□□□□ -0.03
SCN1B-202ENST00000415950 CCDC148Q8NFR7 591 aa14.89□□□□□ -0.03
SCN1B-202ENST00000415950 CCDC12Q8WUD4 166 aaPredicted RBP14.89□□□□□ -0.03
SCN1B-202ENST00000415950 BMP2KQ9NSY1 1161 aaPredicted RBP14.89□□□□□ -0.03
SCN1B-202ENST00000415950 ADGRL1O94910 1474 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms